FFCP PHASE1:Hg19::chr17:38119216..38119230,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284110 | |EntrezGene=284110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13311 | |HGNC=13311 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QA5 | |UniProt=Q96QA5 | ||
|association_with_transcript=0bp_to_ENST00000301659,NM_178171,uc002htl.1_5end | |association_with_transcript=0bp_to_ENST00000301659,NM_178171,uc002htl.1_5end | ||
|cluster_id=chr17:38119216..38119230,+ | |||
|description=CAGE_peak_2_at_GSDMA_5end | |description=CAGE_peak_2_at_GSDMA_5end | ||
|id=chr17:38119216..38119230,+ | |id=chr17:38119216..38119230,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.99e-15!18;CL:0000789!1.99e-15!18;CL:0002420!1.99e-15!18;CL:0002419!1.99e-15!18;CL:0000790!1.99e-15!18;CL:0000084!3.68e-12!25;CL:0000827!3.68e-12!25;CL:0000838!1.70e-10!52;CL:0000542!3.31e-10!53;CL:0000051!3.31e-10!53;CL:0000624!3.01e-09!6;CL:0002159!2.62e-08!13;CL:0000623!5.45e-08!3;CL:0000825!5.45e-08!3;CL:0000622!8.14e-08!5;CL:0000362!1.02e-07!8;CL:0002621!3.06e-07!3;CL:0000625!5.35e-07!11 | |ontology_enrichment_celltype=CL:0000791!1.99e-15!18;CL:0000789!1.99e-15!18;CL:0002420!1.99e-15!18;CL:0002419!1.99e-15!18;CL:0000790!1.99e-15!18;CL:0000084!3.68e-12!25;CL:0000827!3.68e-12!25;CL:0000838!1.70e-10!52;CL:0000542!3.31e-10!53;CL:0000051!3.31e-10!53;CL:0000624!3.01e-09!6;CL:0002159!2.62e-08!13;CL:0000623!5.45e-08!3;CL:0000825!5.45e-08!3;CL:0000622!8.14e-08!5;CL:0000362!1.02e-07!8;CL:0002621!3.06e-07!3;CL:0000625!5.35e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000317;2.15e-17;2!CL:1000448;2.15e-17;2!CL:0002308;2.15e-17;2!CL:0002140;2.15e-17;2!CL:0000362;1.25e-14;9!CL:0002159;3.26e-14;14!CL:0000623;1.68e-11;3!CL:0000244;4.07e-09;4!CL:0000731;4.07e-09;4!CL:0000622;1.74e-07;5!CL:0000312;2.47e-07;5!CL:0000625;5.74e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.49e-17,2;CL:1000448,1.49e-17,2;CL:0002308,1.49e-17,2;CL:0002140,1.49e-17,2;CL:0000362,1.16e-14,9;CL:0002159,2.88e-14,14;CL:0000623,1.51e-11,3;CL:0000825,1.51e-11,3;CL:0000244,4.51e-09,4;CL:0000731,4.51e-09,4;CL:0000622,1.50e-07,5;CL:0000312,2.68e-07,5;CL:0000625,5.23e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.08e-09;1!DOID:3149;2.08e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.16e-09,1;DOID:3149,2.16e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0006562!2.28e-08!11;UBERON:0000166!2.50e-08!21;UBERON:0001723!2.02e-07!3;UBERON:0001033!2.02e-07!3;UBERON:0010056!2.02e-07!3;UBERON:0001949!3.06e-07!3;UBERON:0001042!4.74e-07!10;UBERON:0009145!4.74e-07!10;UBERON:0000165!6.03e-07!28;UBERON:0000930!6.03e-07!28 | |ontology_enrichment_uberon=UBERON:0006562!2.28e-08!11;UBERON:0000166!2.50e-08!21;UBERON:0001723!2.02e-07!3;UBERON:0001033!2.02e-07!3;UBERON:0010056!2.02e-07!3;UBERON:0001949!3.06e-07!3;UBERON:0001042!4.74e-07!10;UBERON:0009145!4.74e-07!10;UBERON:0000165!6.03e-07!28;UBERON:0000930!6.03e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.15e-17;2!UBERON:0007771;2.15e-17;2!UBERON:0003297;2.15e-17;2!UBERON:0001821;2.15e-17;2!UBERON:0003487;2.15e-17;2!UBERON:0001820;2.15e-17;2!UBERON:0001003;2.33e-13;15!UBERON:0007376;2.33e-13;15!UBERON:0001723;1.68e-11;3!UBERON:0001033;1.68e-11;3!UBERON:0007029;2.08e-09;1!UBERON:0001301;2.08e-09;1!UBERON:0000014;5.29e-09;4!UBERON:0000365;1.85e-07;5!UBERON:0003102;7.07e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.49e-17,2;UBERON:0007771,1.49e-17,2;UBERON:0003297,1.49e-17,2;UBERON:0001821,1.49e-17,2;UBERON:0003487,1.49e-17,2;UBERON:0001820,1.49e-17,2;UBERON:0005089,1.49e-17,2;UBERON:0005088,1.49e-17,2;UBERON:0001003,2.19e-13,15;UBERON:0007376,2.19e-13,15;UBERON:0007383,2.19e-13,15;UBERON:0001723,2.44e-11,3;UBERON:0001033,2.44e-11,3;UBERON:0010056,2.44e-11,3;UBERON:0001301,1.69e-09,1;UBERON:0007029,1.99e-09,1;UBERON:0000014,5.30e-09,4;UBERON:0000365,2.01e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0.767658796194425,0,0,0.30120591877825,0,0.852139206383318,0,0,0,0.401088894940283,0.434021741431704,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0.411202997999018,8.3593247695339,0.651844533267181,0.946895611469467,0,2.45103005147382,0.883817722424512,0.664601683750863,0,1.28091319725675,2.21100890851793,0.493313713811028,0,0.579606171470105,0.14828656316206,0,0,0.679856056185397,0,0.34362744548263,0,0.637130828648193,0,0,0.301150238155546,0.255973222308837,0,0,0,1.20964045934839,2.67440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,3.37205259772859,1.00528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806026704325635,3.19697332365358,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,1.94064817373566,2.31017465303547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.460404944679482,0,0,0,0.451199612907412,0.385076685522074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87132768998086,5.85054221432869,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36942951335251,2.21715076768338,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,2.34804281319486,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,12.6808788596006,0,0,19.753326447184,0,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0,0,0,0,2.17716747896961,1.02669990325584,0.336760265072938,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0.767658796194425,0,0,0.30120591877825,0,0.852139206383318,0,0,0,0.401088894940283,0.434021741431704,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0.411202997999018,8.3593247695339,0.651844533267181,0.946895611469467,0,2.45103005147382,0.883817722424512,0.664601683750863,0,1.28091319725675,2.21100890851793,0.493313713811028,0,0.579606171470105,0.14828656316206,0,0,0.679856056185397,0,0.34362744548263,0,0.637130828648193,0,0,0.301150238155546,0.255973222308837,0,0,0,1.20964045934839,2.67440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,3.37205259772859,1.00528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806026704325635,3.19697332365358,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,1.94064817373566,2.31017465303547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.460404944679482,0,0,0,0.451199612907412,0.385076685522074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87132768998086,5.85054221432869,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36942951335251,2.21715076768338,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,2.34804281319486,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,12.6808788596006,0,0,19.753326447184,0,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0,0,0,0,2.17716747896961,1.02669990325584,0.336760265072938,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p2@GSDMA | |short_description=p2@GSDMA | ||
}} | }} |
Latest revision as of 23:24, 19 September 2015
Short description: | p2@GSDMA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GSDMA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000301659, NM_178171, uc002htl.1_5end |
EntrezGene: | GSDMA |
HGNC: | 13311 |
UniProt: | Q96QA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.49e-17 | 2 |
epithelial cell of sweat gland | 1.49e-17 | 2 |
epithelial cell of skin gland | 1.49e-17 | 2 |
acinar cell of sebaceous gland | 1.49e-17 | 2 |
epidermal cell | 1.16e-14 | 9 |
general ecto-epithelial cell | 2.88e-14 | 14 |
natural killer cell | 1.51e-11 | 3 |
pro-NK cell | 1.51e-11 | 3 |
transitional epithelial cell | 4.51e-09 | 4 |
urothelial cell | 4.51e-09 | 4 |
acinar cell | 1.50e-07 | 5 |
keratinocyte | 2.68e-07 | 5 |
CD8-positive, alpha-beta T cell | 5.23e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.49e-17 | 2 |
epidermis gland | 1.49e-17 | 2 |
gland of integumental system | 1.49e-17 | 2 |
sebaceous gland | 1.49e-17 | 2 |
skin sebaceous gland | 1.49e-17 | 2 |
sweat gland | 1.49e-17 | 2 |
sweat gland placode | 1.49e-17 | 2 |
sebaceous gland placode | 1.49e-17 | 2 |
skin epidermis | 2.19e-13 | 15 |
outer epithelium | 2.19e-13 | 15 |
enveloping layer of ectoderm | 2.19e-13 | 15 |
tongue | 2.44e-11 | 3 |
gustatory system | 2.44e-11 | 3 |
future tongue | 2.44e-11 | 3 |
epididymis | 1.69e-09 | 1 |
surface | 1.99e-09 | 1 |
zone of skin | 5.30e-09 | 4 |
urothelium | 2.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.16e-09 | 1 |
keratoacanthoma | 2.16e-09 | 1 |