FFCP PHASE1:Hg19::chr1:202736088..202736104,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10765 | |EntrezGene=10765 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18039 | |HGNC=18039 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UFD3 | |UniProt=Q9UFD3 | ||
|association_with_transcript=77bp_to_AL133040_5end | |association_with_transcript=77bp_to_AL133040_5end | ||
|cluster_id=chr1:202736088..202736104,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_KDM5B_5end | |description=CAGE_peak_6_at_KDM5B_5end | ||
|id=chr1:202736088..202736104,- | |id=chr1:202736088..202736104,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.59e-12;3!CL:0002623;2.59e-12;3!CL:0000622;6.55e-08;5!CL:0000540;8.48e-07;6!CL:0000154;8.48e-07;6!CL:0000404;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.59e-12,3;CL:0002567,2.89e-12,3;CL:0000622,6.55e-08,5;CL:0000540,8.02e-07,6;CL:0000031,8.02e-07,6;CL:0000404,8.02e-07,6;CL:0000154,8.48e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;8.48e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!1.39e-07!22;UBERON:0000079!1.39e-07!22 | |ontology_enrichment_uberon=UBERON:0003101!1.39e-07!22;UBERON:0000079!1.39e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;5.05e-34;1!UBERON:0000014;1.44e-09;4!UBERON:0001044;8.48e-07;6!UBERON:0003293;8.48e-07;6!UBERON:0003294;8.48e-07;6!UBERON:0010047;8.48e-07;6!UBERON:0003408;8.48e-07;6!UBERON:0000167;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.58e-34,1;UBERON:0000014,1.22e-09,4;UBERON:0001044,8.48e-07,6;UBERON:0003293,8.48e-07,6;UBERON:0003294,8.48e-07,6;UBERON:0010047,8.48e-07,6;UBERON:0000167,8.48e-07,6 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.488124115096339,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0.427114777637135,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.386521706326594,0,0,0.487894824518382,0.397589304964456,0.69716365721711,0.207322110030741,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0.329250856225877,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0.264145302039678,0.207328115540772,0.144119953416961,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0.749007023947182,0,0.828831026872071,0.12269149171914,0,0,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.384417447767103,0,0.321707842287215,0,0,0,0,0,0,0.241718899183244,0,0.276242966807689,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0.59873811429845,0,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0.333926115068718,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0.359030577639089,0.217294743844016,0.31900115973192,0.274792780205587,0.533034776018635,0,0.31396051279005,0.166211681900156,0,0,0.167821586975843,0,0,0.632994193584081,0,0,0,0.995261931078505,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0.30607276163049,0.063186579628488,0.751617097072463,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0.0967563312890851,0,0,0.581934098930517,0.264768380074501,0,0,0,0,0.586654148204409,0.160317640503067,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.825236619583403,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0.293104467356165,0,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.366078794705889,0,0.573409195690071,0,0,0,0,0.303298235083296,0.856396000634902,0,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0.147855149989634,0,0.449803112163605,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0.358177682162975,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0,0,0.756215088665154,0,0.161475645631851,0,0.196295437002051,0.11796972334774,0,0.231051332300676,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0.115233987555779,0,0.0679697329768317,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0.47775168788705,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,1.19502933965765,0,0,0,0.170426809518315,0,0,0,0,0.111855431797792,0,0,0,0.205325613712494,1.1598144313382,1.45713297917742,0,0,0.118920090777569,0.11294608203896,0.219881033490858,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0.534434810531121,0.275684698604535,0.50141507858475,7.42631242538746,0.803892390468535,0,0,0,0,0.581300188524055,0.372448285775147,0,0.0636471582781649,0,0.653150243690884,0.342233301085281,0,0.358611026963382,0.332660356546013,0,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.488124115096339,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0.427114777637135,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.386521706326594,0,0,0.487894824518382,0.397589304964456,0.69716365721711,0.207322110030741,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0.329250856225877,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0.264145302039678,0.207328115540772,0.144119953416961,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0.749007023947182,0,0.828831026872071,0.12269149171914,0,0,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.384417447767103,0,0.321707842287215,0,0,0,0,0,0,0.241718899183244,0,0.276242966807689,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0.59873811429845,0,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0.333926115068718,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0.359030577639089,0.217294743844016,0.31900115973192,0.274792780205587,0.533034776018635,0,0.31396051279005,0.166211681900156,0,0,0.167821586975843,0,0,0.632994193584081,0,0,0,0.995261931078505,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0.30607276163049,0.063186579628488,0.751617097072463,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0.0967563312890851,0,0,0.581934098930517,0.264768380074501,0,0,0,0,0.586654148204409,0.160317640503067,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.825236619583403,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0.293104467356165,0,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.366078794705889,0,0.573409195690071,0,0,0,0,0.303298235083296,0.856396000634902,0,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0.147855149989634,0,0.449803112163605,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0.358177682162975,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0,0,0.756215088665154,0,0.161475645631851,0,0.196295437002051,0.11796972334774,0,0.231051332300676,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0.115233987555779,0,0.0679697329768317,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0.47775168788705,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,1.19502933965765,0,0,0,0.170426809518315,0,0,0,0,0.111855431797792,0,0,0,0.205325613712494,1.1598144313382,1.45713297917742,0,0,0.118920090777569,0.11294608203896,0.219881033490858,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0.534434810531121,0.275684698604535,0.50141507858475,7.42631242538746,0.803892390468535,0,0,0,0,0.581300188524055,0.372448285775147,0,0.0636471582781649,0,0.653150243690884,0.342233301085281,0,0.358611026963382,0.332660356546013,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p6@KDM5B | |short_description=p6@KDM5B | ||
}} | }} |
Latest revision as of 20:46, 19 September 2015
Short description: | p6@KDM5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KDM5B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 77bp_to_AL133040_5end |
EntrezGene: | KDM5B |
HGNC: | 18039 |
UniProt: | Q9UFD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.59e-12 | 3 |
light melanocyte | 2.89e-12 | 3 |
acinar cell | 6.55e-08 | 5 |
neuron | 8.02e-07 | 6 |
neuroblast | 8.02e-07 | 6 |
electrically signaling cell | 8.02e-07 | 6 |
protein secreting cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface | 2.58e-34 | 1 |
zone of skin | 1.22e-09 | 4 |
saliva-secreting gland | 8.48e-07 | 6 |
gland of oral region | 8.48e-07 | 6 |
gland of foregut | 8.48e-07 | 6 |
oral gland | 8.48e-07 | 6 |
oral cavity | 8.48e-07 | 6 |