FFCP PHASE1:Hg19::chr11:73020580..73020591,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:73020580..73020591,+
|short_description=p12@ARHGEF17
|description=CAGE_peak_12_at_ARHGEF17_5end
|association_with_transcript=-296bp_to_AB002335_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9828 | |EntrezGene=9828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21726 | |HGNC=21726 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PE2 | |UniProt=Q96PE2 | ||
|association_with_transcript=-296bp_to_AB002335_5end | |||
|cluster_id=chr11:73020580..73020591,+ | |||
|description=CAGE_peak_12_at_ARHGEF17_5end | |||
|id=chr11:73020580..73020591,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.34e-12!180;CL:0000057!1.27e-10!75;CL:0000222!8.35e-08!119;CL:0000183!1.45e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002195;6.51e-19;2!CL:0002571;6.51e-19;2!CL:0000511;7.39e-11;1!CL:0002625;7.39e-11;1!CL:0000216;7.39e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,1.48e-18,2;CL:0002571,1.48e-18,2;CL:0000511,8.14e-11,1;CL:0002625,8.14e-11,1;CL:0000216,8.14e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.50e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;2.50e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.01e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.76e-10!143;UBERON:0002049!4.50e-10!79;UBERON:0007798!4.50e-10!79;UBERON:0000490!4.66e-09!138;UBERON:0000475!6.06e-09!365;UBERON:0000468!9.72e-08!659;UBERON:0000914!1.05e-07!83;UBERON:0002329!1.05e-07!83;UBERON:0003077!1.05e-07!83;UBERON:0003059!1.05e-07!83;UBERON:0007282!1.05e-07!83;UBERON:0009618!1.05e-07!83;UBERON:0007285!1.05e-07!83;UBERON:0000467!1.10e-07!625;UBERON:0000480!1.36e-07!626;UBERON:0002100!1.58e-07!216;UBERON:0001009!1.71e-07!113;UBERON:0003914!3.19e-07!118;UBERON:0002385!3.54e-07!63;UBERON:0001015!3.54e-07!63;UBERON:0000383!3.54e-07!63;UBERON:0004535!5.65e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;7.39e-11;1!UBERON:0001343;7.39e-11;1!UBERON:0004910;7.39e-11;1!UBERON:0004813;7.39e-11;1!UBERON:0000941;2.50e-10;1!UBERON:0001785;2.50e-10;1!UBERON:0002464;2.50e-10;1!UBERON:0004904;2.50e-10;1!UBERON:0001021;2.50e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,8.14e-11,1;UBERON:0001343,8.14e-11,1;UBERON:0004910,8.14e-11,1;UBERON:0005154,8.14e-11,1;UBERON:0005295,8.14e-11,1;UBERON:0004813,8.14e-11,1;UBERON:0005297,8.14e-11,1;UBERON:0005294,8.14e-11,1;UBERON:0010141,8.14e-11,1;UBERON:0005891,8.14e-11,1;UBERON:0000941,2.50e-10,1;UBERON:0001785,2.50e-10,1;UBERON:0002464,2.50e-10,1;UBERON:0004904,2.50e-10,1;UBERON:0001021,2.50e-10,1;UBERON:0003902,2.50e-10,1;UBERON:0005425,2.50e-10,1 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.61560529038394,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.144846518960824,0.795285947051099,0,0,0.443458794925128,0.263504357079378,0,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0.775250277507987,0.71153252537342,0,0,2.28081631715554,0.24406205754817,0,0,0.446498641420399,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0.311211035399766,0.404132016209064,0,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0,0.280901613404497,0.408308342509787,0,0,0,0,0.910161361938026,2.15585442544872,0,0,0,0.877955241761676,0.612975591598039,0.600952235626387,0.226864366320042,1.07633781413317,0.427114777637135,0.211931901159562,0.900273288253207,0.309157587715317,1.54584324027377,0.558350568994769,0.506328996723799,0,1.00973509697646,0.184099797284599,0.161646056818812,0.710019185033229,0.806016785821122,0.169560592310488,0.57978255948989,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,2.94017422771084,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.352226082707465,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.07333828582095,0.258543431515556,3.57656445851882,0.845302752556,1.32969058292435,0,0.771622122786426,0,0.799266537048298,1.14382394926518,0,0,0,1.06617584622764,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0.157702415033935,0.585707074963566,0,0,0,0,0.184369168541703,0.434418072340414,1.76221041716467,0.686286847621712,0,0,0,0,1.66435439510497,0.604780586659361,0,1.07423381301644,0.841980283299221,0.128139149255701,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0.0770153371044148,0.784349769176855,0,0.316654886678627,3.4120015221269,0.510281115829547,0,0,0.541892875087706,0,0.509752546090077,0,0.671624264166535,0,0,0,0.328014645699706,0,0.309123034943167,0.0915694648183434,0.165018999841176,0.574265537996172,0,3.21367859688319,0,0.154048617114644,0.15350367472613,0,0.322260734604821,0,0.170453254832202,0.445160178233687,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0.62962469366128,0,0,1.59691809095107,0,0.55597265731176,0,1.86079184679834,0.632758849437452,0.571890581771475,0.767693373934002,0,0,0,0,0,0.589062011728432,0.404364963146632,1.58510321173008,0.421258456238981,0.975267478179181,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0.578775534266688,1.9676842561399,0.405820753925408,0,0,0,0.294747123039363,0.35667105148125,0.709522128141196,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.996239941255349,0.276283915531148,0,0,0,1.24415835064723,0.269605053441981,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.247127877893006,0,0.134802265961354,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.290967049465258,0,0,0.137041924646751,0,0.126621591911757,0.195551382734803,0.320635281006135,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.523014231561666,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0,0.429226048136571,0.446342914883745,0,0,0,0,0,0.13480708770837,0,0.0846733320657845,0,0,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.471612915298998,0,0.496166021811951,0,0,0,0,0.7520696820681,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0.414706207840855,0,2.08698024724694,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0.800055529326307,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0,0,0.463044948647668,0,0,0,0,0.353378291891762,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851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| ||
|short_description=p12@ARHGEF17 | |||
}} | }} |
Latest revision as of 02:53, 20 September 2015
Short description: | p12@ARHGEF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ARHGEF17_5end |
Coexpression cluster: | NA |
Association with transcript: | -296bp_to_AB002335_5end |
EntrezGene: | ARHGEF17 |
HGNC: | 21726 |
UniProt: | Q96PE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 1.48e-18 | 2 |
hepatic mesenchymal stem cell | 1.48e-18 | 2 |
androgen binding protein secreting cell | 8.14e-11 | 1 |
seminiferous tubule epithelial cell | 8.14e-11 | 1 |
Sertoli cell | 8.14e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 8.14e-11 | 1 |
seminiferous tubule of testis | 8.14e-11 | 1 |
epithelium of male gonad | 8.14e-11 | 1 |
epithelial cord | 8.14e-11 | 1 |
sex cord | 8.14e-11 | 1 |
seminiferous tubule epithelium | 8.14e-11 | 1 |
testis sex cord | 8.14e-11 | 1 |
genital ridge | 8.14e-11 | 1 |
primitive sex cord of indifferent gonad | 8.14e-11 | 1 |
coelomic epithelium | 8.14e-11 | 1 |
cranial nerve II | 2.50e-10 | 1 |
cranial nerve | 2.50e-10 | 1 |
nerve trunk | 2.50e-10 | 1 |
nerve connecting eye with brain | 2.50e-10 | 1 |
nerve | 2.50e-10 | 1 |
retinal neural layer | 2.50e-10 | 1 |
presumptive neural retina | 2.50e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.01e-10 | 1 |