FFCP PHASE1:Hg19::chr1:99772065..99772074,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9890 | |EntrezGene=9890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q3ZCT6 | |UniProt=Q3ZCT6 | ||
|association_with_transcript=-141bp_to_BC041386_5end | |association_with_transcript=-141bp_to_BC041386_5end | ||
|cluster_id=chr1:99772065..99772074,+ | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_13_at_LPPR4_5end | |description=CAGE_peak_13_at_LPPR4_5end | ||
|id=chr1:99772065..99772074,+ | |id=chr1:99772065..99772074,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!5.07e-50!32;UBERON:0001893!6.15e-47!34;UBERON:0002791!3.27e-43!33;UBERON:0002780!3.53e-43!41;UBERON:0001890!3.53e-43!41;UBERON:0006240!3.53e-43!41;UBERON:0003080!4.46e-42!42;UBERON:0002020!7.17e-42!34;UBERON:0003528!7.17e-42!34;UBERON:0002619!3.78e-38!22;UBERON:0000073!1.38e-35!94;UBERON:0001016!1.38e-35!94;UBERON:0001950!1.52e-35!20;UBERON:0005743!9.95e-34!86;UBERON:0000956!1.96e-33!25;UBERON:0000203!1.96e-33!25;UBERON:0001871!2.17e-33!7;UBERON:0001017!1.20e-32!82;UBERON:0003056!5.05e-31!61;UBERON:0001049!4.15e-30!57;UBERON:0005068!4.15e-30!57;UBERON:0006241!4.15e-30!57;UBERON:0007135!4.15e-30!57;UBERON:0000955!1.35e-29!69;UBERON:0006238!1.35e-29!69;UBERON:0002616!5.78e-29!59;UBERON:0003075!3.18e-23!86;UBERON:0007284!3.18e-23!86;UBERON:0000200!3.39e-22!6;UBERON:0002346!5.32e-22!90;UBERON:0002420!1.64e-21!9;UBERON:0007245!1.64e-21!9;UBERON:0010009!1.64e-21!9;UBERON:0010011!1.64e-21!9;UBERON:0000454!1.64e-21!9;UBERON:0000349!5.15e-18!5;UBERON:0004121!1.36e-17!169;UBERON:0002771!3.29e-17!3;UBERON:0000924!4.61e-17!173;UBERON:0006601!4.61e-17!173;UBERON:0000033!1.89e-16!123;UBERON:0000153!1.78e-15!129;UBERON:0007811!1.78e-15!129;UBERON:0007023!1.55e-14!115;UBERON:0000369!6.46e-13!4;UBERON:0002435!6.46e-13!4;UBERON:0000204!6.46e-13!4;UBERON:0010082!6.46e-13!4;UBERON:0009663!1.17e-12!7;UBERON:0001876!2.84e-12!2;UBERON:0002308!7.15e-10!9;UBERON:0000125!7.15e-10!9;UBERON:0005383!1.64e-08!3;UBERON:0005382!1.64e-08!3;UBERON:0000025!7.34e-08!194;UBERON:0001874!3.95e-07!1 | |ontology_enrichment_uberon=UBERON:0001869!5.07e-50!32;UBERON:0001893!6.15e-47!34;UBERON:0002791!3.27e-43!33;UBERON:0002780!3.53e-43!41;UBERON:0001890!3.53e-43!41;UBERON:0006240!3.53e-43!41;UBERON:0003080!4.46e-42!42;UBERON:0002020!7.17e-42!34;UBERON:0003528!7.17e-42!34;UBERON:0002619!3.78e-38!22;UBERON:0000073!1.38e-35!94;UBERON:0001016!1.38e-35!94;UBERON:0001950!1.52e-35!20;UBERON:0005743!9.95e-34!86;UBERON:0000956!1.96e-33!25;UBERON:0000203!1.96e-33!25;UBERON:0001871!2.17e-33!7;UBERON:0001017!1.20e-32!82;UBERON:0003056!5.05e-31!61;UBERON:0001049!4.15e-30!57;UBERON:0005068!4.15e-30!57;UBERON:0006241!4.15e-30!57;UBERON:0007135!4.15e-30!57;UBERON:0000955!1.35e-29!69;UBERON:0006238!1.35e-29!69;UBERON:0002616!5.78e-29!59;UBERON:0003075!3.18e-23!86;UBERON:0007284!3.18e-23!86;UBERON:0000200!3.39e-22!6;UBERON:0002346!5.32e-22!90;UBERON:0002420!1.64e-21!9;UBERON:0007245!1.64e-21!9;UBERON:0010009!1.64e-21!9;UBERON:0010011!1.64e-21!9;UBERON:0000454!1.64e-21!9;UBERON:0000349!5.15e-18!5;UBERON:0004121!1.36e-17!169;UBERON:0002771!3.29e-17!3;UBERON:0000924!4.61e-17!173;UBERON:0006601!4.61e-17!173;UBERON:0000033!1.89e-16!123;UBERON:0000153!1.78e-15!129;UBERON:0007811!1.78e-15!129;UBERON:0007023!1.55e-14!115;UBERON:0000369!6.46e-13!4;UBERON:0002435!6.46e-13!4;UBERON:0000204!6.46e-13!4;UBERON:0010082!6.46e-13!4;UBERON:0009663!1.17e-12!7;UBERON:0001876!2.84e-12!2;UBERON:0002308!7.15e-10!9;UBERON:0000125!7.15e-10!9;UBERON:0005383!1.64e-08!3;UBERON:0005382!1.64e-08!3;UBERON:0000025!7.34e-08!194;UBERON:0001874!3.95e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;2.74e-50;2!UBERON:0001954;4.52e-50;2!UBERON:0003022;4.52e-50;2!UBERON:0002421;4.52e-50;2!UBERON:0002600;4.52e-50;2!UBERON:0000349;5.15e-21;5!UBERON:0002619;2.02e-18;22!UBERON:0000200;7.67e-18;6!UBERON:0000956;1.86e-16;25!UBERON:0000203;1.86e-16;25!UBERON:0001871;1.65e-15;6!UBERON:0001893;1.76e-12;34!UBERON:0003528;1.77e-12;34!UBERON:0002791;1.77e-12;32!UBERON:0002020;1.77e-12;34!UBERON:0001869;1.77e-12;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,2.74e-50,2;UBERON:0001954,4.52e-50,2;UBERON:0003022,4.52e-50,2;UBERON:0002421,4.52e-50,2;UBERON:0002600,4.52e-50,2;UBERON:0000349,5.15e-21,5;UBERON:0002619,2.02e-18,22;UBERON:0000200,7.67e-18,6;UBERON:0000956,1.86e-16,25;UBERON:0000203,1.86e-16,25;UBERON:0001871,1.65e-15,6;UBERON:0002791,2.96e-13,32;UBERON:0001869,2.96e-13,32;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0001893,1.42e-12,34;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05065662254908,0.1251909307065,0,0,0,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0.615349092722265,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.785577949580009,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05065662254908,0.1251909307065,0,0,0,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0.615349092722265,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.785577949580009,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@LPPR4 | |short_description=p13@LPPR4 | ||
}} | }} |
Latest revision as of 02:03, 20 September 2015
Short description: | p13@LPPR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LPPR4_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -141bp_to_BC041386_5end |
EntrezGene: | LPPR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 2.74e-50 | 2 |
Ammon's horn | 4.52e-50 | 2 |
lobe parts of cerebral cortex | 4.52e-50 | 2 |
hippocampal formation | 4.52e-50 | 2 |
limbic lobe | 4.52e-50 | 2 |
limbic system | 5.15e-21 | 5 |
regional part of cerebral cortex | 2.02e-18 | 22 |
gyrus | 7.67e-18 | 6 |
cerebral cortex | 1.86e-16 | 25 |
pallium | 1.86e-16 | 25 |
temporal lobe | 1.65e-15 | 6 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |