FFCP PHASE1:Hg19::chr12:6745254..6745265,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57121 | |EntrezGene=57121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13307 | |HGNC=13307 | ||
|TSSclassifier=strong | |||
|UniProt=Q5KU18,Q9H1C0 | |UniProt=Q5KU18,Q9H1C0 | ||
|association_with_transcript=31bp_to_NM_020400,uc001qps.2_5end | |||
|cluster_id=chr12:6745254..6745265,- | |||
|description=CAGE_peak_8_at_LPAR5_5end | |||
|id=chr12:6745254..6745265,- | |||
|ontology_enrichment_celltype=CL:0002274!2.04e-11!5;CL:0000457!2.04e-11!5;CL:0002191!2.04e-11!5;CL:0000097!2.04e-11!5;CL:0000831!2.04e-11!5;CL:0002028!2.04e-11!5;CL:0000763!4.39e-07!112;CL:0000049!4.39e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0001014;6.85e-14;2!CL:0001016;6.85e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.30e-14,2;CL:0001016,7.30e-14,2;CL:0000763,2.73e-08,108;CL:0000049,2.73e-08,108 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.47e-09;3!UBERON:0003057;1.47e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;2.49e-13;8!DOID:8692;9.78e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.49e-13,8;DOID:8692,6.85e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-33!115;UBERON:0001049!7.59e-20!57;UBERON:0005068!7.59e-20!57;UBERON:0006241!7.59e-20!57;UBERON:0007135!7.59e-20!57;UBERON:0001893!5.09e-18!34;UBERON:0002780!9.36e-18!41;UBERON:0001890!9.36e-18!41;UBERON:0006240!9.36e-18!41;UBERON:0002020!1.76e-17!34;UBERON:0003528!1.76e-17!34;UBERON:0003080!3.40e-17!42;UBERON:0002616!3.61e-17!59;UBERON:0002791!1.17e-16!33;UBERON:0003075!2.40e-16!86;UBERON:0007284!2.40e-16!86;UBERON:0001869!2.58e-15!32;UBERON:0002346!3.19e-15!90;UBERON:0005743!9.08e-15!86;UBERON:0001017!9.51e-15!82;UBERON:0000955!1.52e-14!69;UBERON:0006238!1.52e-14!69;UBERON:0000073!1.37e-12!94;UBERON:0001016!1.37e-12!94;UBERON:0002619!6.15e-12!22;UBERON:0001950!2.98e-11!20;UBERON:0003056!3.70e-11!61;UBERON:0000153!1.43e-10!129;UBERON:0007811!1.43e-10!129;UBERON:0000956!3.43e-10!25;UBERON:0000203!3.43e-10!25;UBERON:0002308!1.06e-09!9;UBERON:0000125!1.06e-09!9;UBERON:0000033!3.45e-09!123;UBERON:0004121!9.55e-09!169;UBERON:0000200!2.39e-08!6;UBERON:0000924!2.52e-08!173;UBERON:0006601!2.52e-08!173;UBERON:0002298!3.79e-08!8;UBERON:0002420!1.20e-07!9;UBERON:0007245!1.20e-07!9;UBERON:0010009!1.20e-07!9;UBERON:0010011!1.20e-07!9;UBERON:0000454!1.20e-07!9;UBERON:0002771!4.85e-07!3;UBERON:0009663!5.43e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;6.72e-26;1!UBERON:0011215;6.72e-26;1!UBERON:0001018;6.72e-26;1!UBERON:0002473;6.72e-26;1!UBERON:0005340;6.72e-26;1!UBERON:0003544;6.72e-26;1!UBERON:0005970;6.72e-26;1!UBERON:0002316;6.72e-26;1!UBERON:0001020;6.72e-26;1!UBERON:0002437;6.72e-26;1!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0002240;1.47e-09;3!UBERON:0005174;1.47e-09;3!UBERON:0001137;1.47e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,1.26e-25,1;UBERON:0011215,1.26e-25,1;UBERON:0001018,1.26e-25,1;UBERON:0002473,1.26e-25,1;UBERON:0005340,1.26e-25,1;UBERON:0003544,1.26e-25,1;UBERON:0005970,1.26e-25,1;UBERON:0002316,1.26e-25,1;UBERON:0001020,1.26e-25,1;UBERON:0002437,1.26e-25,1;UBERON:0005162,1.55e-13,2;UBERON:0000122,1.55e-13,2;UBERON:0002240,1.19e-09,3;UBERON:0005174,1.19e-09,3;UBERON:0001137,1.19e-09,3 | |||
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| ||
|short_description=p8@LPAR5 | |||
}} | }} |
Latest revision as of 00:59, 20 September 2015
Short description: | p8@LPAR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LPAR5_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_NM_020400, uc001qps.2_5end |
EntrezGene: | LPAR5 |
HGNC: | 13307 |
UniProt: | Q5KU18Q9H1C0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.30e-14 | 2 |
immature CD1a-positive Langerhans cell | 7.30e-14 | 2 |
myeloid cell | 2.73e-08 | 108 |
common myeloid progenitor | 2.73e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 1.26e-25 | 1 |
central nervous system cell part cluster | 1.26e-25 | 1 |
axon tract | 1.26e-25 | 1 |
intercerebral commissure | 1.26e-25 | 1 |
dorsal telencephalic commissure | 1.26e-25 | 1 |
brain white matter | 1.26e-25 | 1 |
brain commissure | 1.26e-25 | 1 |
white matter | 1.26e-25 | 1 |
nervous system commissure | 1.26e-25 | 1 |
cerebral hemisphere white matter | 1.26e-25 | 1 |
multi cell component structure | 1.55e-13 | 2 |
neuron projection bundle | 1.55e-13 | 2 |
spinal cord | 1.19e-09 | 3 |
dorsal region element | 1.19e-09 | 3 |
dorsum | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.49e-13 | 8 |
myeloid leukemia | 6.85e-08 | 31 |