FFCP PHASE1:Hg19::chr12:67663079..67663088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55832 | |EntrezGene=55832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30688 | |HGNC=30688 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VP6 | |UniProt=Q86VP6 | ||
|association_with_transcript=18bp_to_ENST00000545606,NM_018448,uc001stn.2_5end | |association_with_transcript=18bp_to_ENST00000545606,NM_018448,uc001stn.2_5end | ||
|cluster_id=chr12:67663079..67663088,+ | |||
|description=CAGE_peak_11_at_CAND1_5end | |description=CAGE_peak_11_at_CAND1_5end | ||
|id=chr12:67663079..67663088,+ | |id=chr12:67663079..67663088,+ | ||
|ontology_enrichment_celltype=CL:0000039!7.18e-07!7;CL:0000586!7.18e-07!7 | |ontology_enrichment_celltype=CL:0000039!7.18e-07!7;CL:0000586!7.18e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.20e-23;7!CL:0000586;1.20e-23;7!CL:0002322;1.51e-21;5!CL:0000540;8.54e-11;6!CL:0000404;8.54e-11;6!CL:0000167;5.20e-08;1!CL:0000164;5.20e-08;1!CL:0000502;5.20e-08;1!CL:0000172;5.20e-08;1!CL:0002553;5.20e-08;1!CL:0000173;5.20e-08;1!CL:0002321;2.75e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.82e-23,7;CL:0000586,1.82e-23,7;CL:0002322,6.84e-22,5;CL:0000047,8.93e-14,8;CL:0000540,8.17e-11,6;CL:0000031,8.17e-11,6;CL:0000404,8.17e-11,6;CL:0002553,3.11e-08,1;CL:0000167,7.10e-08,1;CL:0000164,7.10e-08,1;CL:0000502,7.10e-08,1;CL:0000172,7.10e-08,1;CL:0000173,7.10e-08,1;CL:0002351,7.10e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.56e-32;10!UBERON:0005564;4.56e-32;10!CL:0000031;8.54e-11;6!CL:0002351;5.20e-08;1 | |||
|ontology_enrichment_disease=DOID:162!6.86e-13!235;DOID:14566!3.22e-12!239;DOID:0050686!1.19e-09!137;DOID:0050687!8.45e-09!143;DOID:305!1.29e-07!106 | |ontology_enrichment_disease=DOID:162!6.86e-13!235;DOID:14566!3.22e-12!239;DOID:0050686!1.19e-09!137;DOID:0050687!8.45e-09!143;DOID:305!1.29e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.12e-14;22!DOID:2994;5.12e-14;22!DOID:1325;3.88e-09;7!DOID:3904;3.88e-09;7!DOID:1799;5.20e-08;1!DOID:10165;5.20e-08;1!DOID:1798;5.20e-08;1!DOID:4430;5.20e-08;1!DOID:1324;2.75e-07;15!DOID:0050615;7.76e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.65e-14,22;DOID:2994,5.65e-14,22;DOID:1325,5.84e-09,7;DOID:3904,5.84e-09,7;DOID:1799,3.34e-08,1;DOID:10165,3.34e-08,1;DOID:1798,3.34e-08,1;DOID:4430,7.10e-08,1;DOID:0050687,1.46e-07,143;DOID:1324,3.11e-07,15;DOID:305,6.71e-07,106;DOID:0050615,8.69e-07,16 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.83e-30;8!UBERON:0003135;1.53e-21;11!UBERON:0000991;7.31e-15;21!UBERON:0003101;1.60e-10;22!UBERON:0000079;1.60e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.34e-29,8;UBERON:0003135,2.06e-21,11;UBERON:0000991,7.29e-15,21;UBERON:0009196,7.29e-15,21;UBERON:0009117,7.29e-15,21;UBERON:0005564,7.29e-15,21;UBERON:0004176,3.76e-14,22;UBERON:0003101,1.85e-10,22;UBERON:0000079,1.85e-10,22;UBERON:0004458,1.13e-09,49;UBERON:0002323,3.10e-08,46;UBERON:0003886,7.56e-07,54 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0.376627918784408,0.229240217243854,0.246301768349837,0.314843125254717,0,0,0,0,0,0,0.92960640696362,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0.167186495390678,0.32592226663359,0.473447805734733,0,0,0.589211814949674,0.221533894583621,0.270803863765016,0.25618263945135,0.130059347559878,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.453237370790265,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0,0,0.534880391567015,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.189069634328136,0,0.790513071238134,0.654895377488563,0.364295288292542,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.61417158655884,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0.506328996723799,0,0,0.0920498986422993,0,0.710019185033229,0,0.169560592310488,0.193260853163297,0,0,1.70763188581434,1.98794652482228,1.51052125730374,0.932949495138334,1.00928340350251,1.09493207722749,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,1.32438929824395,0.245976877086227,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.352226082707465,0,0,0.190254152234598,0,1.71697232418975,0,0,0.148631162288728,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0.36669142910475,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0.336255431980582,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0,0,0.604780586659361,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0.116210378459959,0.362578348774867,0.200506470303285,0.184161977871793,0,0,0.131124414959424,0,0.385076685522074,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0.457847324091717,0.41254749960294,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0.572499546967965,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0.589494246078727,0,0,0,0,0,0.349934720244983,0.288666338176536,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0.28853842595289,0.640276590135727,0.478278818186467,0.199579371432817,0.383010740264733,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0.403599414382095,0.425846237690326,0,0.921722292925374,0,0.333698283423817,0.390776190804081,0.556812347790485,0,0.270455678475983,0,0,0,0,0.485442086998054,0.222886768554957,0,0.23874448473769,0.296964680832639,0,0.994147647766298,0.140669416410513,0,0.329607748453519,0.422250816255987,0,0.276283915531148,0.503865495708552,0.102268682502155,0.615424027305347,0,0.269605053441981,0,1.02314474045374,0,0,0,0,0.0927680981618513,0,0.7812832832557,0.174919999992391,0,0.1137934482855,1.01701460117107,1.18193840883968,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.113942055847001,1.1528195219403,0.897576444097721,0.651884231532048,0,0.549585560411174,0,2.04386596391473,0,0.166211681900156,0.451191321234361,0.19606253431774,0.167821586975843,0,0.158936578980379,0.632994193584081,0.163232808159148,0.565412285735763,0.216388639742091,0,0,0,0,0.247127877893006,0.104421949505455,0.067401132980677,0,0,0.364909578431332,0.19566461893209,0,0,0,0.61214552326098,0.063186579628488,0.300646838828985,0.622129148383483,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0.34823682632161,0.17472666824203,0,0.290268993867255,0.146178634172371,0.164230914106418,0,0.08825612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| ||
|short_description=p11@CAND1 | |short_description=p11@CAND1 | ||
}} | }} |
Latest revision as of 01:17, 20 September 2015
Short description: | p11@CAND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CAND1_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000545606, NM_018448, uc001stn.2_5end |
EntrezGene: | CAND1 |
HGNC: | 30688 |
UniProt: | Q86VP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.82e-23 | 7 |
germ cell | 1.82e-23 | 7 |
embryonic stem cell | 6.84e-22 | 5 |
neuronal stem cell | 8.93e-14 | 8 |
neuron | 8.17e-11 | 6 |
neuroblast | 8.17e-11 | 6 |
electrically signaling cell | 8.17e-11 | 6 |
lung fibroblast | 3.11e-08 | 1 |
peptide hormone secreting cell | 7.10e-08 | 1 |
enteroendocrine cell | 7.10e-08 | 1 |
type D enteroendocrine cell | 7.10e-08 | 1 |
somatostatin secreting cell | 7.10e-08 | 1 |
pancreatic D cell | 7.10e-08 | 1 |
progenitor cell of endocrine pancreas | 7.10e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.34e-29 | 8 |
male reproductive organ | 2.06e-21 | 11 |
gonad | 7.29e-15 | 21 |
indifferent external genitalia | 7.29e-15 | 21 |
indifferent gonad | 7.29e-15 | 21 |
gonad primordium | 7.29e-15 | 21 |
external genitalia | 3.76e-14 | 22 |
male organism | 1.85e-10 | 22 |
male reproductive system | 1.85e-10 | 22 |
body cavity or lining | 1.13e-09 | 49 |
body cavity | 3.10e-08 | 46 |
body cavity precursor | 7.56e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.65e-14 | 22 |
germ cell cancer | 5.65e-14 | 22 |
bronchus cancer | 5.84e-09 | 7 |
bronchogenic carcinoma | 5.84e-09 | 7 |
islet cell tumor | 3.34e-08 | 1 |
endocrine pancreas cancer | 3.34e-08 | 1 |
pancreatic endocrine carcinoma | 3.34e-08 | 1 |
somatostatinoma | 7.10e-08 | 1 |
cell type cancer | 1.46e-07 | 143 |
lung cancer | 3.11e-07 | 15 |
carcinoma | 6.71e-07 | 106 |
respiratory system cancer | 8.69e-07 | 16 |