FFCP PHASE1:Hg19::chr7:87849340..87849395,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6717 | |EntrezGene=6717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11292 | |HGNC=11292 | ||
|TSSclassifier=strong | |||
|UniProt=P30626,B4DHQ6,E9PG82 | |UniProt=P30626,B4DHQ6,E9PG82 | ||
|association_with_transcript=0bp_to_ENST00000265729,ENST00000419179,ENST00000457606,ENST00000486860,ENST00000488015,NM_003130,uc003ujq.1,uc010lej.1,uc011khg.1_5end | |association_with_transcript=0bp_to_ENST00000265729,ENST00000419179,ENST00000457606,ENST00000486860,ENST00000488015,NM_003130,uc003ujq.1,uc010lej.1,uc011khg.1_5end | ||
|cluster_id=chr7:87849340..87849395,- | |||
|description=CAGE_peak_1_at_SRI_5end | |description=CAGE_peak_1_at_SRI_5end | ||
|id=chr7:87849340..87849395,- | |id=chr7:87849340..87849395,- | ||
|ontology_enrichment_celltype=CL:0000222!2.13e-13!119;CL:0000220!5.77e-11!246;CL:0002321!6.66e-11!248;CL:0002139!2.31e-09!24;CL:0000071!5.40e-09!18;CL:0002546!5.40e-09!18;CL:0000055!3.76e-08!180;CL:0000213!1.20e-07!57;CL:0000215!1.20e-07!57;CL:0002078!4.39e-07!44;CL:0000115!5.80e-07!35 | |ontology_enrichment_celltype=CL:0000222!2.13e-13!119;CL:0000220!5.77e-11!246;CL:0002321!6.66e-11!248;CL:0002139!2.31e-09!24;CL:0000071!5.40e-09!18;CL:0002546!5.40e-09!18;CL:0000055!3.76e-08!180;CL:0000213!1.20e-07!57;CL:0000215!1.20e-07!57;CL:0002078!4.39e-07!44;CL:0000115!5.80e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.42e-09;24!CL:0000071;5.54e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.55e-14,121;CL:0002321,2.56e-11,250;CL:0002139,2.31e-09,24;CL:0000071,5.40e-09,18;CL:0002546,5.40e-09,18;CL:0000213,6.34e-08,58;CL:0000215,6.34e-08,58;CL:0002078,2.26e-07,45;CL:0000115,2.90e-07,36;CL:0000393,7.34e-07,61;CL:0000211,7.34e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;5.54e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.51e-21!312;UBERON:0000483!1.03e-20!309;UBERON:0000477!9.72e-17!286;UBERON:0000025!1.35e-16!194;UBERON:0001017!4.80e-15!82;UBERON:0005743!6.65e-15!86;UBERON:0001049!7.27e-14!57;UBERON:0005068!7.27e-14!57;UBERON:0006241!7.27e-14!57;UBERON:0007135!7.27e-14!57;UBERON:0004111!8.41e-14!241;UBERON:0000073!2.37e-13!94;UBERON:0001016!2.37e-13!94;UBERON:0002616!9.98e-13!59;UBERON:0000475!1.45e-12!365;UBERON:0000481!1.57e-12!347;UBERON:0003075!3.03e-12!86;UBERON:0007284!3.03e-12!86;UBERON:0002020!3.86e-12!34;UBERON:0003528!3.86e-12!34;UBERON:0001893!5.38e-12!34;UBERON:0000955!6.84e-12!69;UBERON:0006238!6.84e-12!69;UBERON:0001869!1.51e-11!32;UBERON:0002791!1.64e-11!33;UBERON:0000064!1.27e-10!219;UBERON:0002780!1.32e-10!41;UBERON:0001890!1.32e-10!41;UBERON:0006240!1.32e-10!41;UBERON:0000033!1.44e-10!123;UBERON:0002346!1.55e-10!90;UBERON:0003080!3.19e-10!42;UBERON:0004121!3.92e-10!169;UBERON:0003056!6.89e-10!61;UBERON:0006914!1.08e-09!25;UBERON:0000487!3.83e-09!22;UBERON:0000153!4.00e-09!129;UBERON:0007811!4.00e-09!129;UBERON:0000924!4.36e-09!173;UBERON:0006601!4.36e-09!173;UBERON:0001986!5.40e-09!18;UBERON:0004638!5.40e-09!18;UBERON:0004852!5.40e-09!18;UBERON:0000486!1.10e-08!82;UBERON:0000956!1.73e-08!25;UBERON:0000203!1.73e-08!25;UBERON:0002049!2.38e-08!79;UBERON:0007798!2.38e-08!79;UBERON:0000914!2.81e-08!83;UBERON:0002329!2.81e-08!83;UBERON:0003077!2.81e-08!83;UBERON:0003059!2.81e-08!83;UBERON:0007282!2.81e-08!83;UBERON:0009618!2.81e-08!83;UBERON:0007285!2.81e-08!83;UBERON:0003914!4.22e-07!118;UBERON:0004872!6.37e-07!84;UBERON:0000055!6.89e-07!69;UBERON:0002619!8.32e-07!22 | |ontology_enrichment_uberon=UBERON:0000119!3.51e-21!312;UBERON:0000483!1.03e-20!309;UBERON:0000477!9.72e-17!286;UBERON:0000025!1.35e-16!194;UBERON:0001017!4.80e-15!82;UBERON:0005743!6.65e-15!86;UBERON:0001049!7.27e-14!57;UBERON:0005068!7.27e-14!57;UBERON:0006241!7.27e-14!57;UBERON:0007135!7.27e-14!57;UBERON:0004111!8.41e-14!241;UBERON:0000073!2.37e-13!94;UBERON:0001016!2.37e-13!94;UBERON:0002616!9.98e-13!59;UBERON:0000475!1.45e-12!365;UBERON:0000481!1.57e-12!347;UBERON:0003075!3.03e-12!86;UBERON:0007284!3.03e-12!86;UBERON:0002020!3.86e-12!34;UBERON:0003528!3.86e-12!34;UBERON:0001893!5.38e-12!34;UBERON:0000955!6.84e-12!69;UBERON:0006238!6.84e-12!69;UBERON:0001869!1.51e-11!32;UBERON:0002791!1.64e-11!33;UBERON:0000064!1.27e-10!219;UBERON:0002780!1.32e-10!41;UBERON:0001890!1.32e-10!41;UBERON:0006240!1.32e-10!41;UBERON:0000033!1.44e-10!123;UBERON:0002346!1.55e-10!90;UBERON:0003080!3.19e-10!42;UBERON:0004121!3.92e-10!169;UBERON:0003056!6.89e-10!61;UBERON:0006914!1.08e-09!25;UBERON:0000487!3.83e-09!22;UBERON:0000153!4.00e-09!129;UBERON:0007811!4.00e-09!129;UBERON:0000924!4.36e-09!173;UBERON:0006601!4.36e-09!173;UBERON:0001986!5.40e-09!18;UBERON:0004638!5.40e-09!18;UBERON:0004852!5.40e-09!18;UBERON:0000486!1.10e-08!82;UBERON:0000956!1.73e-08!25;UBERON:0000203!1.73e-08!25;UBERON:0002049!2.38e-08!79;UBERON:0007798!2.38e-08!79;UBERON:0000914!2.81e-08!83;UBERON:0002329!2.81e-08!83;UBERON:0003077!2.81e-08!83;UBERON:0003059!2.81e-08!83;UBERON:0007282!2.81e-08!83;UBERON:0009618!2.81e-08!83;UBERON:0007285!2.81e-08!83;UBERON:0003914!4.22e-07!118;UBERON:0004872!6.37e-07!84;UBERON:0000055!6.89e-07!69;UBERON:0002619!8.32e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;9.28e-11;34!UBERON:0002020;9.28e-11;34!UBERON:0001893;1.04e-10;34!UBERON:0001869;1.33e-10;32!UBERON:0002791;2.15e-10;32!UBERON:0006914;1.14e-09;25!UBERON:0000487;4.05e-09;22!UBERON:0004638;5.54e-09;18!UBERON:0001986;5.54e-09;18!UBERON:0004852;5.54e-09;18!UBERON:0000956;1.75e-08;25!UBERON:0000203;1.75e-08;25!UBERON:0002780;7.12e-08;41!UBERON:0001890;7.12e-08;41!UBERON:0000073;9.49e-08;53!UBERON:0002616;9.49e-08;53!UBERON:0002619;8.40e-07;22 | |||
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298015 | ||
|short_description=p1@SRI | |short_description=p1@SRI | ||
}} | }} |
Latest revision as of 21:54, 19 September 2015
Short description: | p1@SRI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRI_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265729, ENST00000419179, ENST00000457606, ENST00000486860, ENST00000488015, NM_003130, uc003ujq.1, uc010lej.1, uc011khg.1_5end |
EntrezGene: | SRI |
HGNC: | 11292 |
UniProt: | P30626B4DHQ6E9PG82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.55e-14 | 121 |
embryonic cell | 2.56e-11 | 250 |
endothelial cell of vascular tree | 2.31e-09 | 24 |
blood vessel endothelial cell | 5.40e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.40e-09 | 18 |
lining cell | 6.34e-08 | 58 |
barrier cell | 6.34e-08 | 58 |
meso-epithelial cell | 2.26e-07 | 45 |
endothelial cell | 2.90e-07 | 36 |
electrically responsive cell | 7.34e-07 | 61 |
electrically active cell | 7.34e-07 | 61 |