FFCP PHASE1:Hg19::chr2:211342364..211342384,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1373 | |EntrezGene=1373 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2323 | |HGNC=2323 | ||
|TSSclassifier=strong | |||
|UniProt=C9JTA4,P31327,Q59HF8,Q6PEK7 | |UniProt=C9JTA4,P31327,Q59HF8,Q6PEK7 | ||
|association_with_transcript=-21bp_to_ENST00000417946,ENST00000518043,NM_001122633_5end | |association_with_transcript=-21bp_to_ENST00000417946,ENST00000518043,NM_001122633_5end | ||
|cluster_id=chr2:211342364..211342384,+ | |||
|description=CAGE_peak_4_at_CPS1_5end | |description=CAGE_peak_4_at_CPS1_5end | ||
|id=chr2:211342364..211342384,+ | |id=chr2:211342364..211342384,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.75e-13!180;CL:0000057!5.31e-10!75;CL:0002620!1.79e-09!23 | |ontology_enrichment_celltype=CL:0000055!2.75e-13!180;CL:0000057!5.31e-10!75;CL:0002620!1.79e-09!23 | ||
|ontology_enrichment_celltype_v019=CL:0002556;1.01e-07;6!CL:1000306;3.21e-07;4!CL:0002547;3.21e-07;4 | |ontology_enrichment_celltype_v019=CL:0002556;1.01e-07;6!CL:1000306;3.21e-07;4!CL:0002547;3.21e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.30e-10,76;CL:0002556,8.11e-08,6;CL:1000306,2.65e-07,4;CL:0002547,2.65e-07,4;CL:0002620,9.73e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;3.86e-08;11!DOID:1909;5.02e-07;2 | |ontology_enrichment_disease_v019=DOID:3093;3.86e-08;11!DOID:1909;5.02e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,1.40e-08,11;DOID:1909,2.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.07e-10!365;UBERON:0000033!9.98e-08!123;UBERON:0004121!2.04e-07!169;UBERON:0000924!2.84e-07!173;UBERON:0006601!2.84e-07!173;UBERON:0002097!3.73e-07!40;UBERON:0000153!5.69e-07!129;UBERON:0007811!5.69e-07!129 | |ontology_enrichment_uberon=UBERON:0000475!5.07e-10!365;UBERON:0000033!9.98e-08!123;UBERON:0004121!2.04e-07!169;UBERON:0000924!2.84e-07!173;UBERON:0006601!2.84e-07!173;UBERON:0002097!3.73e-07!40;UBERON:0000153!5.69e-07!129;UBERON:0007811!5.69e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.01e-07;6!UBERON:0003672;1.01e-07;6!UBERON:0004797;3.21e-07;4!UBERON:0000415;3.21e-07;4!UBERON:0007240;3.21e-07;4!UBERON:0005742;3.21e-07;4!UBERON:0005734;3.21e-07;4!UBERON:0004664;3.21e-07;4!UBERON:0004663;3.21e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001758;1.01e-07;6!UBERON:0003672;1.01e-07;6!UBERON:0004797;3.21e-07;4!UBERON:0000415;3.21e-07;4!UBERON:0007240;3.21e-07;4!UBERON:0005742;3.21e-07;4!UBERON:0005734;3.21e-07;4!UBERON:0004664;3.21e-07;4!UBERON:0004663;3.21e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,8.11e-08,6;UBERON:0003672,8.11e-08,6;UBERON:0000415,2.65e-07,4;UBERON:0007240,2.65e-07,4;UBERON:0005742,2.65e-07,4;UBERON:0005734,2.65e-07,4;UBERON:0004664,2.65e-07,4;UBERON:0004663,2.65e-07,4;UBERON:0004797,7.09e-07,7 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0.218441372130172,0.527533956456907,0.866364470720326,0.994192127183747,0.672325146451775,0.602694528023977,0,0.487932798790507,0.369363174230364,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.382067028739756,0.328402357799783,0.236132343941038,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.361439152384566,0,0.724232594804119,0.795285947051099,0,0.567208902984407,0.221729397462564,0.263504357079378,0.523916301990851,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,1.13967460498122,1.45650098894541,2.86836620748814,0.709336764396714,0,0,0,0.311211035399766,0,0.163461903113459,2.11900398702904,0.576175924479999,0.70296429550139,0,1.71141546463335,0.448346041655403,0.939475989150119,0.161872944368132,0.561803226808994,1.22492502752936,0.859840221182376,1.13658359293342,0,0.741800787835671,0,0,1.0100166837244,1.12606667884768,0.831192346452549,1.75591048352335,1.83892677479412,0,0.113432183160021,1.4351170855109,0.640672166455702,0.635795703478686,0.600182192168805,0.721367704669072,0.515281080091258,0.744467425326359,3.71307930930786,1.46155507741798,1.00973509697646,0.736399189138395,1.61646056818812,1.06502877754984,0.806016785821122,0.847802961552438,1.15956511897978,0,0,0.609868530647977,0.397589304964456,0.348581828608555,0.725627385107593,0,2.55484151353081,0,0,0,0.464367928031979,0.721879481669586,0.591534000199219,0.337169380156203,0.723033089650446,0.330881918197182,0.435758888184812,0,0.539325232640658,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,0.100528972411631,0.833296006426766,0,1.03993478527958,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,1.07470227243418,0.871901815541886,0,0,0,0,0,0,0.698476837213859,0.381988425558278,2.34434894420094,0,0.308482478109971,0,0,0.560655421726804,0.87192013766656,0.4400297149257,0.258543431515556,0,0,0,0,0.257207374262142,0,0,1.71573592389777,0,0.823240336780769,0.325736184293735,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0.500170521059677,0.542530047399471,0,0.535286966391485,0,0.937131319941706,0.300946099727719,0,0,0.664225598535437,0,0.173767228936166,0.391602314925481,0,0,0,0,0,0,0.907170879989041,0,0.767309866440312,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.410635780069046,0.519254429183621,0.464841513839837,0,1.00253235151642,0.0920809889358963,0.114814448164607,0,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.103041011647722,0,0,0.574265537996172,0,0,0.48335359146061,0.770243085573222,0.614014698904518,0.275673144969061,1.50388342815583,0.580066775656914,0.170453254832202,0.623224249527161,0.165284915360978,0,0.765676274967505,0,0.464845549297286,1.88887408098384,0.6970372701606,0,0,0,0,0.429374660225974,1.116475108079,0.632758849437452,0,0,0,0.636406495851874,0,0.179872457583315,0.54907405947211,0.353437207037059,0.202182481573316,0,0.842516912477962,0,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.430234056612155,0.0982490410131212,0,0,0.211107635297664,0.658589785919804,0,0,0.769776901804097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0.432807638929335,0.0711418433484141,0,0,0,0,0,0,0.456469358066384,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0,0,0.278406173895242,2.46174797895425,0.540911356951966,0.99921590399346,0,1.49712432326576,0.293016358543788,0,0.222886768554957,0,0,0,0,0.994147647766298,0.562677665642051,0.890469640183247,0,0,0,0,0,0.920418142519393,0,0,0,0,0,0,0,1.11136990144637,0,0.556608588971108,0,0,1.39935999993913,0,0,0,0.236387681767936,0,0,0.520874984799877,0,0.241192877250816,0,0.442317039724898,0,0.658156191461918,0.32681539055697,0,0.153900517007594,0.113942055847001,0,2.15418346583453,0,0,0.183195186803725,0,0,0.941881538370149,0.166211681900156,0.225595660617181,0.588187602953219,0.335643173951685,0.75901493089674,0.953619473882272,0,0.816164040795739,0,2.59666367690509,0.995261931078505,0,0,0,0,0,0.808813595768125,0,0.234264445725339,0,0,0.242780379534093,0.394584402849391,0,0,0.252746318513952,0.150323419414493,0.622129148383483,0.664653872707185,0.992975867626496,0.313932918407225,0,0.853828638089378,0.138674673013139,0.173559738335131,0.293977192243133,0.0870592065804026,0.17472666824203,1.71986032471617,1.064319644179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| ||
|short_description=p4@CPS1 | |short_description=p4@CPS1 | ||
}} | }} |
Latest revision as of 22:16, 19 September 2015
Short description: | p4@CPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000417946, ENST00000518043, NM_001122633_5end |
EntrezGene: | CPS1 |
HGNC: | 2323 |
UniProt: | C9JTA4P31327Q59HF8Q6PEK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.30e-10 | 76 |
fibroblast of periodontium | 8.11e-08 | 6 |
fibroblast of tunica adventitia of artery | 2.65e-07 | 4 |
fibroblast of the aortic adventitia | 2.65e-07 | 4 |
skin fibroblast | 9.73e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
periodontium | 8.11e-08 | 6 |
dentition | 8.11e-08 | 6 |
artery wall | 2.65e-07 | 4 |
tunica adventitia of artery | 2.65e-07 | 4 |
adventitia | 2.65e-07 | 4 |
tunica adventitia of blood vessel | 2.65e-07 | 4 |
aorta tunica adventitia | 2.65e-07 | 4 |
aorta wall | 2.65e-07 | 4 |
blood vessel layer | 7.09e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.40e-08 | 11 |
melanoma | 2.96e-07 | 2 |