FFCP PHASE1:Hg19::chr11:71900651..71900661,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2348 | |EntrezGene=2348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3791 | |HGNC=3791 | ||
|TSSclassifier=strong | |||
|UniProt=P15328 | |UniProt=P15328 | ||
|association_with_transcript=49bp_to_ENST00000312293,NM_016724,NM_016725,uc001orz.1,uc001osa.1_5end | |association_with_transcript=49bp_to_ENST00000312293,NM_016724,NM_016725,uc001orz.1,uc001osa.1_5end | ||
|cluster_id=chr11:71900651..71900661,+ | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_7_at_FOLR1_5end | |description=CAGE_peak_7_at_FOLR1_5end | ||
|id=chr11:71900651..71900661,+ | |id=chr11:71900651..71900661,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.37e-11!7;CL:0000586!2.37e-11!7;CL:0002541!5.82e-11!3;CL:0002150!2.02e-09!3;CL:0000861!2.02e-09!3 | |ontology_enrichment_celltype=CL:0000039!2.37e-11!7;CL:0000586!2.37e-11!7;CL:0002541!5.82e-11!3;CL:0002150!2.02e-09!3;CL:0000861!2.02e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.17e-35;3!CL:0000039;6.13e-16;7!CL:0000586;6.13e-16;7!CL:0000313;6.42e-13;1!CL:0002253;2.82e-07;2!CL:0000159;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.72e-36,3;CL:0000039,5.55e-16,7;CL:0000586,5.55e-16,7;CL:0000313,1.09e-12,1;CL:0002253,3.09e-07,2;CL:0000159,5.60e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;2.78e-13;1!DOID:10165;2.78e-13;1!DOID:1798;2.78e-13;1!DOID:2152;6.42e-13;1!DOID:3095;6.41e-09;22!DOID:2994;6.41e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.32e-13,1;DOID:10165,2.32e-13,1;DOID:1798,2.32e-13,1;DOID:2152,1.09e-12,1;DOID:3095,6.22e-09,22;DOID:2994,6.22e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0003124!8.85e-12!7;UBERON:0000476!5.82e-11!3;UBERON:0000920!5.82e-11!3;UBERON:0001896!1.30e-10!3;UBERON:0005290!1.30e-10!3;UBERON:0010096!1.30e-10!3;UBERON:0005631!1.66e-10!14;UBERON:0000158!1.66e-10!14 | |ontology_enrichment_uberon=UBERON:0003124!8.85e-12!7;UBERON:0000476!5.82e-11!3;UBERON:0000920!5.82e-11!3;UBERON:0001896!1.30e-10!3;UBERON:0005290!1.30e-10!3;UBERON:0010096!1.30e-10!3;UBERON:0005631!1.66e-10!14;UBERON:0000158!1.66e-10!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.17e-35;3!UBERON:0000920;1.17e-35;3!UBERON:0001896;1.27e-16;3!UBERON:0005290;1.27e-16;3!UBERON:0004911;6.42e-13;1!UBERON:0005631;3.68e-11;10!UBERON:0000158;3.68e-11;10!UBERON:0002298;8.91e-09;6!UBERON:0004909;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.72e-36,3;UBERON:0001896,9.26e-17,3;UBERON:0005290,9.26e-17,3;UBERON:0010096,9.26e-17,3;UBERON:0003124,9.67e-16,7;UBERON:0004911,1.09e-12,1;UBERON:0002298,7.62e-09,6;UBERON:0005631,3.77e-08,14;UBERON:0000158,3.77e-08,14;UBERON:0004909,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0.413509717453592,0,0,0.0852266274161009,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,1.61394733071642,4.48788222048861,3.15077378573823,1.5950057986596,3.48070854927077,1.5991043280559,0,0,0,0,0,0,0,0,0,0.489698424477443,2.12029607150911,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.387025325156341,0.219267951258557,0.0821154570532092,0,0,0.225980740780532,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,1.10327990218877,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,2.86704597845036,1.88579387612649,0.310482014706917,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,1.98916222116275,0,0,0,2.88097363929565,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0.280272163313789,0,1.51149313853035,0,1.42953088353313,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0,0,1.00669888618013,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,2.4072715192173,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0.413509717453592,0,0,0.0852266274161009,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,1.61394733071642,4.48788222048861,3.15077378573823,1.5950057986596,3.48070854927077,1.5991043280559,0,0,0,0,0,0,0,0,0,0.489698424477443,2.12029607150911,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.387025325156341,0.219267951258557,0.0821154570532092,0,0,0.225980740780532,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,1.10327990218877,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,2.86704597845036,1.88579387612649,0.310482014706917,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,1.98916222116275,0,0,0,2.88097363929565,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0.280272163313789,0,1.51149313853035,0,1.42953088353313,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0,0,1.00669888618013,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,2.4072715192173,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@FOLR1 | |short_description=p7@FOLR1 | ||
}} | }} |
Latest revision as of 00:42, 20 September 2015
Short description: | p7@FOLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FOLR1_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 49bp_to_ENST00000312293, NM_016724, NM_016725, uc001orz.1, uc001osa.1_5end |
EntrezGene: | FOLR1 |
HGNC: | 3791 |
UniProt: | P15328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.72e-36 | 3 |
germ line cell | 5.55e-16 | 7 |
germ cell | 5.55e-16 | 7 |
serous secreting cell | 1.09e-12 | 1 |
epithelial cell of large intestine | 3.09e-07 | 2 |
seromucus secreting cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.72e-36 | 3 |
medulla oblongata | 9.26e-17 | 3 |
myelencephalon | 9.26e-17 | 3 |
future myelencephalon | 9.26e-17 | 3 |
chorion | 9.67e-16 | 7 |
epithelium of female gonad | 1.09e-12 | 1 |
brainstem | 7.62e-09 | 6 |
extraembryonic membrane | 3.77e-08 | 14 |
membranous layer | 3.77e-08 | 14 |
epithelium of gonad | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.32e-13 | 1 |
endocrine pancreas cancer | 2.32e-13 | 1 |
pancreatic endocrine carcinoma | 2.32e-13 | 1 |
ovary epithelial cancer | 1.09e-12 | 1 |
germ cell and embryonal cancer | 6.22e-09 | 22 |
germ cell cancer | 6.22e-09 | 22 |