FFCP PHASE1:Hg19::chr4:10118034..10118074,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:10118034..10118074,- to FFCP PHASE1:Hg19::chr4:10118034..10118074,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9948 | |EntrezGene=9948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12754 | |HGNC=12754 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000514319_5end | |||
|cluster_id=chr4:10118034..10118074,- | |||
|coexpression_cluster_id=C2766 | |||
|description=CAGE_peak_6_at_WDR1_5end | |||
|id=chr4:10118034..10118074,- | |||
|ontology_enrichment_celltype=CL:0000055!3.85e-42!180;CL:0000222!2.07e-35!119;CL:0002371!1.40e-21!591;CL:0000680!1.90e-21!57;CL:0000056!1.90e-21!57;CL:0000355!1.90e-21!57;CL:0000144!3.90e-21!625;CL:0000057!4.02e-21!75;CL:0000183!4.18e-21!59;CL:0000192!5.68e-21!42;CL:0000514!5.68e-21!42;CL:0000187!1.79e-20!54;CL:0000220!6.95e-20!246;CL:0002321!1.89e-19!248;CL:0000359!2.00e-19!32;CL:0000393!8.71e-18!60;CL:0000211!8.71e-18!60;CL:0000548!1.05e-16!679;CL:0000004!1.05e-16!679;CL:0000255!1.05e-16!679;CL:0000012!6.64e-16!682;CL:0000213!5.91e-13!57;CL:0000215!5.91e-13!57;CL:0000048!6.09e-13!430;CL:0000723!2.67e-12!436;CL:0000034!5.81e-11!444;CL:0002078!6.91e-11!44;CL:0000003!1.85e-10!722;CL:0000115!2.99e-10!35;CL:0002139!5.47e-10!24;CL:0000071!6.38e-09!18;CL:0002546!6.38e-09!18;CL:0002539!3.98e-07!10;CL:0002494!5.10e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.13e-24;32!CL:0000192;2.34e-18;43!CL:0002139;2.87e-13;24!CL:0000187;9.85e-12;55!CL:0000071;1.35e-11;18!CL:0000115;1.56e-11;36!CL:0000213;2.46e-10;58!CL:0000215;2.46e-10;58!CL:0000057;4.32e-10;73!CL:0002494;2.04e-09;16!CL:0002539;2.83e-09;10!CL:0002078;9.62e-09;45!CL:0000393;4.94e-08;61!CL:0000211;4.94e-08;61!CL:1000413;2.59e-07;9!CL:0002334;3.90e-07;12!CL:0002320;9.17e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.39e-40,121;CL:0000359,4.31e-26,32;CL:0000192,9.74e-26,43;CL:0000514,9.74e-26,43;CL:0000057,1.61e-23,76;CL:0000680,8.54e-23,58;CL:0000056,8.54e-23,58;CL:0000355,8.54e-23,58;CL:0000187,1.78e-21,55;CL:0000393,1.25e-17,61;CL:0000211,1.25e-17,61;CL:0002321,2.59e-17,250;CL:0000048,2.83e-17,427;CL:0000213,5.49e-17,58;CL:0000215,5.49e-17,58;CL:0000723,2.77e-16,433;CL:0000034,5.07e-15,441;CL:0000115,1.53e-13,36;CL:0002139,4.01e-13,24;CL:0002078,8.60e-13,45;CL:0000071,1.16e-11,18;CL:0002546,1.16e-11,18;CL:0002494,1.78e-09,16;CL:0002539,3.32e-09,10;CL:1000413,2.21e-07,9;CL:0002334,2.35e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.34e-18;43!CL:0000355;1.27e-11;58!CL:0002546;1.35e-11;18!CL:0000222;5.13e-11;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.82e-31!79;UBERON:0007798!3.82e-31!79;UBERON:0000055!7.86e-28!69;UBERON:0001981!3.00e-26!60;UBERON:0007500!3.00e-26!60;UBERON:0004537!3.00e-26!60;UBERON:0006965!3.00e-26!60;UBERON:0004535!4.22e-26!110;UBERON:0001009!1.25e-25!113;UBERON:0004872!1.72e-25!84;UBERON:0001637!6.93e-24!42;UBERON:0003509!6.93e-24!42;UBERON:0004572!6.93e-24!42;UBERON:0000914!4.29e-22!83;UBERON:0002329!4.29e-22!83;UBERON:0003077!4.29e-22!83;UBERON:0003059!4.29e-22!83;UBERON:0007282!4.29e-22!83;UBERON:0009618!4.29e-22!83;UBERON:0007285!4.29e-22!83;UBERON:0003914!6.35e-21!118;UBERON:0004290!2.25e-20!70;UBERON:0004573!1.46e-18!33;UBERON:0004571!1.46e-18!33;UBERON:0000486!1.74e-18!82;UBERON:0001134!2.01e-18!61;UBERON:0002036!2.01e-18!61;UBERON:0003082!2.01e-18!61;UBERON:0002385!3.54e-18!63;UBERON:0001015!3.54e-18!63;UBERON:0000383!3.54e-18!63;UBERON:0005256!5.15e-18!143;UBERON:0000490!2.00e-17!138;UBERON:0000926!1.17e-11!448;UBERON:0004120!1.17e-11!448;UBERON:0006603!1.17e-11!448;UBERON:0000947!1.63e-11!21;UBERON:0010191!1.63e-11!21;UBERON:0003081!3.57e-11!216;UBERON:0002100!3.06e-10!216;UBERON:0002204!6.31e-10!167;UBERON:0000467!3.81e-09!625;UBERON:0000480!4.03e-09!626;UBERON:0000468!4.43e-09!659;UBERON:0001986!6.38e-09!18;UBERON:0004638!6.38e-09!18;UBERON:0004852!6.38e-09!18;UBERON:0000119!1.25e-08!312;UBERON:0000487!3.04e-08!22;UBERON:0000483!3.11e-08!309;UBERON:0006914!7.13e-08!25;UBERON:0000477!9.18e-08!286;UBERON:0004237!3.98e-07!10;UBERON:0004695!3.98e-07!10;UBERON:0002111!3.98e-07!10;UBERON:0004178!3.98e-07!10;UBERON:0001135!7.79e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.04e-23;42!UBERON:0003509;4.04e-23;42!UBERON:0004572;4.04e-23;42!UBERON:0004573;1.48e-22;33!UBERON:0004571;1.48e-22;33!UBERON:0007500;1.20e-20;56!UBERON:0001981;1.20e-20;56!UBERON:0004537;1.20e-20;56!UBERON:0000055;4.99e-18;65!UBERON:0002049;4.25e-16;75!UBERON:0007798;4.25e-16;75!UBERON:0000947;3.14e-15;21!UBERON:0010191;3.14e-15;21!UBERON:0003914;1.23e-13;74!UBERON:0004638;1.35e-11;18!UBERON:0001986;1.35e-11;18!UBERON:0004852;1.35e-11;18!UBERON:0000487;7.89e-10;22!UBERON:0006914;8.37e-10;25!UBERON:0004535;1.22e-09;109!UBERON:0004237;2.83e-09;10!UBERON:0004695;2.83e-09;10!UBERON:0002111;2.83e-09;10!UBERON:0004178;2.83e-09;10!UBERON:0001009;5.43e-09;112!UBERON:0001135;9.16e-08;15!UBERON:0003915;2.59e-07;9!UBERON:0004700;2.59e-07;9!UBERON:0001917;2.59e-07;9 | |||
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|phase1_expression=2.54349730978779,1.92690471501885,2.81908808191942,12.0087958023756,1.34088328328186,4.36169262050184,5.06599756336621,0.631719873426831,0.261185628199839,0.982935746006035,0.697801167972428,1.31064823278103,1.84636884759917,0.618831764800233,1.32558950291166,3.36162573225888,10.2458069764076,5.11217063271161,6.34312638427659,0.861847406537515,6.12002073732759,3.44800193625897,0.572471974262113,0.958120975510189,1.12988375635323,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0,0,0.32389366601898,0,0.436194716338694,0.377875943688809,0,1.39457422143411,0.411167888021826,0.309706370895104,0,0,0.47296445977717,1.37898272294647,1.29096936716765,0,0.376484679085209,0.545812300115692,0.449446968890169,1.53041946185451,0.962787081228281,0.639337125799041,0,0,0,2.03146467040009,1.70215567407342,1.86846674698672,0.502497330513487,1.0429658368404,0.434377689410233,0,0.368277635987565,0.632924774881769,0,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,3.83587685530591,3.61439152384566,4.01070328508712,1.73815822752988,0.795285947051099,1.94653948121054,0.945348171640679,1.55210578223795,2.28370442802128,0.0654895377488563,0.364295288292542,0.370784442784429,0.324547393654683,0,0.930705723632056,0,0,0,3.37896092523399,5.16140757063675,6.59566953054429,10.1755429546322,5.87299210693868,4.95212475492121,6.47884396264113,2.32575083252396,3.20189636418039,3.01248551488203,6.0424397566372,6.84244895146661,3.90499292077071,3.67663080345869,4.86085168729056,2.05389375053383,2.69435247151404,1.12611480483322,7.66583187329416,2.84779697870439,4.03043836646896,0,0,0,7.45457927542978,9.75054939817264,3.70745706277013,2.58152958673932,4.965357350777,10.6528744027038,5.33744978648525,6.66002380726332,2.48968828319813,5.38842688278752,8.50001896189985,1.66493170409425,0.576175924479999,0.468642863667593,1.87296046098192,1.1409436430889,1.79338416662161,0.469737994575059,0.323745888736263,0.702254033511242,2.04154171254893,1.35117749042945,0.826606249406124,10.6920257155385,13.5996811103206,2.73048408581408,6.46756327634615,1.0100166837244,0.750711119231785,2.77064115484183,13.1693286264251,10.1140972613676,8.26309323986282,4.53728732640084,2.69084453533293,2.77624605464138,2.33125091275518,2.10063767259082,2.98852334791473,1.8034837803194,4.46680455195816,3.37552664482532,5.74878330451072,2.77677151668526,2.39329736469978,2.58633690910099,2.4850671476163,10.075209822764,8.64759020783487,2.12586938479627,2.72746120590835,2.29443676311203,0,0.265059536642971,0,0.310983165046111,0,0,9.38697193978896,18.0107462694008,11.0507937081984,3.25057549622385,5.0531563716871,0.591534000199219,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0.196221465125346,1.15424147083917,2.21446636387394,7.01208869017229,7.4083322039652,4.41026134156626,0,0,0,0,0,0.686271241194102,0.878002283269004,0,0.100528972411631,0.370353780634118,0.651616610620649,7.27954349695705,0,0.231860809950154,4.10930429825376,1.15493158208859,1.38895653772983,1.52203321787679,0,0,0,0.468008530278475,0,0,2.35174979478403,2.55195175036296,0.626909658919938,0.581267877027924,1.53353071666084,4.43396914106349,0.528290604079356,0,0,0.25248486685276,0.063497894292169,1.14596527667483,3.51652341630141,0,0.411309970813294,0,0.571652865261156,3.25180144601546,0.43596006883328,2.71351657537515,4.00742318849111,0,0,3.98907174877306,7.28052058379563,0.771622122786426,4.25547396069835,3.19706614819319,1.57275793023962,0.542621605391443,1.64648067356154,0.65147236858747,0.355391948742546,0,3.61727252471503,1.74306691720059,6.99810938274399,0,0.502257091432126,0,10.0642439306465,2.29723871668228,5.70547620162874,5.21212704003285,1.64381058040307,3.04403637507822,0.112085143993527,0,0.215627574859517,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0.981531933753119,0,3.52644530809656,6.65506756898583,6.60187258549499,4.1002627908823,10.191303104366,12.3387900888365,2.27407504055985,1.03473071292505,7.3064815838898,7.00602840458472,3.82287903659565,0.391602314925481,0.686286847621712,0,0,0,0.606255142892519,0,0.30239029332968,1.98486246255021,3.6830873589135,5.89386198309454,3.45975702990393,8.69902323413396,11.2597744800525,2.96836132889982,3.23840356985577,1.42049380250502,3.28508624055237,1.55776328755086,5.34567740915813,0,0.802025881213139,0,6.08516575272416,2.73136752010076,3.8026080338233,0.451199612907412,0.15403067420883,0.784349769176855,1.46139224653261,0,4.54933536283586,3.06168669497728,1.94324324491925,1.54227252690289,3.52230368807009,2.00675909541941,0.764628819135115,0.831076008928724,2.68649705666614,0,0,0.256450125116389,0.328014645699706,0,0.618246069886334,0.457847324091717,0.660075999364704,0.574265537996172,0.650060246036521,11.2478750890912,0.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| ||
|short_description=p6@WDR1 | |||
}} | }} |
Latest revision as of 02:36, 20 September 2015
Short description: | p6@WDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WDR1_5end |
Coexpression cluster: | C2766_Smooth_Hair_spindle_leiomyoma_Endothelial_bone_Multipotent |
Association with transcript: | 11bp_to_ENST00000514319_5end |
EntrezGene: | WDR1 |
HGNC: | 12754 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.39e-40 | 121 |
vascular associated smooth muscle cell | 4.31e-26 | 32 |
smooth muscle cell | 9.74e-26 | 43 |
smooth muscle myoblast | 9.74e-26 | 43 |
fibroblast | 1.61e-23 | 76 |
muscle precursor cell | 8.54e-23 | 58 |
myoblast | 8.54e-23 | 58 |
multi-potent skeletal muscle stem cell | 8.54e-23 | 58 |
muscle cell | 1.78e-21 | 55 |
electrically responsive cell | 1.25e-17 | 61 |
electrically active cell | 1.25e-17 | 61 |
embryonic cell | 2.59e-17 | 250 |
multi fate stem cell | 2.83e-17 | 427 |
lining cell | 5.49e-17 | 58 |
barrier cell | 5.49e-17 | 58 |
somatic stem cell | 2.77e-16 | 433 |
stem cell | 5.07e-15 | 441 |
endothelial cell | 1.53e-13 | 36 |
endothelial cell of vascular tree | 4.01e-13 | 24 |
meso-epithelial cell | 8.60e-13 | 45 |
blood vessel endothelial cell | 1.16e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.16e-11 | 18 |
cardiocyte | 1.78e-09 | 16 |
aortic smooth muscle cell | 3.32e-09 | 10 |
endothelial cell of artery | 2.21e-07 | 9 |
preadipocyte | 2.35e-07 | 12 |