FFCP PHASE1:Hg19::chr14:45565517..45565522,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55015 | |EntrezGene=55015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20314 | |HGNC=20314 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1P0 | |UniProt=F5H1P0 | ||
|association_with_transcript=-352bp_to_ENST00000355846_5end | |association_with_transcript=-352bp_to_ENST00000355846_5end | ||
|cluster_id=chr14:45565517..45565522,+ | |||
|description=CAGE_peak_2_at_PRPF39_5end | |description=CAGE_peak_2_at_PRPF39_5end | ||
|id=chr14:45565517..45565522,+ | |id=chr14:45565517..45565522,+ | ||
|ontology_enrichment_celltype=CL:0000838!6.73e-09!52;CL:0000542!1.18e-08!53;CL:0000051!1.18e-08!53 | |ontology_enrichment_celltype=CL:0000838!6.73e-09!52;CL:0000542!1.18e-08!53;CL:0000051!1.18e-08!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.57e-09,52;CL:0000542,6.38e-09,53;CL:0000051,6.38e-09,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.01e-12!57;UBERON:0005068!5.01e-12!57;UBERON:0006241!5.01e-12!57;UBERON:0007135!5.01e-12!57;UBERON:0002616!2.40e-11!59;UBERON:0002780!2.54e-11!41;UBERON:0001890!2.54e-11!41;UBERON:0006240!2.54e-11!41;UBERON:0001017!3.31e-11!82;UBERON:0000073!3.60e-11!94;UBERON:0001016!3.60e-11!94;UBERON:0003080!4.95e-11!42;UBERON:0005743!5.60e-11!86;UBERON:0000955!1.01e-10!69;UBERON:0006238!1.01e-10!69;UBERON:0001893!1.54e-10!34;UBERON:0002020!1.87e-10!34;UBERON:0003528!1.87e-10!34;UBERON:0002791!3.54e-10!33;UBERON:0007023!4.26e-10!115;UBERON:0001869!1.85e-09!32;UBERON:0002346!9.53e-08!90;UBERON:0000924!4.15e-07!173;UBERON:0006601!4.15e-07!173;UBERON:0000956!5.47e-07!25;UBERON:0000203!5.47e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.22e-09;34!UBERON:0003528;2.58e-09;34!UBERON:0002020;2.58e-09;34!UBERON:0002791;5.93e-09;32!UBERON:0002780;8.55e-09;41!UBERON:0001890;8.55e-09;41!UBERON:0001869;1.24e-08;32!UBERON:0000073;2.35e-08;53!UBERON:0002616;2.35e-08;53!UBERON:0000956;3.08e-07;25!UBERON:0000203;3.08e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.97e-12,56;UBERON:0005068,2.97e-12,56;UBERON:0006241,2.97e-12,56;UBERON:0007135,2.97e-12,56;UBERON:0000073,5.04e-12,53;UBERON:0002616,5.04e-12,53;UBERON:0002780,2.65e-11,41;UBERON:0001890,2.65e-11,41;UBERON:0003080,2.65e-11,41;UBERON:0006240,2.65e-11,41;UBERON:0001016,4.37e-11,89;UBERON:0001017,5.97e-11,81;UBERON:0000955,1.09e-10,68;UBERON:0006238,1.09e-10,68;UBERON:0001893,1.52e-10,34;UBERON:0003528,1.86e-10,34;UBERON:0002020,1.86e-10,34;UBERON:0007023,1.12e-09,114;UBERON:0002791,1.26e-09,32;UBERON:0001869,1.92e-09,32;UBERON:0002346,3.01e-08,86;UBERON:0004121,2.92e-07,171;UBERON:0000924,2.92e-07,171;UBERON:0006601,2.92e-07,171;UBERON:0003075,5.39e-07,82;UBERON:0007284,5.39e-07,82;UBERON:0000956,6.50e-07,25;UBERON:0000203,6.50e-07,25 | |||
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| ||
|short_description=p2@PRPF39 | |short_description=p2@PRPF39 | ||
}} | }} |
Latest revision as of 01:13, 20 September 2015
Short description: | p2@PRPF39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRPF39_5end |
Coexpression cluster: | NA |
Association with transcript: | -352bp_to_ENST00000355846_5end |
EntrezGene: | PRPF39 |
HGNC: | 20314 |
UniProt: | F5H1P0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.57e-09 | 52 |
lymphocyte | 6.38e-09 | 53 |
common lymphoid progenitor | 6.38e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.97e-12 | 56 |
neural rod | 2.97e-12 | 56 |
future spinal cord | 2.97e-12 | 56 |
neural keel | 2.97e-12 | 56 |
regional part of nervous system | 5.04e-12 | 53 |
regional part of brain | 5.04e-12 | 53 |
regional part of forebrain | 2.65e-11 | 41 |
forebrain | 2.65e-11 | 41 |
anterior neural tube | 2.65e-11 | 41 |
future forebrain | 2.65e-11 | 41 |
nervous system | 4.37e-11 | 89 |
central nervous system | 5.97e-11 | 81 |
brain | 1.09e-10 | 68 |
future brain | 1.09e-10 | 68 |
telencephalon | 1.52e-10 | 34 |
brain grey matter | 1.86e-10 | 34 |
gray matter | 1.86e-10 | 34 |
adult organism | 1.12e-09 | 114 |
regional part of telencephalon | 1.26e-09 | 32 |
cerebral hemisphere | 1.92e-09 | 32 |
neurectoderm | 3.01e-08 | 86 |
ectoderm-derived structure | 2.92e-07 | 171 |
ectoderm | 2.92e-07 | 171 |
presumptive ectoderm | 2.92e-07 | 171 |
neural plate | 5.39e-07 | 82 |
presumptive neural plate | 5.39e-07 | 82 |
cerebral cortex | 6.50e-07 | 25 |
pallium | 6.50e-07 | 25 |