FFCP PHASE1:Hg19::chr6:112115074..112115094,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2534 | |EntrezGene=2534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4037 | |HGNC=4037 | ||
|TSSclassifier=strong | |||
|UniProt=P06241,B3KPS6 | |UniProt=P06241,B3KPS6 | ||
|association_with_transcript=0bp_to_ENST00000368667,ENST00000544792,uc003pvj.2_5end | |association_with_transcript=0bp_to_ENST00000368667,ENST00000544792,uc003pvj.2_5end | ||
|cluster_id=chr6:112115074..112115094,- | |||
|coexpression_cluster_id=C98 | |coexpression_cluster_id=C98 | ||
|description=CAGE_peak_3_at_FYN_5end | |description=CAGE_peak_3_at_FYN_5end | ||
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|ontology_enrichment_celltype=CL:0000738!1.48e-24!140;CL:0000791!4.54e-21!18;CL:0000789!4.54e-21!18;CL:0002420!4.54e-21!18;CL:0002419!4.54e-21!18;CL:0000790!4.54e-21!18;CL:0000037!2.46e-20!172;CL:0000566!2.46e-20!172;CL:0000988!1.40e-19!182;CL:0002087!2.36e-18!119;CL:0002032!2.47e-18!165;CL:0000837!2.47e-18!165;CL:0002031!2.66e-16!124;CL:0000625!3.86e-16!11;CL:0000084!1.96e-13!25;CL:0000827!1.96e-13!25;CL:0000838!3.61e-13!52;CL:0000542!9.54e-13!53;CL:0000051!9.54e-13!53;CL:0000766!6.66e-10!76;CL:0002057!1.47e-08!42;CL:0000094!4.29e-08!8;CL:0000860!1.38e-07!45;CL:0000763!1.53e-07!112;CL:0000049!1.53e-07!112 | |ontology_enrichment_celltype=CL:0000738!1.48e-24!140;CL:0000791!4.54e-21!18;CL:0000789!4.54e-21!18;CL:0002420!4.54e-21!18;CL:0002419!4.54e-21!18;CL:0000790!4.54e-21!18;CL:0000037!2.46e-20!172;CL:0000566!2.46e-20!172;CL:0000988!1.40e-19!182;CL:0002087!2.36e-18!119;CL:0002032!2.47e-18!165;CL:0000837!2.47e-18!165;CL:0002031!2.66e-16!124;CL:0000625!3.86e-16!11;CL:0000084!1.96e-13!25;CL:0000827!1.96e-13!25;CL:0000838!3.61e-13!52;CL:0000542!9.54e-13!53;CL:0000051!9.54e-13!53;CL:0000766!6.66e-10!76;CL:0002057!1.47e-08!42;CL:0000094!4.29e-08!8;CL:0000860!1.38e-07!45;CL:0000763!1.53e-07!112;CL:0000049!1.53e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.55e-38;18!CL:0000789;4.55e-38;18!CL:0002419;4.55e-38;18!CL:0000625;7.99e-32;11!CL:0000084;3.74e-26;25!CL:0000542;4.72e-13;53!CL:0000094;4.30e-12;8!CL:0000623;3.56e-10;3!CL:0000226;2.25e-09;3!CL:0000767;2.25e-09;3!CL:0000842;2.25e-09;3!CL:0000081;1.37e-08;11!CL:0002087;9.14e-08;104!CL:0000624;3.33e-07;6 | |ontology_enrichment_celltype_v019=CL:0000791;4.55e-38;18!CL:0000789;4.55e-38;18!CL:0002419;4.55e-38;18!CL:0000625;7.99e-32;11!CL:0000084;3.74e-26;25!CL:0000542;4.72e-13;53!CL:0000094;4.30e-12;8!CL:0000623;3.56e-10;3!CL:0000226;2.25e-09;3!CL:0000767;2.25e-09;3!CL:0000842;2.25e-09;3!CL:0000081;1.37e-08;11!CL:0002087;9.14e-08;104!CL:0000624;3.33e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.08e-38,18;CL:0000789,3.08e-38,18;CL:0002420,3.08e-38,18;CL:0002419,3.08e-38,18;CL:0000790,3.08e-38,18;CL:0000625,7.70e-32,11;CL:0000838,2.67e-26,52;CL:0000084,2.84e-26,25;CL:0000827,2.84e-26,25;CL:0000542,1.13e-25,53;CL:0000051,1.13e-25,53;CL:0000738,6.00e-23,136;CL:0002087,2.89e-18,115;CL:0000037,1.39e-16,168;CL:0000988,3.22e-15,177;CL:0002031,2.09e-13,120;CL:0002032,2.11e-13,161;CL:0000837,2.11e-13,161;CL:0000094,3.60e-12,8;CL:0000623,3.62e-10,3;CL:0000825,3.62e-10,3;CL:0000226,1.88e-09,3;CL:0000842,1.88e-09,3;CL:0000767,2.10e-09,3;CL:0000081,1.21e-08,11;CL:0000624,2.60e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.55e-38;18!CL:0000051;4.72e-13;53 | |ontology_enrichment_development_v019=CL:0000790;4.55e-38;18!CL:0000051;4.72e-13;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.35e-15!115;UBERON:0002390!2.05e-14!102;UBERON:0003061!2.05e-14!102;UBERON:0002193!1.48e-13!112;UBERON:0000178!2.34e-13!15;UBERON:0000179!2.34e-13!15;UBERON:0000463!2.34e-13!15;UBERON:0004177!1.82e-08!7;UBERON:0002405!1.52e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!6.35e-15!115;UBERON:0002390!2.05e-14!102;UBERON:0003061!2.05e-14!102;UBERON:0002193!1.48e-13!112;UBERON:0000178!2.34e-13!15;UBERON:0000179!2.34e-13!15;UBERON:0000463!2.34e-13!15;UBERON:0004177!1.82e-08!7;UBERON:0002405!1.52e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.07e-20;15!UBERON:0000179;8.07e-20;15!UBERON:0000463;8.07e-20;15!UBERON:0002390;4.56e-13;32!UBERON:0002193;1.62e-09;42!UBERON:0002106;7.03e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.07e-20;15!UBERON:0000179;8.07e-20;15!UBERON:0000463;8.07e-20;15!UBERON:0002390;4.56e-13;32!UBERON:0002193;1.62e-09;42!UBERON:0002106;7.03e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.72e-20,15;UBERON:0000179,7.72e-20,15;UBERON:0000463,7.72e-20,15;UBERON:0004177,8.57e-10,7;UBERON:0005057,8.57e-10,7;UBERON:0002106,7.13e-09,3;UBERON:0004854,7.13e-09,3;UBERON:0009034,7.13e-09,3;UBERON:0002095,7.13e-09,3;UBERON:0004782,7.13e-09,3;UBERON:0003281,7.13e-09,3;UBERON:0009664,7.13e-09,3;UBERON:0002296,7.13e-09,3;UBERON:0005602,7.13e-09,3;UBERON:0001179,7.13e-09,3;UBERON:0006293,7.13e-09,3;UBERON:0002193,4.37e-08,108;UBERON:0002390,1.16e-07,98;UBERON:0003061,1.16e-07,98 | |||
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| ||
|short_description=p3@FYN | |short_description=p3@FYN | ||
}} | }} |
Latest revision as of 21:30, 19 September 2015
Short description: | p3@FYN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FYN_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_ENST00000368667, ENST00000544792, uc003pvj.2_5end |
EntrezGene: | FYN |
HGNC: | 4037 |
UniProt: | P06241B3KPS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.08e-38 | 18 |
alpha-beta T cell | 3.08e-38 | 18 |
immature T cell | 3.08e-38 | 18 |
mature T cell | 3.08e-38 | 18 |
immature alpha-beta T cell | 3.08e-38 | 18 |
CD8-positive, alpha-beta T cell | 7.70e-32 | 11 |
lymphoid lineage restricted progenitor cell | 2.67e-26 | 52 |
T cell | 2.84e-26 | 25 |
pro-T cell | 2.84e-26 | 25 |
lymphocyte | 1.13e-25 | 53 |
common lymphoid progenitor | 1.13e-25 | 53 |
leukocyte | 6.00e-23 | 136 |
nongranular leukocyte | 2.89e-18 | 115 |
hematopoietic stem cell | 1.39e-16 | 168 |
hematopoietic cell | 3.22e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 2.09e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.11e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.11e-13 | 161 |
granulocyte | 3.60e-12 | 8 |
natural killer cell | 3.62e-10 | 3 |
pro-NK cell | 3.62e-10 | 3 |
single nucleate cell | 1.88e-09 | 3 |
mononuclear cell | 1.88e-09 | 3 |
basophil | 2.10e-09 | 3 |
blood cell | 1.21e-08 | 11 |
CD4-positive, alpha-beta T cell | 2.60e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 7.72e-20 | 15 |
haemolymphatic fluid | 7.72e-20 | 15 |
organism substance | 7.72e-20 | 15 |
hemopoietic organ | 8.57e-10 | 7 |
immune organ | 8.57e-10 | 7 |
spleen | 7.13e-09 | 3 |
gastrointestinal system mesentery | 7.13e-09 | 3 |
stomach region | 7.13e-09 | 3 |
mesentery | 7.13e-09 | 3 |
gastrointestinal system serosa | 7.13e-09 | 3 |
mesentery of stomach | 7.13e-09 | 3 |
gut mesentery | 7.13e-09 | 3 |
dorsal mesentery | 7.13e-09 | 3 |
dorsal mesogastrium | 7.13e-09 | 3 |
peritoneal cavity | 7.13e-09 | 3 |
spleen primordium | 7.13e-09 | 3 |
hemolymphoid system | 4.37e-08 | 108 |
hematopoietic system | 1.16e-07 | 98 |
blood island | 1.16e-07 | 98 |