FFCP PHASE1:Hg19::chr18:60190619..60190652,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54877 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22916 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C0B9,Q9BRD4 | |||
|association_with_transcript=-5bp_to_ENST00000269499,NM_017742,uc002lio.2,uc002lip.3_5end | |||
|cluster_id=chr18:60190619..60190652,+ | |||
|description=CAGE_peak_2_at_ZCCHC2_5end | |||
|id=chr18:60190619..60190652,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.01e-19!140;CL:0002031!2.80e-15!124;CL:0002087!6.92e-15!119;CL:0000037!1.18e-14!172;CL:0000566!1.18e-14!172;CL:0000988!3.65e-14!182;CL:0002032!1.66e-13!165;CL:0000837!1.66e-13!165;CL:0000542!3.46e-09!53;CL:0000051!3.46e-09!53;CL:0000766!3.95e-09!76;CL:0000838!6.89e-09!52;CL:0000839!5.94e-07!70;CL:0000557!7.09e-07!71;CL:0000791!8.81e-07!18;CL:0000789!8.81e-07!18;CL:0002420!8.81e-07!18;CL:0002419!8.81e-07!18;CL:0000790!8.81e-07!18 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.47e-20,136;CL:0002031,1.83e-15,120;CL:0002087,4.97e-15,115;CL:0000037,8.49e-15,168;CL:0000988,1.01e-14,177;CL:0002032,1.71e-13,161;CL:0000837,1.71e-13,161;CL:0000542,2.03e-10,53;CL:0000051,2.03e-10,53;CL:0000838,4.52e-10,52;CL:0000766,1.40e-08,72;CL:0000791,2.77e-07,18;CL:0000789,2.77e-07,18;CL:0002420,2.77e-07,18;CL:0002419,2.77e-07,18;CL:0000790,2.77e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-17!115;UBERON:0002390!2.40e-10!102;UBERON:0003061!2.40e-10!102;UBERON:0002193!3.70e-10!112;UBERON:0000178!2.23e-07!15;UBERON:0000179!2.23e-07!15;UBERON:0000463!2.23e-07!15;UBERON:0002405!5.15e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.94e-08;15!UBERON:0000179;2.94e-08;15!UBERON:0000463;2.94e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-17,114;UBERON:0002193,6.48e-11,108;UBERON:0002390,8.29e-11,98;UBERON:0003061,8.29e-11,98;UBERON:0000178,2.40e-08,15;UBERON:0000179,2.40e-08,15;UBERON:0000463,2.40e-08,15 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,1.0007329835313,0.446961094427288,0,0,0,1.30592814099919,0.245733936501509,1.39560233594486,0.873765488520689,0.263766978228454,0.866364470720326,0.662794751455832,1.34465029290355,0.602694528023977,0,0,0,0.204000691244253,0,0.572471974262113,0.821246550437305,0.251085279189606,1.22261449196722,2.29881650459848,2.12519109546934,0.786728553697808,2.68680578668049,1.39334510984468,0,0.30120591877825,0.369754010166788,1.00707360754392,2.27470771979874,2.34880351467878,1.10799081706375,1.20326668482085,1.30206522429511,5.15005590751826,5.18229865630367,7.7272670290256,1.16318591023652,3.02300754951048,3.88134497900506,0.929716147622738,2.05583944010913,1.23882548358041,1.1507695692886,0.768482119587302,0.47296445977717,0.689491361473237,1.29096936716765,0,0.941211697713023,2.45615535052061,1.79778787556068,0.612167784741805,1.28371610830437,1.27867425159808,2.63881040149373,2.39356389145958,1.27867425159808,0.870627715885752,1.70215567407342,1.86846674698672,3.51748131359441,3.12889751052121,1.95469960234605,4.23779651843358,1.10483290796269,0.316462387440884,1.90129757680748,1.4882300997553,1.67726916406701,0.786300418025466,1.05123824989054,0.803627933485401,3.70516566863623,2.18808344918999,0.730656615058536,0,3.27683166757279,4.44754626931777,4.26730222566507,2.00197993518006,0,3.30522436392431,1.90810750907073,2.84606484554724,4.11066032559657,3.44045905312706,1.32171328579026,2.80254281490768,0,2.9506465517075,1.96505381374582,2.67281948699362,5.3499678525017,2.93330039970231,3.31413464014313,3.89653456815823,4.45641827540694,2.65145316727353,1.32920336750173,3.5204502289452,3.71464827204458,4.29195846947598,4.1109476150919,2.76350017785848,2.60822777161547,3.41059095272739,2.40786745280742,3.1360657141493,2.71942422474159,1.91610246800961,1.71813722741315,2.02415753615602,3.82278497188916,3.90650072313851,1.90090408889675,2.40920190524436,2.43174561193395,7.49584359314075,2.60454977248419,0.821127996921047,4.23374160771938,2.94184215361858,3.18613688542158,0,0,0.383587685530591,0.722878304769133,0,0.724232594804119,0,0,0.472674085820339,0.221729397462564,0.43917392846563,1.63723844372141,1.82147644146271,0.370784442784429,8.76277962867645,10.447784237956,6.1160661838678,0.953962497221368,1.14398982156026,0.371457501329565,1.19257444420023,2.58070378531837,2.08284300964557,2.26123176769604,2.93649605346934,1.92582629358047,0.835979866147242,4.65150166504792,1.42306505074684,2.67776490211736,0.402829317109147,0.760272105718513,1.95249646038536,1.83831540172934,0,4.37568668591991,2.46982309888787,2.47745257063309,1.53316637465883,0.949265659568129,1.83201743930407,14.495845917967,3.87780264148325,0.436094052142534,2.48485975847659,0.759783069987479,0.926864265692532,1.43418310374407,1.06400514659507,0,0,0.24666754841716,1.24484414159907,0.538842688278752,0.490385709340376,0.756787138224657,0,0.234321431833797,0.624320153660641,0.570471821544449,2.39117888882882,0.352303495931295,0.809364721840658,0.280901613404497,0.61246251376468,0.859840221182376,1.54988671763648,2.37600571456411,1.7308685049499,0,0,0.841680569770331,0.750711119231785,0.554128230968366,1.31693286264251,0.30648779579902,2.55404700141215,0.226864366320042,1.4351170855109,0.213557388818567,1.05965950579781,0.600182192168805,1.03052529238439,1.8034837803194,0.18611685633159,1.0126579934476,0.779496041289589,2.01947019395292,0.460249493211497,0.969876340912871,0.355009592516614,0.201504196455281,0.508681776931463,1.54608682530637,0.545492241181669,0.286804595389004,0.487894824518382,0.397589304964456,0.116193942869518,0.518305275076852,0,0.72995471815166,0,1.28648187638577,0,0,0.721879481669586,3.07597680103594,2.86593973132773,2.41011029883482,2.31617342738027,2.61455332910887,0.949082476444386,2.15730093056263,2.15843611637881,1.15424147083917,8.11971000087113,4.20725321410337,0.4115740113314,1.47008711385542,0,3.9313088667105,1.18157981336281,2.6487785964879,0.368965315629341,0.171567810298526,1.20725313949488,1.1240175325762,0.703702806881416,2.22212268380471,0.325808305310325,2.07986957055916,1.44331342025273,0.695582429850461,0.352226082707465,0.721832238805369,2.31492756288305,0.380508304469197,0.790204397959275,0.858486162094873,3.20082107913617,3.7440682422278,4.01304138179566,0,0.671928512795438,0.850650583454319,0.716468181622786,1.16253575405585,2.68367875415648,0,6.25143881493905,5.39053100406007,5.90891809009542,4.67097003677606,1.90493682876507,1.14596527667483,0,3.4214489204541,1.23392991243988,0.600686115687835,0.571652865261156,0.112131084345361,0.43596006883328,0.51336800074665,0.387815147273333,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,1.42977993658148,0,0.823240336780769,0.325736184293735,0,0,0.602878754119172,0,0.499864955910285,3.64871341923571,0,6.32501818449095,0.239624855491583,0,0,0.289562613335158,0.61642896765115,0.537182889719687,1.12085143993527,4.92576900504818,2.58753089831421,3.33691894327346,0.508189248444927,2.60279707715243,1.54657762555539,0.167516265334349,0,4.49404214368309,5.9832291840805,7.87389475528467,2.33113834266366,0,1.89885516589815,0.831883446123229,0.356857977594324,0.157702415033935,1.28855556491985,0.300946099727719,0,3.10419213877515,0.664225598535437,0.553107505625109,0.60818530127658,0.391602314925481,0.343143423810856,3.10152039184331,2.15714200818617,4.16237475433433,2.72814814301633,0,0.30239029332968,0.744323423456331,0.306923946576125,0.280660094433074,0.128139149255701,0.511707249066704,0.482561763430822,1.48418066444991,1.3878872442239,0.532685175939381,0.821271560138091,0,1.39452454151951,0.846016147141356,0.802025881213139,0.552485933615378,0.68888668898764,0,0.524497659837696,0,0.308061348417659,0.784349769176855,2.92278449306521,0.949964660035881,1.13733384070897,1.53084334748864,0.431831832204279,0,1.35473218771926,0,1.27438136522519,1.66215201785745,0,0.877039506583738,1.5686127061494,0.769350375349168,0.656029291399411,0.325378394664303,2.47298427954533,0.366277859273374,0.330037999682352,0.574265537996172,1.95018073810956,0,0.773365746336976,1.23238893691716,0.614014698904518,0.827019434907183,0.644521469209642,0.870100163485371,0.93749290157711,0.890320356467374,0.826424576804891,2.49847087574638,3.06270509987002,2.12431339796655,0.929691098594572,0,0.6970372701606,3.08033580176089,1.59691809095107,0,0,0.429374660225974,0,0,0.190630193923825,0.255897791311334,1.71175595213568,0.95460974377781,0,0.359744915166629,0.54907405947211,0.471249609382746,0.808729926293264,1.58510321173008,0.421258456238981,0.975267478179181,1.46228093778771,0,0.409499734223957,0.565621727814851,0,0,0.66343897524122,1.75380354101505,0,0,0.608731130888112,0.92947049429925,0,0.573645408816206,0.491245205065606,1.07001315444375,0.354761064070598,1.26664581178598,1.64647446479951,0.75894634753143,0.699869440489966,0.865999014529609,0,0,1.7887322147588,0,3.36942951335251,0,0.918893600827838,1.52234282769651,1.52927441428475,2.84823593587081,3.09701308095126,2.46817363851717,3.8908398671563,1.62009431171434,4.75875105776562,1.70918513803957,1.92495971052672,0.735120647943095,2.60124445176006,1.44269212976445,0.924843963529383,1.4348364545594,0,1.1490322207942,0.846694330895531,0.973865820823666,0.842391534340376,3.65175486453108,1.41011906195721,2.50634477090067,1.18504244461122,0.1605880751037,0.80719882876419,0.425846237690326,2.40453741329035,0.921722292925374,1.56573275524691,1.16794399198336,0.976940477010201,2.78406173895242,0,0.540911356951966,0.33307196799782,0,1.68426486367398,4.9812780952444,1.21360521749513,0.780103689942349,0.568272293612826,1.90995587790152,1.48482340416319,1.53580351049616,0,2.67271891179974,3.67318726575589,0.659215496907038,2.74463030566391,5.57894367102995,4.14425873296722,0.503865495708552,1.1249555075237,1.23084805461069,0.311039587661807,0.359473404589307,0,0.511572370226872,2.56472854656027,7.18449277040819,0,2.90799823828566,1.85536196323703,0,1.04171104434093,2.36141999989728,5.79999660347835,0.568967241427498,0,0.472775363535873,0,0.291604613383254,1.04174996959975,0.885741385813839,2.41192877250816,3.05163472634166,0.995213339381022,0.886642856860642,1.75508317723178,0.10893846351899,0.975966209950223,2.77020930613669,0.797594390929008,0.922255617552241,0.807818799687949,0.108647371922008,1.27600463892768,0.915975934018623,1.5991043280559,1.02193298195737,0.627921025580099,0.332423363800313,0,1.17637520590644,0.839107934879214,1.51802986179348,0,1.05499032264014,0.489698424477443,0.706765357169704,0.216388639742091,1.99052386215701,3.09601475761687,2.4441205797345,10.3782395038218,6.54888876416465,5.53436332378913,1.68502832451693,1.60515529459758,0.468528891450678,0.547364367646998,0.19566461893209,0.485560759068186,3.15667522279512,1.20990716048664,1.53036380815245,1.32691817219825,1.35291077473043,2.07376382794494,0.664653872707185,0.330991955875499,0,0,0,0.554698692052555,0.347119476670262,0.979923974143776,0.522355239482415,2.79562669187248,1.37588825977293,2.03188295707079,1.31560770755134,1.39596276990456,1.74580229679155,4.94234309472401,2.03382666702479,0.274083849293502,0.596143835108969,2.34249945036751,0.782205530939212,2.48492342779755,2.77488893161158,0.799238438328521,1.72908500584927,1.83258553865465,0.686379991447858,0,1.36677789121976,0.471388069233591,0.135904206073614,0.523014231561666,0.407992870545287,0.577901179803038,1.20084057741958,2.19048606227189,0,0,1.8402114799552,2.79282401272254,2.29160424011684,5.0251111720377,1.99679000498991,1.28767814440971,0.89268582976749,3.09043973438941,0.720599767084807,1.16495949527454,5.43603957919843,4.03837706067716,6.06631894687664,0.0984274815147488,0.0846733320657845,0.795229689809303,1.36203406111576,0,0.825236619583403,0,1.5748172408605,3.0952078182318,2.24773359634691,1.0063040627978,1.10327990218877,1.67854682031994,0.422401346077626,0.896436696664224,0.767660789277781,0.714695326373367,0,1.27134268827375,0.542999601753713,0,1.95952416065645,0,0.164185041498678,0.681552087141687,0.339936274560377,1.17241786942466,5.30027555648885,2.19781025814636,1.98348902614035,0.513260513652988,0.704815022316672,2.24253566392159,4.24451623769098,3.72815149812476,1.9846640872478,0,5.11528913199763,0.638341257770182,2.72008901684737,0,1.22538230705385,0.983617892129413,0.628216385000937,2.65820453990096,2.19647276823534,2.253436752717,0.573409195690071,1.88579387612649,1.4903136705932,1.38348634936231,1.24980407962107,0.454947352624943,2.28372266835974,0.941063278792687,0.468334905806882,0.144921028610825,0.298509605773748,0.934853239388898,0,0.568209015825267,1.50940741051545,0.889811221596536,0,1.81477108515887,0.466311601748341,0.147855149989634,0.159296767163702,0,0.465788870628778,0.829412415681711,0.53168342911599,1.5652351854352,0.601030435988874,0.761610424337591,0,0.181848659202559,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0,0,0.963099152036517,0,1.30497145982606,0.906823702049089,0.231522474323834,0.489473409012935,0,0.308801447160972,0.657852148736121,1.06013487567529,0.578742114812744,0.844712203265363,0.512483037175893,0.345430341731199,0,2.48865185073115,1.7537427795545,2.12583744501381,1.79921933681429,0.982829546539238,0.983091635014877,0.211312123358627,6.59958406321269,1.38699248602383,0,0,2.76158925377761,0.419638523158333,1.24415452006595,0.895260599125562,0,0.157265941855896,0.54604819096007,0.33946505990805,0.212574920101683,0.123935764259002,0,0.318004350653419,1.81382013502883,0.80057074828547,0.705351887381368,0.3062454773532,1.73418907760441,2.8339315265117,1.75597244962866,1.02558182120378,0.756215088665154,1.65977405914123,2.74508597574147,0,0.490738592505128,0.471878893390961,0.550285795565037,1.84841065840541,0,0,0.397832444232549,2.18109952212846,0.40341013740704,0.781514011233092,0.523813388962845,0.982631505060581,0.295712172434091,2.09366512317023,1.56215619722769,2.06686796501184,1.8390584956233,1.64092442705466,2.19303106742873,2.97726707033577,0.175871244359621,0.638812138197976,1.60710550763486,1.3451348888753,2.42786241694653,1.82129753081038,1.33053555243958,2.07421177600403,0.685952037749674,1.22345519358297,1.51277379194553,0.945550727071746,0.889851215136553,2.66876515691748,1.09980912941201,0.840816489941367,0,1.94334832096759,2.8665101273223,1.6439605160631,0.632054446930906,0.929931402945002,0,0,3.31545862660859,3.0729325876911,3.45629830907046,3.44181887056222,1.18332000730565,0.937347452350735,2.54032230114557,0.4582137370881,0.62041277132864,0.955538938977433,1.23040974977572,0.785201868921944,1.46301509978723,0.647428837187895,3.4905354331124,1.1598144313382,0.485710993059139,1.40363678077263,0.994753875806841,0.83244063544298,0,0,2.41540549706678,1.23478652972711,2.40415516554353,0.470317296361523,2.94177986104687,0.707029641304878,1.37415926980462,1.48523200163543,1.6906229103336,0.509781344063451,2.16163011353663,2.90060495881097,1.39917618294901,0,0.352894871715692,0.802413666891683,1.46067277649303,1.83491713361816,3.87016874508919,0.315543124386369,1.29183831362738,0.872701380680755,2.645134202577,1.11598505450025,0.462175628631418,0.865253124247578,0,0,0.126698501011437,0.203977659483963,0,0.275684698604535,0.250707539292375,1.28823786971007,0.803892390468535,0.829169439458779,2.48239190068549,1.0661699095049,0.476128862927481,2.51896748360424,2.42091385753846,0.784923038064294,1.52753179867596,1.41482032270754,1.74173398317569,1.02669990325584,1.75115337837928,1.93649954560226,0.665320713092027,0.0814032686109745,0.960546112899439,0,1.3473780315988,2.34640942403454,3.66724332548599,1.62758471326295,5.99181096766961,4.02547587182052,1.60284246151616 | |||
|short_description=p2@ZCCHC2 | |||
}} |
Latest revision as of 02:45, 20 September 2015
Short description: | p2@ZCCHC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZCCHC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000269499, NM_017742, uc002lio.2, uc002lip.3_5end |
EntrezGene: | ZCCHC2 |
HGNC: | 22916 |
UniProt: | Q9C0B9Q9BRD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.47e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 1.83e-15 | 120 |
nongranular leukocyte | 4.97e-15 | 115 |
hematopoietic stem cell | 8.49e-15 | 168 |
hematopoietic cell | 1.01e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.71e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-13 | 161 |
lymphocyte | 2.03e-10 | 53 |
common lymphoid progenitor | 2.03e-10 | 53 |
lymphoid lineage restricted progenitor cell | 4.52e-10 | 52 |
myeloid leukocyte | 1.40e-08 | 72 |
mature alpha-beta T cell | 2.77e-07 | 18 |
alpha-beta T cell | 2.77e-07 | 18 |
immature T cell | 2.77e-07 | 18 |
mature T cell | 2.77e-07 | 18 |
immature alpha-beta T cell | 2.77e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-17 | 114 |
hemolymphoid system | 6.48e-11 | 108 |
hematopoietic system | 8.29e-11 | 98 |
blood island | 8.29e-11 | 98 |
blood | 2.40e-08 | 15 |
haemolymphatic fluid | 2.40e-08 | 15 |
organism substance | 2.40e-08 | 15 |