FFCP PHASE1:Hg19::chr3:98312434..98312474,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2321 | |||
|TSSclassifier=strong | |||
|UniProt=P36551 | |||
|association_with_transcript=0bp_to_ENST00000515041,NM_000097,uc003dsx.2,uc011bgz.1_5end | |||
|cluster_id=chr3:98312434..98312474,- | |||
|coexpression_cluster_id=C4351 | |||
|description=CAGE_peak_1_at_CPOX_5end | |||
|id=chr3:98312434..98312474,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.24e-14!57;UBERON:0005068!2.24e-14!57;UBERON:0006241!2.24e-14!57;UBERON:0007135!2.24e-14!57;UBERON:0002616!6.56e-13!59;UBERON:0000025!7.52e-13!194;UBERON:0002020!2.90e-12!34;UBERON:0003528!2.90e-12!34;UBERON:0001893!3.15e-12!34;UBERON:0000955!5.40e-12!69;UBERON:0006238!5.40e-12!69;UBERON:0002791!1.00e-11!33;UBERON:0001017!1.12e-11!82;UBERON:0002780!4.53e-11!41;UBERON:0001890!4.53e-11!41;UBERON:0006240!4.53e-11!41;UBERON:0001869!4.82e-11!32;UBERON:0004111!5.81e-11!241;UBERON:0003080!7.09e-11!42;UBERON:0005743!8.76e-11!86;UBERON:0000477!9.43e-11!286;UBERON:0000119!2.89e-10!312;UBERON:0000483!7.09e-10!309;UBERON:0000073!5.78e-09!94;UBERON:0001016!5.78e-09!94;UBERON:0003075!6.12e-09!86;UBERON:0007284!6.12e-09!86;UBERON:0002619!3.21e-08!22;UBERON:0002346!3.76e-08!90;UBERON:0000153!6.36e-08!129;UBERON:0007811!6.36e-08!129;UBERON:0000956!7.05e-08!25;UBERON:0000203!7.05e-08!25;UBERON:0000033!1.00e-07!123;UBERON:0001950!2.37e-07!20;UBERON:0003056!2.62e-07!61;UBERON:0000475!3.95e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.14e-11;34!UBERON:0003528;2.28e-10;34!UBERON:0002020;2.28e-10;34!UBERON:0002791;4.15e-10;32!UBERON:0001869;5.30e-10;32!UBERON:0002780;3.00e-08;41!UBERON:0001890;3.00e-08;41!UBERON:0002619;3.41e-08;22!UBERON:0000073;6.62e-08;53!UBERON:0002616;6.62e-08;53!UBERON:0000956;7.99e-08;25!UBERON:0000203;7.99e-08;25!UBERON:0001950;2.46e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.44e-14,56;UBERON:0005068,1.44e-14,56;UBERON:0006241,1.44e-14,56;UBERON:0007135,1.44e-14,56;UBERON:0000073,1.31e-13,53;UBERON:0002616,1.31e-13,53;UBERON:0000025,7.49e-13,192;UBERON:0003528,2.90e-12,34;UBERON:0002020,2.90e-12,34;UBERON:0001893,3.15e-12,34;UBERON:0000955,4.07e-12,68;UBERON:0006238,4.07e-12,68;UBERON:0001017,8.95e-12,81;UBERON:0002791,3.85e-11,32;UBERON:0002780,4.53e-11,41;UBERON:0001890,4.53e-11,41;UBERON:0003080,4.53e-11,41;UBERON:0006240,4.53e-11,41;UBERON:0001869,4.82e-11,32;UBERON:0000119,4.89e-11,309;UBERON:0004111,1.01e-10,240;UBERON:0000483,1.24e-10,306;UBERON:0003075,4.73e-10,82;UBERON:0007284,4.73e-10,82;UBERON:0001016,9.60e-10,89;UBERON:0010314,2.20e-09,132;UBERON:0002346,3.71e-09,86;UBERON:0002619,3.21e-08,22;UBERON:0010371,6.34e-08,104;UBERON:0000956,7.05e-08,25;UBERON:0000203,7.05e-08,25;UBERON:0003056,8.09e-08,61;UBERON:0011216,1.92e-07,223;UBERON:0001950,2.37e-07,20 | |||
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| |||
|short_description=p1@CPOX | |||
}} |
Latest revision as of 22:11, 19 September 2015
Short description: | p1@CPOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPOX_5end |
Coexpression cluster: | C4351_Reticulocytes_splenic_plasma_chronic_liver_optic_b |
Association with transcript: | 0bp_to_ENST00000515041, NM_000097, uc003dsx.2, uc011bgz.1_5end |
EntrezGene: | CPOX |
HGNC: | 2321 |
UniProt: | P36551 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.44e-14 | 56 |
neural rod | 1.44e-14 | 56 |
future spinal cord | 1.44e-14 | 56 |
neural keel | 1.44e-14 | 56 |
regional part of nervous system | 1.31e-13 | 53 |
regional part of brain | 1.31e-13 | 53 |
tube | 7.49e-13 | 192 |
brain grey matter | 2.90e-12 | 34 |
gray matter | 2.90e-12 | 34 |
telencephalon | 3.15e-12 | 34 |
brain | 4.07e-12 | 68 |
future brain | 4.07e-12 | 68 |
central nervous system | 8.95e-12 | 81 |
regional part of telencephalon | 3.85e-11 | 32 |
regional part of forebrain | 4.53e-11 | 41 |
forebrain | 4.53e-11 | 41 |
anterior neural tube | 4.53e-11 | 41 |
future forebrain | 4.53e-11 | 41 |
cerebral hemisphere | 4.82e-11 | 32 |
cell layer | 4.89e-11 | 309 |
anatomical conduit | 1.01e-10 | 240 |
epithelium | 1.24e-10 | 306 |
neural plate | 4.73e-10 | 82 |
presumptive neural plate | 4.73e-10 | 82 |
nervous system | 9.60e-10 | 89 |
structure with developmental contribution from neural crest | 2.20e-09 | 132 |
neurectoderm | 3.71e-09 | 86 |
regional part of cerebral cortex | 3.21e-08 | 22 |
ecto-epithelium | 6.34e-08 | 104 |
cerebral cortex | 7.05e-08 | 25 |
pallium | 7.05e-08 | 25 |
pre-chordal neural plate | 8.09e-08 | 61 |
organ system subdivision | 1.92e-07 | 223 |
neocortex | 2.37e-07 | 20 |