FFCP PHASE1:Hg19::chr9:1050449..1050468,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10655 | |EntrezGene=10655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2935 | |HGNC=2935 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5R5 | |UniProt=Q9Y5R5 | ||
|association_with_transcript=94bp_to_ENST00000412350,uc003zgy.3,uc003zhb.3_5end | |association_with_transcript=94bp_to_ENST00000412350,uc003zgy.3,uc003zhb.3_5end | ||
|cluster_id=chr9:1050449..1050468,+ | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_2_at_DMRT2_5end | |description=CAGE_peak_2_at_DMRT2_5end | ||
|id=chr9:1050449..1050468,+ | |id=chr9:1050449..1050468,+ | ||
|ontology_enrichment_celltype=CL:0002583!1.08e-07!2;CL:0002076!5.01e-07!43 | |ontology_enrichment_celltype=CL:0002583!1.08e-07!2;CL:0002076!5.01e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.23e-15;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.29e-15,24;CL:0000826,3.29e-15,24;CL:0000838,3.23e-07,52;CL:0000542,4.36e-07,53;CL:0000051,4.36e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.41e-20;10!UBERON:0000178;8.20e-14;15!UBERON:0000179;8.20e-14;15!UBERON:0000463;8.20e-14;15!UBERON:0000478;7.03e-09;24!UBERON:0002390;7.05e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.04e-20,10;UBERON:0000358,2.04e-20,10;UBERON:0000307,2.04e-20,10;UBERON:0000091,2.04e-20,10;UBERON:0000087,2.04e-20,10;UBERON:0007010,2.04e-20,10;UBERON:0007806,2.04e-20,10;UBERON:0008780,2.04e-20,10;UBERON:0005728,2.04e-20,10;UBERON:0000178,7.35e-14,15;UBERON:0000179,7.35e-14,15;UBERON:0000463,7.35e-14,15;UBERON:0000478,6.57e-09,24 | |||
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| ||
|short_description=p2@DMRT2 | |short_description=p2@DMRT2 | ||
}} | }} |
Latest revision as of 22:21, 19 September 2015
Short description: | p2@DMRT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DMRT2_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 94bp_to_ENST00000412350, uc003zgy.3, uc003zhb.3_5end |
EntrezGene: | DMRT2 |
HGNC: | 2935 |
UniProt: | Q9Y5R5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.29e-15 | 24 |
pro-B cell | 3.29e-15 | 24 |
lymphoid lineage restricted progenitor cell | 3.23e-07 | 52 |
lymphocyte | 4.36e-07 | 53 |
common lymphoid progenitor | 4.36e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.04e-20 | 10 |
blastocyst | 2.04e-20 | 10 |
blastula | 2.04e-20 | 10 |
bilaminar disc | 2.04e-20 | 10 |
inner cell mass | 2.04e-20 | 10 |
cleaving embryo | 2.04e-20 | 10 |
connecting stalk | 2.04e-20 | 10 |
inner cell mass derived epiblast | 2.04e-20 | 10 |
extraembryonic mesoderm | 2.04e-20 | 10 |
blood | 7.35e-14 | 15 |
haemolymphatic fluid | 7.35e-14 | 15 |
organism substance | 7.35e-14 | 15 |
extraembryonic structure | 6.57e-09 | 24 |