FFCP PHASE1:Hg19::chr2:211342345..211342356,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1373 | |EntrezGene=1373 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2323 | |HGNC=2323 | ||
|TSSclassifier=strong | |||
|UniProt=C9JTA4,P31327,Q59HF8,Q6PEK7 | |UniProt=C9JTA4,P31327,Q59HF8,Q6PEK7 | ||
|association_with_transcript=-49bp_to_ENST00000417946,ENST00000518043,NM_001122633_5end | |association_with_transcript=-49bp_to_ENST00000417946,ENST00000518043,NM_001122633_5end | ||
|cluster_id=chr2:211342345..211342356,+ | |||
|description=CAGE_peak_5_at_CPS1_5end | |description=CAGE_peak_5_at_CPS1_5end | ||
|id=chr2:211342345..211342356,+ | |id=chr2:211342345..211342356,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.46e-10!180 | |ontology_enrichment_celltype=CL:0000055!2.46e-10!180 | ||
|ontology_enrichment_celltype_v019=CL:0002549;4.00e-07;2!CL:0002561;4.00e-07;2!CL:1000306;7.85e-07;4!CL:0002547;7.85e-07;4 | |ontology_enrichment_celltype_v019=CL:0002549;4.00e-07;2!CL:0002561;4.00e-07;2!CL:1000306;7.85e-07;4!CL:0002547;7.85e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002561,3.93e-07,2;CL:0002549,4.17e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.46e-07!365;UBERON:0002199!5.97e-07!45;UBERON:0002416!5.97e-07!45 | |ontology_enrichment_uberon=UBERON:0000475!3.46e-07!365;UBERON:0002199!5.97e-07!45;UBERON:0002416!5.97e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;4.35e-08;15!UBERON:0007376;4.35e-08;15!UBERON:0005629;4.00e-07;2!UBERON:0005358;4.00e-07;2!UBERON:0005933;4.00e-07;2!UBERON:0001886;4.00e-07;2!UBERON:0005942;4.00e-07;2!UBERON:0004086;4.00e-07;2!UBERON:0005282;4.00e-07;2!UBERON:0005281;4.00e-07;2!UBERON:0005932;4.00e-07;2!UBERON:0004797;7.85e-07;4!UBERON:0000415;7.85e-07;4!UBERON:0007240;7.85e-07;4!UBERON:0005742;7.85e-07;4!UBERON:0005734;7.85e-07;4!UBERON:0004664;7.85e-07;4!UBERON:0004663;7.85e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001003;4.35e-08;15!UBERON:0007376;4.35e-08;15!UBERON:0005629;4.00e-07;2!UBERON:0005358;4.00e-07;2!UBERON:0005933;4.00e-07;2!UBERON:0001886;4.00e-07;2!UBERON:0005942;4.00e-07;2!UBERON:0004086;4.00e-07;2!UBERON:0005282;4.00e-07;2!UBERON:0005281;4.00e-07;2!UBERON:0005932;4.00e-07;2!UBERON:0004797;7.85e-07;4!UBERON:0000415;7.85e-07;4!UBERON:0007240;7.85e-07;4!UBERON:0005742;7.85e-07;4!UBERON:0005734;7.85e-07;4!UBERON:0004664;7.85e-07;4!UBERON:0004663;7.85e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.72e-08,41;UBERON:0001003,2.52e-08,15;UBERON:0007376,2.52e-08,15;UBERON:0007383,2.52e-08,15;UBERON:0002199,2.94e-07,46;UBERON:0002416,2.94e-07,46;UBERON:0005933,3.93e-07,2;UBERON:0005942,3.93e-07,2;UBERON:0005932,3.93e-07,2;UBERON:0005629,4.17e-07,2;UBERON:0005358,4.17e-07,2;UBERON:0001886,4.17e-07,2;UBERON:0004086,4.17e-07,2;UBERON:0005282,4.17e-07,2;UBERON:0005281,4.17e-07,2 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0.436882744260345,0,1.48519623552056,0.662794751455832,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0.30120591877825,0.739508020333575,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.511450247374121,1.0843174571537,2.00535164254356,0.434539556882471,0.795285947051099,0,0.189069634328136,0,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,1.45650098894541,2.0078563452417,1.06400514659507,0,0,0,0.933633106199299,0,0.653847612453835,2.11900398702904,2.30470369792,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0.469737994575059,0,0,2.04154171254893,0.61417158655884,1.65321249881225,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.375355559615893,0.554128230968366,0,0.30648779579902,0.300476117813194,0,0.89694817844431,0,1.27159140695737,0.600182192168805,0.515262646192195,1.28820270022815,0.744467425326359,2.02531598689519,0.779496041289589,1.26216887122057,0.736399189138395,1.45481451136931,0.710019185033229,0.403008392910561,0,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0.232387885739037,0.725627385107593,0,1.45990943630332,0,0,1.38134921352481,2.3218396401599,2.16563844500876,0.828147600278907,0.168584690078102,0.241011029883482,1.10293972732394,0.653638332277218,0,0.404493924480493,0.392442930250692,1.92373578473195,0,0,0,0,0,0,0,0,0,0.171567810298526,1.09750285408626,0,0.201057944823262,0.833296006426766,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.53735113621709,1.74380363108377,0,0,0,0,0,0,0.507983154337352,0,0,0,0.102827492703324,0,0.571652865261156,1.00917975910825,1.30788020649984,0.8800594298514,0.517086863031111,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,1.00084595560703,0.542621605391443,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.479249710983165,1.14861935834114,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,1.50051156317903,0.271265023699736,0.415941723061614,0.356857977594324,0.630809660135739,1.28855556491985,1.20378439891088,0,0,0.664225598535437,0,0.434418072340414,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0.511707249066704,0,0,0.308419387605311,0.355123450626254,0.492762936082855,0,0.348631135379878,0,0.601519410909855,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,1.95018073810956,1.6068392984416,0.580024309752732,0.308097234229289,0.15350367472613,0.137836572484531,1.6113036730241,1.0151168573996,0.255679882248303,0.445160178233687,0,0,0.638063562472921,0.10115778085555,1.39453664789186,1.25924938732256,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.572499546967965,0.744316738719335,0.632758849437452,0.190630193923825,0,0.42793898803392,0.636406495851874,0,0.179872457583315,0,0.471249609382746,0.808729926293264,0,0,0,0,1.05650146756755,0.409499734223957,0.282810863907425,2.26016233240486,0,0,0,0,1.31178950409327,0.405820753925408,0,0,0.143411352204052,0.392996164052485,0,0,0,0.329294892959902,0,0.349934720244983,0.288666338176536,0,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0.144269212976445,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0.313359791546046,2.50634477090067,0.677167111206413,0,0,0,0,0,0,0,0.586164286206121,0,0,0.811367035427949,1.6653598399891,0,0.748562161632879,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0.667852230137435,0,0,0.19924798825107,0,0,0.409074730008619,0,0.622079175323615,0,0,0,0,0,0,0,0.278304294485554,0,0,0.787139999965761,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0.361789315876224,1.52581736317083,0.221158519862449,0,0.438770794307945,0.435753854075961,0,0.307801034015188,0,0,1.79515288819544,0,0,0,0,0,0.784901281975124,0,0,0.392125068635479,0.167821586975843,0.189753732724185,0.635746315921515,0,0.652931232636591,0,0.865554558968364,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0.252746318513952,0,0.518440956986236,0.664653872707185,0.992975867626496,0.627865836814451,1.19472429772959,0.284609546029793,0.693373365065693,0,0.0979923974143777,0,0.34945333648406,1.20390222730132,0.677294319023596,0.292357268344742,0.574808199372465,0,0.0882561266915003,0,0.548167698587004,0.19871461170299,0.126621591911757,0,0.480952921509202,0.85381197895741,0,0,0.114536596165916,0,0,2.11229310461235,0,2.98989253361951,2.30126261887133,0.9179839587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| ||
|short_description=p5@CPS1 | |short_description=p5@CPS1 | ||
}} | }} |
Latest revision as of 22:16, 19 September 2015
Short description: | p5@CPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000417946, ENST00000518043, NM_001122633_5end |
EntrezGene: | CPS1 |
HGNC: | 2323 |
UniProt: | C9JTA4P31327Q59HF8Q6PEK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 3.93e-07 | 2 |
fibroblast of choroid plexus | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.72e-08 | 41 |
skin epidermis | 2.52e-08 | 15 |
outer epithelium | 2.52e-08 | 15 |
enveloping layer of ectoderm | 2.52e-08 | 15 |
integument | 2.94e-07 | 46 |
integumental system | 2.94e-07 | 46 |
hair root sheath | 3.93e-07 | 2 |
hair outer root sheath | 3.93e-07 | 2 |
bulb of hair follicle | 3.93e-07 | 2 |
vascular plexus | 4.17e-07 | 2 |
ventricle of nervous system | 4.17e-07 | 2 |
choroid plexus | 4.17e-07 | 2 |
brain ventricle | 4.17e-07 | 2 |
ventricular system of brain | 4.17e-07 | 2 |
ventricular system of central nervous system | 4.17e-07 | 2 |