FFCP PHASE1:Hg19::chr10:96046794..96046821,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100128054 | |EntrezGene=100128054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_NR_033969,uc001kjo.1_5end | |association_with_transcript=5bp_to_NR_033969,uc001kjo.1_5end | ||
|cluster_id=chr10:96046794..96046821,- | |||
|coexpression_cluster_id=C1602 | |||
|description=CAGE_peak_1_at_LOC100128054_5end | |description=CAGE_peak_1_at_LOC100128054_5end | ||
|id=chr10:96046794..96046821,- | |id=chr10:96046794..96046821,- | ||
|ontology_enrichment_celltype=CL:0000055!5.85e-13!180;CL:0000057!3.60e-11!75;CL:0000327!2.36e-07!14 | |ontology_enrichment_celltype=CL:0000055!5.85e-13!180;CL:0000057!3.60e-11!75;CL:0000327!2.36e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.40e-10;12!CL:0002590;2.43e-09;3!CL:0002580;2.74e-09;3!CL:0002615;2.78e-09;3!CL:0002579;6.88e-09;3!CL:0002586;1.78e-08;3!CL:0000708;3.90e-08;3!CL:0000136;2.51e-07;13!CL:0000327;4.09e-07;15!CL:0000349;4.14e-07;19!CL:0002617;5.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.95e-10,12;CL:0002590,2.40e-09,3;CL:0002580,2.67e-09,3;CL:0002615,3.14e-09,3;CL:0002579,5.97e-09,3;CL:0002586,1.78e-08,3;CL:0000708,5.82e-08,3;CL:0000349,3.44e-07,19;CL:0000327,4.62e-07,15;CL:0002617,5.18e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!3.05e-09!12;UBERON:0000042!3.05e-09!12;UBERON:0003688!3.34e-09!6;UBERON:0002358!3.34e-09!6;UBERON:0003684!3.34e-09!6;UBERON:0001178!3.34e-09!6;UBERON:0004923!8.22e-08!57 | |ontology_enrichment_uberon=UBERON:0004457!3.05e-09!12;UBERON:0000042!3.05e-09!12;UBERON:0003688!3.34e-09!6;UBERON:0002358!3.34e-09!6;UBERON:0003684!3.34e-09!6;UBERON:0001178!3.34e-09!6;UBERON:0004923!8.22e-08!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.80e-16;6!UBERON:0002358;1.80e-16;6!UBERON:0003684;1.80e-16;6!UBERON:0001178;1.80e-16;6!UBERON:0004457;5.16e-14;9!UBERON:0000042;5.16e-14;9!UBERON:0000966;1.23e-08;5!UBERON:0005388;1.23e-08;5!UBERON:0001802;1.23e-08;5!UBERON:0001781;1.78e-08;3!UBERON:0001782;1.78e-08;3!UBERON:0003210;3.90e-08;3!UBERON:0000310;4.81e-07;10!UBERON:0000478;6.92e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.76e-16,6;UBERON:0002358,1.76e-16,6;UBERON:0003684,1.76e-16,6;UBERON:0001178,1.76e-16,6;UBERON:0004457,3.05e-10,12;UBERON:0000042,3.05e-10,12;UBERON:0001782,1.78e-08,3;UBERON:0005424,1.78e-08,3;UBERON:0004923,3.62e-08,66;UBERON:0003210,5.82e-08,3;UBERON:0000966,3.22e-07,6;UBERON:0005388,3.22e-07,6;UBERON:0001802,3.22e-07,6;UBERON:0000310,4.73e-07,10;UBERON:0000478,5.89e-07,24 | |||
|phase1_expression=23.6181893051724,25.477962343027,15.5049844505568,23.01685862122,3.12872766099101,3.48935409640147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612002073732759,0.313454721478088,0.85870796139317,0,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.98663991189768,0.722878304769133,3.00802746381534,2.462390822334,0,1.45990461090791,0,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58416759169329,3.5576626268671,2.67776490211736,0.805658634218294,0.760272105718513,2.4406205754817,0,0,1.16089646769304,0,0.112611480483322,0,0,0,0,0,0,1.98788780678127,2.27934920996244,0,0.286836620748814,0,4.48542080113846,0,0.74000264525148,0,0.404132016209064,0,0.908144565869588,0,0,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0,2.37600571456411,0.494533858557114,0,0,0,0,0,0.438977620880838,4.59731693698529,1.05166641234618,0.680593098960126,0,0.640672166455702,0.211931901159562,0.300091096084402,0.206105058476878,0.515281080091258,1.67505170698431,0,0.389748020644795,0.252433774244115,0.276149695926898,0.646584227275248,0,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17931135228781,2.16563844500876,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0.115930404975077,3.99189560401794,0.866198686566443,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13110241973656,0,0.571652865261156,2.24262168690721,2.1798003441664,2.12681028880755,2.97324946242889,0,0,0,0,0.257207374262142,0,0,0,0,0,0,1.06617584622764,0,0,0,0.199945982364114,0,0,0,4.79249710983165,2.29723871668228,0,3.61953266668948,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,1.66376689224646,0.892144943985809,1.57702415033935,0.117141414992713,1.20378439891088,0,1.03473071292505,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,8.93188108147597,8.5938705041315,8.41980283299221,4.22859192543813,22.0034117098682,2.73451665944133,2.96836132889982,0,0,0,0,0,0.241718899183244,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0,0.647747748306418,3.08454505380579,0.270946437543853,0,0,0,0,0,0,3.59030175162945,3.60816110269676,2.27764876265012,3.709476419318,0,0,0,0,0,0,0,0,0.551346289938122,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,10.7925927114304,13.9206946876239,5.71890581771475,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0.286822704408103,1.47373561519682,0,0,1.47775344708365,0.329294892959902,0,1.04980416073495,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.43246690842614,8.01804638248124,1.84296421259539,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,15.5591786202492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.638002319463839,1.55715908783166,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,1.36484205787483,0.285465333544967,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.915360273587694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0004164699473,0,0.336749488765919,8.83294287600557,0,2.57329909649911,1.04397716786085,0.226705925512272,0,0,0,5.5584260488975,0.219284049578707,0,0,0,0,32.1250217810015,2.12701969324168,0,0,0,0,0.327609848846413,0,0,0,0,0,1.13503190713367,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.636008701306837,0,0,9.87492642333915,0.6124909547064,0.128458450192919,0,0,0,0,0,0.484426936895553,0,0,0,0,0,1.52552838186867,0,0,0,0,0,0,11.3002623081967,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,7.71710620414958,0,0,0,0,0,0,0,0,0,0,0,0,3.78825684136279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=23.6181893051724,25.477962343027,15.5049844505568,23.01685862122,3.12872766099101,3.48935409640147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612002073732759,0.313454721478088,0.85870796139317,0,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.98663991189768,0.722878304769133,3.00802746381534,2.462390822334,0,1.45990461090791,0,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58416759169329,3.5576626268671,2.67776490211736,0.805658634218294,0.760272105718513,2.4406205754817,0,0,1.16089646769304,0,0.112611480483322,0,0,0,0,0,0,1.98788780678127,2.27934920996244,0,0.286836620748814,0,4.48542080113846,0,0.74000264525148,0,0.404132016209064,0,0.908144565869588,0,0,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0,2.37600571456411,0.494533858557114,0,0,0,0,0,0.438977620880838,4.59731693698529,1.05166641234618,0.680593098960126,0,0.640672166455702,0.211931901159562,0.300091096084402,0.206105058476878,0.515281080091258,1.67505170698431,0,0.389748020644795,0.252433774244115,0.276149695926898,0.646584227275248,0,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17931135228781,2.16563844500876,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0.115930404975077,3.99189560401794,0.866198686566443,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13110241973656,0,0.571652865261156,2.24262168690721,2.1798003441664,2.12681028880755,2.97324946242889,0,0,0,0,0.257207374262142,0,0,0,0,0,0,1.06617584622764,0,0,0,0.199945982364114,0,0,0,4.79249710983165,2.29723871668228,0,3.61953266668948,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,1.66376689224646,0.892144943985809,1.57702415033935,0.117141414992713,1.20378439891088,0,1.03473071292505,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,8.93188108147597,8.5938705041315,8.41980283299221,4.22859192543813,22.0034117098682,2.73451665944133,2.96836132889982,0,0,0,0,0,0.241718899183244,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0,0.647747748306418,3.08454505380579,0.270946437543853,0,0,0,0,0,0,3.59030175162945,3.60816110269676,2.27764876265012,3.709476419318,0,0,0,0,0,0,0,0,0.551346289938122,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,10.7925927114304,13.9206946876239,5.71890581771475,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0.286822704408103,1.47373561519682,0,0,1.47775344708365,0.329294892959902,0,1.04980416073495,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.43246690842614,8.01804638248124,1.84296421259539,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,15.5591786202492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.638002319463839,1.55715908783166,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,1.36484205787483,0.285465333544967,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.915360273587694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0004164699473,0,0.336749488765919,8.83294287600557,0,2.57329909649911,1.04397716786085,0.226705925512272,0,0,0,5.5584260488975,0.219284049578707,0,0,0,0,32.1250217810015,2.12701969324168,0,0,0,0,0.327609848846413,0,0,0,0,0,1.13503190713367,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.636008701306837,0,0,9.87492642333915,0.6124909547064,0.128458450192919,0,0,0,0,0,0.484426936895553,0,0,0,0,0,1.52552838186867,0,0,0,0,0,0,11.3002623081967,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,7.71710620414958,0,0,0,0,0,0,0,0,0,0,0,0,3.78825684136279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p1@LOC100128054 | |short_description=p1@LOC100128054 | ||
}} | }} |
Latest revision as of 02:12, 20 September 2015
Short description: | p1@LOC100128054 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100128054_5end |
Coexpression cluster: | C1602_mesothelioma_Adipocyte_Preadipocyte_bone_Smooth_papillary_Cardiac |
Association with transcript: | 5bp_to_NR_033969, uc001kjo.1_5end |
EntrezGene: | LOC100128054 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.95e-10 | 12 |
smooth muscle cell of the brain vasculature | 2.40e-09 | 3 |
preadipocyte of the breast | 2.67e-09 | 3 |
adipocyte of omentum tissue | 3.14e-09 | 3 |
omentum preadipocyte | 5.97e-09 | 3 |
retinal pigment epithelial cell | 1.78e-08 | 3 |
leptomeningeal cell | 5.82e-08 | 3 |
extraembryonic cell | 3.44e-07 | 19 |
extracellular matrix secreting cell | 4.62e-07 | 15 |
adipocyte of breast | 5.18e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.76e-16 | 6 |
peritoneum | 1.76e-16 | 6 |
abdominal cavity | 1.76e-16 | 6 |
visceral peritoneum | 1.76e-16 | 6 |
cavity lining | 3.05e-10 | 12 |
serous membrane | 3.05e-10 | 12 |
pigmented layer of retina | 1.78e-08 | 3 |
presumptive retinal pigmented epithelium | 1.78e-08 | 3 |
organ component layer | 3.62e-08 | 66 |
blood-cerebrospinal fluid barrier | 5.82e-08 | 3 |
retina | 3.22e-07 | 6 |
photoreceptor array | 3.22e-07 | 6 |
posterior segment of eyeball | 3.22e-07 | 6 |
breast | 4.73e-07 | 10 |
extraembryonic structure | 5.89e-07 | 24 |