FFCP PHASE1:Hg19::chr19:54984688..54984701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148170 | |EntrezGene=148170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17408 | |HGNC=17408 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NZY7 | |UniProt=Q6NZY7 | ||
|association_with_transcript=-266bp_to_NM_145057,uc002qfz.1_5end | |association_with_transcript=-266bp_to_NM_145057,uc002qfz.1_5end | ||
|cluster_id=chr19:54984688..54984701,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_CDC42EP5_5end | |description=CAGE_peak_6_at_CDC42EP5_5end | ||
|id=chr19:54984688..54984701,- | |id=chr19:54984688..54984701,- | ||
|ontology_enrichment_celltype=CL:0000068!1.06e-08!3;CL:0000069!1.06e-08!3;CL:0000307!1.06e-08!3;CL:0000377!1.06e-08!3 | |ontology_enrichment_celltype=CL:0000068!1.06e-08!3;CL:0000069!1.06e-08!3;CL:0000307!1.06e-08!3;CL:0000377!1.06e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.83e-14;3!CL:0000307;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.60e-14,3;CL:0000068,2.09e-14,3;CL:0000069,2.09e-14,3;CL:0000307,2.09e-14,3;CL:0000377,2.09e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10!CL:0000377;1.83e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002146!3.60e-07!1;UBERON:0005623!3.60e-07!1;UBERON:0001301!4.57e-07!1;UBERON:0006834!6.12e-07!1 | |ontology_enrichment_uberon=UBERON:0002146!3.60e-07!1;UBERON:0005623!3.60e-07!1;UBERON:0001301!4.57e-07!1;UBERON:0006834!6.12e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0001987;3.42e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003133,2.89e-08,48;UBERON:0003124,5.70e-07,7;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7;UBERON:0005156,7.38e-07,59;UBERON:0000990,7.38e-07,59 | |||
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|short_description=p6@CDC42EP5 | |short_description=p6@CDC42EP5 | ||
}} | }} |
Latest revision as of 22:49, 19 September 2015
Short description: | p6@CDC42EP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CDC42EP5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -266bp_to_NM_145057, uc002qfz.1_5end |
EntrezGene: | CDC42EP5 |
HGNC: | 17408 |
UniProt: | Q6NZY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.60e-14 | 3 |
duct epithelial cell | 2.09e-14 | 3 |
branched duct epithelial cell | 2.09e-14 | 3 |
tracheal epithelial cell | 2.09e-14 | 3 |
tracheoblast | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
placenta | 3.10e-11 | 4 |
allantois | 3.10e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
reproductive organ | 2.89e-08 | 48 |
chorion | 5.70e-07 | 7 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |
reproductive structure | 7.38e-07 | 59 |
reproductive system | 7.38e-07 | 59 |