FFCP PHASE1:Hg19::chr17:38171959..38171970,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1440 | |EntrezGene=1440 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2438 | |HGNC=2438 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=259bp_to_ENST00000479880_5end | |association_with_transcript=259bp_to_ENST00000479880_5end | ||
|cluster_id=chr17:38171959..38171970,+ | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_6_at_CSF3_5end | |description=CAGE_peak_6_at_CSF3_5end | ||
|id=chr17:38171959..38171970,+ | |id=chr17:38171959..38171970,+ | ||
|ontology_enrichment_celltype=CL:0002593!6.72e-11!2;CL:0000515!8.90e-11!4;CL:0005020!1.82e-07!6;CL:0002138!1.82e-07!6;CL:0005022!1.82e-07!6 | |ontology_enrichment_celltype=CL:0002593!6.72e-11!2;CL:0000515!8.90e-11!4;CL:0005020!1.82e-07!6;CL:0002138!1.82e-07!6;CL:0005022!1.82e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002593;5.69e-21;2!CL:0002595;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,6.96e-21,2;CL:0002595,3.49e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002456!6.72e-11!2;UBERON:0000007!7.40e-11!2;UBERON:0000341!1.38e-10!2;UBERON:0004290!1.98e-08!70;UBERON:0002465!1.92e-07!10;UBERON:0001134!4.46e-07!61;UBERON:0002036!4.46e-07!61;UBERON:0003082!4.46e-07!61;UBERON:0000486!8.13e-07!82;UBERON:0002385!8.70e-07!63;UBERON:0001015!8.70e-07!63;UBERON:0000383!8.70e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;9.91e-41;1!UBERON:0000026;9.91e-41;1!UBERON:0008784;9.91e-41;1!UBERON:0006058;9.91e-41;1!UBERON:0003663;9.91e-41;1!UBERON:0004256;9.91e-41;1!UBERON:0004708;9.91e-41;1!UBERON:0002101;9.91e-41;1!UBERON:0004709;9.91e-41;1!UBERON:0002529;9.91e-41;1!UBERON:0010538;9.91e-41;1!UBERON:0003661;9.91e-41;1!UBERON:0010890;9.91e-41;1!UBERON:0002471;9.91e-41;1!UBERON:0001383;9.91e-41;1!UBERON:0010758;9.91e-41;1!UBERON:0010707;9.91e-41;1!UBERON:0000978;9.91e-41;1!UBERON:0002103;9.91e-41;1!UBERON:0001665;9.91e-41;1!UBERON:0003823;9.91e-41;1!UBERON:0000154;9.91e-41;1!UBERON:0010709;9.91e-41;1!UBERON:0005090;3.81e-21;2!UBERON:0001630;3.81e-21;2!UBERON:0000341;5.69e-21;2!UBERON:0000007;5.69e-21;2!UBERON:0002456;5.69e-21;2!UBERON:0003296;3.42e-11;4!UBERON:0010133;3.42e-11;4!UBERON:0001134;5.28e-11;16!UBERON:0002036;5.28e-11;16!UBERON:0003834;3.22e-09;5!UBERON:0001533;3.22e-09;5!UBERON:0000974;6.78e-08;6!UBERON:0001894;6.04e-07;7!UBERON:0003513;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,9.91e-41,1;UBERON:0001389,9.91e-41,1;UBERON:0000026,9.91e-41,1;UBERON:0008784,9.91e-41,1;UBERON:0006058,9.91e-41,1;UBERON:0003663,9.91e-41,1;UBERON:0004256,9.91e-41,1;UBERON:0004708,9.91e-41,1;UBERON:0002101,9.91e-41,1;UBERON:0004709,9.91e-41,1;UBERON:0002529,9.91e-41,1;UBERON:0010538,9.91e-41,1;UBERON:0003661,9.91e-41,1;UBERON:0010890,9.91e-41,1;UBERON:0002471,9.91e-41,1;UBERON:0001383,9.91e-41,1;UBERON:0004357,9.91e-41,1;UBERON:0004347,9.91e-41,1;UBERON:0005420,9.91e-41,1;UBERON:0005732,9.91e-41,1;UBERON:0010758,9.91e-41,1;UBERON:0010707,9.91e-41,1;UBERON:0000978,9.91e-41,1;UBERON:0002103,9.91e-41,1;UBERON:0001665,9.91e-41,1;UBERON:0003823,9.91e-41,1;UBERON:0000154,9.91e-41,1;UBERON:0010709,9.91e-41,1;UBERON:0005733,9.91e-41,1;UBERON:0005730,9.91e-41,1;UBERON:0005090,3.81e-21,2;UBERON:0001630,3.81e-21,2;UBERON:0000341,4.66e-21,2;UBERON:0000007,5.70e-21,2;UBERON:0002456,6.96e-21,2;UBERON:0003296,3.42e-11,4;UBERON:0010133,3.42e-11,4;UBERON:0003834,3.49e-09,5;UBERON:0001533,3.49e-09,5;UBERON:0001894,6.04e-07,7;UBERON:0006222,6.04e-07,7;UBERON:0003513,6.39e-07,7 | |||
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|short_description=p6@CSF3 | |short_description=p6@CSF3 | ||
}} | }} |
Latest revision as of 23:36, 19 September 2015
Short description: | p6@CSF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CSF3_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 259bp_to_ENST00000479880_5end |
EntrezGene: | CSF3 |
HGNC: | 2438 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 6.96e-21 | 2 |
smooth muscle cell of the subclavian artery | 3.49e-09 | 5 |