FFCP PHASE1:Hg19::chr1:93544791..93544807,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22823 | |EntrezGene=22823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29535 | |HGNC=29535 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y483,B4DZ69,B4DZG1,Q96G26,Q7Z534 | |UniProt=Q9Y483,B4DZ69,B4DZG1,Q96G26,Q7Z534 | ||
|association_with_transcript=0bp_to_ENST00000370298,ENST00000540243,ENST00000545708,NM_001164391,NM_001164392,NM_001164393,NM_007358,uc001dph.2,uc001dpi.3,uc001dpj.3,uc009wdj.2,uc009wdk.2,uc010oth.1,uc010oti.1_5end | |association_with_transcript=0bp_to_ENST00000370298,ENST00000540243,ENST00000545708,NM_001164391,NM_001164392,NM_001164393,NM_007358,uc001dph.2,uc001dpi.3,uc001dpj.3,uc009wdj.2,uc009wdk.2,uc010oth.1,uc010oti.1_5end | ||
|cluster_id=chr1:93544791..93544807,+ | |||
|description=CAGE_peak_2_at_MTF2_5end | |description=CAGE_peak_2_at_MTF2_5end | ||
|id=chr1:93544791..93544807,+ | |id=chr1:93544791..93544807,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.62e-08!172;CL:0000566!4.62e-08!172;CL:0002032!5.25e-08!165;CL:0000837!5.25e-08!165;CL:0000988!2.46e-07!182 | |ontology_enrichment_celltype=CL:0000037!4.62e-08!172;CL:0000566!4.62e-08!172;CL:0002032!5.25e-08!165;CL:0000837!5.25e-08!165;CL:0000988!2.46e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.69e-07;7!CL:0000586;2.69e-07;7!CL:0002322;6.31e-07;5 | |ontology_enrichment_celltype_v019=CL:0000039;2.69e-07;7!CL:0000586;2.69e-07;7!CL:0002322;6.31e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.33e-08,168;CL:0000988,3.56e-08,177;CL:0002032,3.58e-08,161;CL:0000837,3.58e-08,161;CL:0000039,1.49e-07,7;CL:0000586,1.49e-07,7;CL:0000945,6.68e-07,24;CL:0000826,6.68e-07,24;CL:0002322,7.17e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!8.96e-22!235;DOID:14566!1.77e-20!239;DOID:2531!6.72e-19!51;DOID:0060083!6.72e-19!51;DOID:1240!8.95e-17!39;DOID:0050686!6.74e-14!137;DOID:8692!6.17e-13!31;DOID:0050687!8.29e-11!143;DOID:305!2.30e-10!106 | |ontology_enrichment_disease=DOID:162!8.96e-22!235;DOID:14566!1.77e-20!239;DOID:2531!6.72e-19!51;DOID:0060083!6.72e-19!51;DOID:1240!8.95e-17!39;DOID:0050686!6.74e-14!137;DOID:8692!6.17e-13!31;DOID:0050687!8.29e-11!143;DOID:305!2.30e-10!106 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.54e-17;39!DOID:8692;9.50e-16;31!DOID:2531;1.14e-15;51!DOID:0060083;1.14e-15;51!DOID:3095;2.20e-07;22!DOID:2994;2.20e-07;22 | |ontology_enrichment_disease_v019=DOID:1240;1.54e-17;39!DOID:8692;9.50e-16;31!DOID:2531;1.14e-15;51!DOID:0060083;1.14e-15;51!DOID:3095;2.20e-07;22!DOID:2994;2.20e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,7.72e-25,51;DOID:0060083,7.72e-25,51;DOID:1240,1.04e-22,39;DOID:162,1.01e-18,235;DOID:14566,1.22e-17,239;DOID:8692,1.01e-16,31;DOID:0050686,2.11e-16,137;DOID:3095,1.27e-07,22;DOID:2994,1.27e-07,22;DOID:0050687,2.51e-07,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@MTF2 | |short_description=p2@MTF2 | ||
}} | }} |
Latest revision as of 21:11, 19 September 2015
Short description: | p2@MTF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MTF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370298, ENST00000540243, ENST00000545708, NM_001164391, NM_001164392, NM_001164393, NM_007358, uc001dph.2, uc001dpi.3, uc001dpj.3, uc009wdj.2, uc009wdk.2, uc010oth.1, uc010oti.1_5end |
EntrezGene: | MTF2 |
HGNC: | 29535 |
UniProt: | Q9Y483B4DZ69B4DZG1Q96G26Q7Z534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.33e-08 | 168 |
hematopoietic cell | 3.56e-08 | 177 |
hematopoietic oligopotent progenitor cell | 3.58e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.58e-08 | 161 |
germ line cell | 1.49e-07 | 7 |
germ cell | 1.49e-07 | 7 |
lymphocyte of B lineage | 6.68e-07 | 24 |
pro-B cell | 6.68e-07 | 24 |
embryonic stem cell | 7.17e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.72e-25 | 51 |
immune system cancer | 7.72e-25 | 51 |
leukemia | 1.04e-22 | 39 |
cancer | 1.01e-18 | 235 |
disease of cellular proliferation | 1.22e-17 | 239 |
myeloid leukemia | 1.01e-16 | 31 |
organ system cancer | 2.11e-16 | 137 |
germ cell and embryonal cancer | 1.27e-07 | 22 |
germ cell cancer | 1.27e-07 | 22 |
cell type cancer | 2.51e-07 | 143 |