FFCP PHASE1:Hg19::chr12:6484533..6484561,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536176_5end | |association_with_transcript=0bp_to_ENST00000536176_5end | ||
|cluster_id=chr12:6484533..6484561,- | |||
|description=CAGE_peak_3_at_SCNN1A_5end | |description=CAGE_peak_3_at_SCNN1A_5end | ||
|id=chr12:6484533..6484561,- | |id=chr12:6484533..6484561,- | ||
|ontology_enrichment_celltype=CL:0002322;8.55e-08;5 | |ontology_enrichment_celltype=CL:0000066!7.07e-20!254;CL:0000223!1.87e-14!59;CL:0002076!2.98e-13!43;CL:0002368!5.45e-07!13 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;8.55e-08;5 | ||
|ontology_enrichment_disease=DOID:299;1.72e-08;25 | |ontology_enrichment_celltype_v019_2=CL:0000066,2.28e-10,253;CL:0002322,9.01e-08,5;CL:0002076,2.83e-07,42 | ||
|ontology_enrichment_uberon=UBERON:0003135;1.54e-11;11!UBERON:0003101;1.88e-08;22!UBERON:0000079;1.88e-08;22!UBERON:0001041;2.06e-08;14!UBERON:0000473;2.31e-07;8!UBERON:0005178;5.18e-07;34!UBERON:0002224;5.18e-07;34 | |ontology_enrichment_development_v019=UBERON:0009117;3.26e-09;10!UBERON:0005564;3.26e-09;10 | ||
|ontology_enrichment_disease=DOID:305!8.79e-19!106;DOID:0050687!2.25e-12!143;DOID:299!9.26e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.72e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.67e-11,106;DOID:299,2.19e-08,25;DOID:0050687,1.34e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.92e-23!169;UBERON:0000925!5.92e-23!169;UBERON:0006595!5.92e-23!169;UBERON:0004921!8.86e-19!129;UBERON:0004185!8.86e-19!129;UBERON:0001007!1.08e-17!155;UBERON:0001555!1.08e-17!155;UBERON:0007026!1.08e-17!155;UBERON:0000077!1.20e-17!130;UBERON:0000466!1.38e-15!126;UBERON:0000464!3.28e-15!104;UBERON:0001041!5.34e-14!98;UBERON:0001004!5.61e-13!72;UBERON:0005177!7.56e-12!107;UBERON:0000481!1.71e-11!347;UBERON:0000062!3.03e-11!511;UBERON:0000065!9.41e-11!53;UBERON:0005153!3.38e-10!37;UBERON:0000922!4.09e-10!612;UBERON:0005911!6.67e-10!82;UBERON:0003104!1.56e-09!238;UBERON:0009142!1.56e-09!238;UBERON:0003101!2.26e-09!22;UBERON:0000079!2.26e-09!22;UBERON:0005157!2.55e-09!51;UBERON:0006554!3.24e-09!44;UBERON:0001008!8.17e-09!45;UBERON:0007023!9.61e-09!115;UBERON:0003135!1.53e-08!11;UBERON:0005156!2.13e-08!59;UBERON:0000990!2.13e-08!59;UBERON:0005178!2.21e-08!34;UBERON:0002224!2.21e-08!34;UBERON:0001048!2.69e-08!168;UBERON:0002553!3.30e-08!70;UBERON:0000468!3.94e-08!659;UBERON:0005181!6.12e-08!35;UBERON:0002050!9.21e-08!605;UBERON:0005423!9.21e-08!605;UBERON:0000161!9.84e-08!35;UBERON:0008947!1.67e-07!38;UBERON:0003258!1.67e-07!38;UBERON:0000923!2.09e-07!604;UBERON:0005291!2.09e-07!604;UBERON:0006598!2.09e-07!604;UBERON:0002532!2.09e-07!604;UBERON:0000063!2.10e-07!97;UBERON:0000072!3.82e-07!46;UBERON:0002530!4.74e-07!59;UBERON:0002048!5.98e-07!22;UBERON:0000117!5.98e-07!22;UBERON:0000171!5.98e-07!22;UBERON:0000170!5.98e-07!22;UBERON:0005597!5.98e-07!22;UBERON:0000118!5.98e-07!22;UBERON:0000480!6.88e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.54e-11;11!UBERON:0003101;1.88e-08;22!UBERON:0000079;1.88e-08;22!UBERON:0001041;2.06e-08;14!UBERON:0000473;2.31e-07;8!UBERON:0005178;5.18e-07;34!UBERON:0002224;5.18e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.70e-11,11;UBERON:0004119,1.03e-09,160;UBERON:0000925,1.03e-09,160;UBERON:0006595,1.03e-09,160;UBERON:0003133,2.36e-09,48;UBERON:0005156,3.70e-09,59;UBERON:0000990,3.70e-09,59;UBERON:0003101,2.38e-08,22;UBERON:0000079,2.38e-08,22;UBERON:0007023,3.72e-08,114;UBERON:0004921,4.55e-08,118;UBERON:0005153,6.62e-08,37;UBERON:0001004,6.76e-08,74;UBERON:0001041,7.21e-08,87;UBERON:0002553,7.74e-08,61;UBERON:0005178,9.67e-08,34;UBERON:0002224,9.67e-08,34;UBERON:0001007,1.08e-07,145;UBERON:0001555,1.08e-07,145;UBERON:0007026,1.08e-07,145;UBERON:0005181,2.09e-07,35;UBERON:0000473,2.46e-07,8;UBERON:0005177,4.64e-07,101;UBERON:0000065,8.27e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,1.39560233594486,4.36882744260345,3.16520373874144,1.23766352960047,1.32558950291166,0,0,0,0,0.492484232307152,1.83600622119828,0,0,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3187890579341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,1.13441780596881,0.221729397462564,0.87834785693126,19.122945022666,0.728590576585084,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,3.29329006549908,6.09636934278832,2.67246068599892,1.55491582523056,2.01856680700503,0.36497735907583,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0.343135620597051,0.109750285408626,0,0.402115889646523,0.277765335475589,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,12.0008420421817,3.77824120068151,4.21720947081732,0,0,0.207328115540772,0.288239906833923,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,1.08524321078289,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71768088406796,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.587403472388222,0,0,0,0,0.606255142892519,4.99306318531491,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0.200506470303285,2.30202472339741,0.114814448164607,0,0,1.35359883872224,0.231046011313244,0,0,0.73886140225013,0,0,0,0,0.541892875087706,1.00337954770971,3.3133915495855,0.831076008928724,0.895499018888713,0,0,0,0.328014645699706,0,3.91555844261345,0,0,0,0,0,0,0.308097234229289,0,0,0.322260734604821,0.145016693914229,0,0.178064071293475,0.495854746082934,1.15314040419064,2.04180339991335,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,1.34060455107157,0,3.95403963262472,0.43050537267123,1.68471475667626,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0.640944426764839,8.66231869737023,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0.121360521749513,0,0.568272293612826,0,0,0,0,0,0,0,4.01138275443188,3.58646378851925,0.276283915531148,0,0.920418142519393,0,0,0.179736702294654,1.43216939740487,0,3.05794557474494,0,0,0,0.463840490809256,0,0,0,2.89999830173917,1.82069517256799,1.5255219017566,3.78220290828698,0.344743373241465,0,0,0,0,0,0,0,1.97446857438575,0,0,6.30992119731136,0,0.23056390438806,0.359030577639089,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0.37950746544837,0,1.05499032264014,1.79556088975062,0.989471500037586,0,0.995261931078505,0.530745387020035,0.611030144933625,0,0,0,1.7524294574976,0,0,0,3.13063390291344,0.728341138602278,48.9284659533244,1.20990716048664,0,0.63186579628488,0.150323419414493,0,0,0.330991955875499,0,0,2.27687636823834,0,2.08271686002157,3.5277263069176,0.174118413160805,10.1341467580377,0,0,0,0,5.72235197281675,0.176512253383001,0.451961481561065,0,0,0.0633107959558787,3.71547627196126,0,2.77488893161158,0.39961921916426,2.3054466744657,0,0,0,0.124252535565433,7.07082103850386,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0.717873024576814,0.399358000997982,0.429226048136571,0,0,0,1.16495949527454,0.551482276150566,0.494495150286999,0.404421263125109,0.295282444544246,0,0,0.817220436669454,1.60753148465019,1.92555211236127,1.24632101408756,0,0,0,0.335434687599266,62.8869544247601,46.1600375587983,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,2.81926008926669,12.600914682988,5.03053776318931,7.04206394090232,0,0.197611631897944,0,0,0,0,0,0,2.82697373250422,0,0,0,10.3213655224213,7.76503360757966,1.73869928235874,0,0.124980407962107,0,0,0,6.55668868129634,3.4781046866598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,1.18259708457151,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,0.139879507719444,8.08700438042865,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0,0,0.392590874004102,1.65157612686837,0.366857197043358,1.38630799380406,0,0,0,2.85799247727178,0,5.47059807863165,0.261906694481422,0,2.21784129325568,0,0,0,0,0,10.9651553371436,2.48105589194647,0,1.53314913167514,0,1.00885116665647,1.21393120847326,4.55324382702595,0.177404740325278,0,0.171488009437418,0,0,1.06374456795571,0.111231401892069,7.22136454224729,0,2.80272163313789,0,0,0,2.57315559035963,0,2.78979420883501,0,0,0.414432328326074,0.17071847709395,6.22133695632683,70.9875142053458,0,0,48.2661237217659,5.4985648450572,0,0,3.02009665854039,3.4352581765335,8.5342547487588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| ||
|short_description=p3@SCNN1A | |short_description=p3@SCNN1A | ||
}} | }} |
Latest revision as of 20:46, 19 September 2015
Short description: | p3@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCNN1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536176_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.28e-10 | 253 |
embryonic stem cell | 9.01e-08 | 5 |
endo-epithelial cell | 2.83e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.70e-11 | 11 |
endoderm-derived structure | 1.03e-09 | 160 |
endoderm | 1.03e-09 | 160 |
presumptive endoderm | 1.03e-09 | 160 |
reproductive organ | 2.36e-09 | 48 |
reproductive structure | 3.70e-09 | 59 |
reproductive system | 3.70e-09 | 59 |
male organism | 2.38e-08 | 22 |
male reproductive system | 2.38e-08 | 22 |
adult organism | 3.72e-08 | 114 |
subdivision of digestive tract | 4.55e-08 | 118 |
epithelial bud | 6.62e-08 | 37 |
respiratory system | 6.76e-08 | 74 |
foregut | 7.21e-08 | 87 |
anatomical cavity | 7.74e-08 | 61 |
thoracic cavity element | 9.67e-08 | 34 |
thoracic cavity | 9.67e-08 | 34 |
digestive system | 1.08e-07 | 145 |
digestive tract | 1.08e-07 | 145 |
primitive gut | 1.08e-07 | 145 |
thoracic segment organ | 2.09e-07 | 35 |
testis | 2.46e-07 | 8 |
trunk region element | 4.64e-07 | 101 |
respiratory tract | 8.27e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.67e-11 | 106 |
adenocarcinoma | 2.19e-08 | 25 |
cell type cancer | 1.34e-07 | 143 |