FFCP PHASE1:Hg19::chr14:42077438..42077542,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:42077438..42077542,+ to FFCP PHASE1:Hg19::chr14:42077438..42077542,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=145581 | |EntrezGene=145581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20360 | |HGNC=20360 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000555279_5end | |||
|cluster_id=chr14:42077438..42077542,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_LRFN5_5end | |||
|id=chr14:42077438..42077542,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.25e-17;82!UBERON:0006215;1.30e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.88e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.52e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.73e-47!94;UBERON:0001016!6.73e-47!94;UBERON:0001017!2.73e-46!82;UBERON:0005743!3.71e-46!86;UBERON:0001049!1.37e-44!57;UBERON:0005068!1.37e-44!57;UBERON:0006241!1.37e-44!57;UBERON:0007135!1.37e-44!57;UBERON:0000955!5.74e-40!69;UBERON:0006238!5.74e-40!69;UBERON:0002616!8.18e-40!59;UBERON:0002346!3.51e-37!90;UBERON:0002780!4.50e-37!41;UBERON:0001890!4.50e-37!41;UBERON:0006240!4.50e-37!41;UBERON:0007023!4.80e-37!115;UBERON:0003080!7.80e-36!42;UBERON:0003075!8.22e-34!86;UBERON:0007284!8.22e-34!86;UBERON:0002020!2.22e-32!34;UBERON:0003528!2.22e-32!34;UBERON:0001893!2.27e-32!34;UBERON:0002791!3.59e-31!33;UBERON:0001869!9.41e-31!32;UBERON:0000924!2.00e-29!173;UBERON:0006601!2.00e-29!173;UBERON:0002619!2.81e-28!22;UBERON:0004121!9.90e-27!169;UBERON:0001950!5.68e-26!20;UBERON:0003056!8.00e-25!61;UBERON:0000956!7.16e-24!25;UBERON:0000203!7.16e-24!25;UBERON:0000033!8.83e-22!123;UBERON:0000153!1.79e-21!129;UBERON:0007811!1.79e-21!129;UBERON:0000922!2.94e-12!612;UBERON:0000475!4.90e-11!365;UBERON:0000481!5.12e-11!347;UBERON:0002050!1.17e-10!605;UBERON:0005423!1.17e-10!605;UBERON:0001871!1.32e-10!7;UBERON:0000923!2.95e-10!604;UBERON:0005291!2.95e-10!604;UBERON:0006598!2.95e-10!604;UBERON:0002532!2.95e-10!604;UBERON:0002420!4.16e-10!9;UBERON:0007245!4.16e-10!9;UBERON:0010009!4.16e-10!9;UBERON:0010011!4.16e-10!9;UBERON:0000454!4.16e-10!9;UBERON:0002308!6.83e-10!9;UBERON:0000125!6.83e-10!9;UBERON:0003076!7.64e-10!15;UBERON:0003057!7.64e-10!15;UBERON:0000483!1.18e-09!309;UBERON:0000064!1.84e-09!219;UBERON:0000119!2.56e-09!312;UBERON:0000025!4.54e-09!194;UBERON:0000477!1.09e-08!286;UBERON:0000200!1.19e-08!6;UBERON:0000468!2.19e-08!659;UBERON:0004111!2.52e-08!241;UBERON:0009663!7.02e-08!7;UBERON:0002021!1.39e-07!5;UBERON:0000062!1.72e-07!511;UBERON:0001872!2.13e-07!5;UBERON:0000349!2.96e-07!5;UBERON:0004733!3.04e-07!12;UBERON:0002028!3.04e-07!12;UBERON:0007277!3.04e-07!12;UBERON:0002298!4.92e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.96e-55;22!UBERON:0001950;1.77e-50;20!UBERON:0001869;1.76e-48;32!UBERON:0000956;6.60e-48;25!UBERON:0000203;6.60e-48;25!UBERON:0003528;6.75e-47;34!UBERON:0002020;6.75e-47;34!UBERON:0001893;4.52e-46;34!UBERON:0002780;1.41e-45;41!UBERON:0001890;1.41e-45;41!UBERON:0002791;3.93e-45;32!UBERON:0000073;4.33e-43;53!UBERON:0002616;4.33e-43;53!UBERON:0000955;1.32e-31;68!UBERON:0001017;4.52e-30;75!UBERON:0001016;1.43e-26;83!UBERON:0001871;2.07e-17;6!UBERON:0000200;1.05e-15;6!UBERON:0004733;3.95e-14;12!UBERON:0002028;3.95e-14;12!UBERON:0002021;1.38e-13;5!UBERON:0002298;1.55e-13;6!UBERON:0001872;3.16e-13;5!UBERON:0000349;6.04e-13;5!UBERON:0004732;6.71e-13;13!UBERON:0011216;6.84e-13;132!UBERON:0007023;6.04e-12;114!UBERON:0001894;3.50e-11;7!UBERON:0002784;1.37e-09;4!UBERON:0002420;3.45e-09;9!UBERON:0007245;3.45e-09;9!UBERON:0010009;3.45e-09;9!UBERON:0010011;3.45e-09;9!UBERON:0000454;3.45e-09;9!UBERON:0002680;5.97e-09;9!UBERON:0001895;5.97e-09;9!UBERON:0000125;6.47e-09;9!UBERON:0002308;6.47e-09;9!UBERON:0001870;9.56e-09;3!UBERON:0000988;7.01e-08;3!UBERON:0001896;2.52e-07;3!UBERON:0005290;2.52e-07;3!UBERON:0002050;2.67e-07;5!UBERON:0005423;2.67e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.31e-80,56;UBERON:0005068,2.31e-80,56;UBERON:0006241,2.31e-80,56;UBERON:0007135,2.31e-80,56;UBERON:0000073,7.52e-78,53;UBERON:0002616,7.52e-78,53;UBERON:0001017,7.24e-70,81;UBERON:0001016,2.25e-69,89;UBERON:0000955,3.68e-69,68;UBERON:0006238,3.68e-69,68;UBERON:0002780,1.65e-64,41;UBERON:0001890,1.65e-64,41;UBERON:0003080,1.65e-64,41;UBERON:0006240,1.65e-64,41;UBERON:0002346,3.35e-55,86;UBERON:0002619,4.11e-55,22;UBERON:0001869,1.44e-54,32;UBERON:0003528,1.90e-54,34;UBERON:0002020,1.90e-54,34;UBERON:0001893,1.97e-54,34;UBERON:0003075,7.14e-51,82;UBERON:0007284,7.14e-51,82;UBERON:0001950,1.81e-50,20;UBERON:0002791,2.37e-50,32;UBERON:0000956,6.82e-48,25;UBERON:0000203,6.82e-48,25;UBERON:0010371,2.93e-43,104;UBERON:0003056,3.56e-40,61;UBERON:0007023,3.83e-40,114;UBERON:0004121,4.92e-38,171;UBERON:0000924,4.92e-38,171;UBERON:0006601,4.92e-38,171;UBERON:0011216,2.19e-32,223;UBERON:0010314,2.69e-28,132;UBERON:0001871,2.23e-17,6;UBERON:0000025,3.37e-17,192;UBERON:0003076,1.58e-16,15;UBERON:0003057,1.58e-16,15;UBERON:0000200,1.03e-15,6;UBERON:0004111,3.19e-14,240;UBERON:0004733,3.77e-14,12;UBERON:0002028,3.77e-14,12;UBERON:0007277,3.77e-14,12;UBERON:0002298,1.37e-13,6;UBERON:0002021,1.38e-13,5;UBERON:0001872,3.21e-13,5;UBERON:0000349,6.20e-13,5;UBERON:0004732,6.43e-13,13;UBERON:0001894,3.45e-11,7;UBERON:0006222,3.45e-11,7;UBERON:0000483,1.04e-10,306;UBERON:0000119,1.79e-10,309;UBERON:0002784,1.10e-09,4;UBERON:0002420,2.95e-09,9;UBERON:0007245,2.95e-09,9;UBERON:0010009,2.95e-09,9;UBERON:0010011,2.95e-09,9;UBERON:0000454,2.95e-09,9;UBERON:0000125,5.76e-09,9;UBERON:0002308,5.76e-09,9;UBERON:0002680,6.48e-09,9;UBERON:0001895,6.48e-09,9;UBERON:0010092,6.48e-09,9;UBERON:0002050,7.54e-09,564;UBERON:0001870,9.34e-09,3;UBERON:0000923,1.64e-08,560;UBERON:0010316,1.64e-08,560;UBERON:0005291,1.64e-08,560;UBERON:0006598,1.64e-08,560;UBERON:0010317,1.64e-08,560;UBERON:0002532,1.64e-08,560;UBERON:0005423,4.85e-08,581;UBERON:0000988,7.53e-08,3;UBERON:0000922,1.53e-07,592;UBERON:0001896,2.08e-07,3;UBERON:0005290,2.08e-07,3;UBERON:0010096,2.08e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,1.98026164736075,1.65698687863958,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,1.15235184896,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,1.54657762555539,0.837581326671744,0,0,0,0,0.858840442033979,1.00034104211935,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.410635780069046,0,0,0,0,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0.214840489736547,0.290033387828457,0.170453254832202,0,0,0,0,0,0,0.31481234683064,1.3940745403212,0,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0.551365343546124,0,0,0.578775534266688,1.9676842561399,0,0,0,0,0,0,1.77380532035299,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0.307160702099232,9.94147647766298,8.15882615180974,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,1.87422470710174,0,0,8.72399471485697,7.79252024559551,7.98455192004777,0,0,0,0,0,0,1.72371686620732,4.08246458736556,0.347249989866585,0.885741385813839,4.94445398364173,4.5774520895125,2.54332297841817,3.54657142744257,7.89787429754301,0,0,2.15460723810632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.0884575645033392,0.611030144933625,0,0,0,1.28062152663286,0,2.34264445725339,0,0,0,0.394584402849391,3.62972148145992,9.48825561054519,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.193978032976839,0,0.90392296312213,0,0,13.042023966911,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0,0,0.288950589901519,1.80126086612937,0.821432273351958,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,14.3141344165675,5.5843396505746,0.643012593860077,0,0,0,0,11.8461635483148,0,0,0.157363764404994,0,0,0,0,0,0,0,0,1.30634944043764,0,0,0,0,0,0,4.65418642901582,3.43804764530994,0,0,0.213574825135389,0.943225830597996,0.828478110694391,0,0,0,0,0,0,0,0,0,14.1770908794718,12.4466790200002,8.88855608016149,2.86704597845036,2.21858103073705,2.91853093824502,0,0.124980407962107,0,0,0,3.27834434064817,2.02889440055155,0,0,0,0.568209015825267,0,0.889811221596536,0,0,0,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.53983209446942,0,0.132864840313363,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,2.372145850727,2.67352101155024,0,3.90384818894258,4.88922316233871,0.247871528518004,1.67593475391973,0,0,5.60399523799829,0,0,8.67094538802204,11.3357261060468,10.3762008387148,13.1274473114083,34.7858940785971,12.7940917058803,11.4647708398614,0,0,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0,0,0,0,12.0216900620742,7.02970288752463,9.92096623205684,10.1465296310251,31.1775641140385,0,0,1.75871244359621,0.127762427639595,8.57122937405259,5.71682327772001,1.21393120847326,0,0,0,0,6.79697329768317,11.6417809206243,0,0,2.11931350696388,4.87058328739606,0,0.913158720509496,0,0,0.929195074296532,0,3.71972561178001,0.173858272302579,0,0,0,0,0,0.236664001461131,0.0852134047591577,1.69354820076372,0,0,0,0,0,0,0,0,1.1598144313382,3.88568794447312,0,0,0.713520544665411,0,0.329821550236287,0.150962843566674,0.0771741581079447,0.874238242015829,0,5.63841140033983,0,2.55201007249429,0.891139200981258,5.0718687310008,0,0.0939839179798536,0.193373663920732,0,0,0,0,0.730336388246517,0,0.716697915757256,0,11.6265448226464,20.9448331363381,1.0580536810308,0,0,0,0,0,0,0,0,0.275684698604535,0.250707539292375,0.151557396436479,0.267964130156178,2.48750831837634,1.86179392551411,0,0.476128862927481,0,0.31037357147929,0.112131862580613,0,0.202117188958219,0,0,0.202056159043763,0.215166616178029,0.99798106963804,0,0.106727345877715,3.8614456457388,0,0,0.855690109280065,1.22068853494722,2.66302709674205,0,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| ||
|short_description=p1@LRFN5 | |||
}} | }} |
Latest revision as of 00:55, 20 September 2015
Short description: | p1@LRFN5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRFN5_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000555279_5end |
EntrezGene: | LRFN5 |
HGNC: | 20360 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuroectodermal tumor | 1.52e-07 | 10 |