FFCP PHASE1:Hg19::chrX:153665575..153665586,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2664 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4226 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=40bp_to_ENST00000481304_5end | |||
|cluster_id=chrX:153665575..153665586,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_GDI1_5end | |||
|id=chrX:153665575..153665586,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.24e-17!180;CL:0000359!1.26e-09!32;CL:0000192!6.79e-09!42;CL:0000514!6.79e-09!42;CL:0000183!8.65e-09!59;CL:0000680!3.60e-08!57;CL:0000056!3.60e-08!57;CL:0000355!3.60e-08!57;CL:0000393!9.02e-08!60;CL:0000211!9.02e-08!60;CL:0000187!1.61e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.68e-10;32!CL:0000192;9.39e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.96e-12,32;CL:0000192,3.72e-09,43;CL:0000514,3.72e-09,43;CL:0000680,1.73e-07,58;CL:0000056,1.73e-07,58;CL:0000355,1.73e-07,58;CL:0000393,3.86e-07,61;CL:0000211,3.86e-07,61;CL:0000187,9.65e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;9.39e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.66e-27!57;UBERON:0005068!6.66e-27!57;UBERON:0006241!6.66e-27!57;UBERON:0007135!6.66e-27!57;UBERON:0001017!2.81e-26!82;UBERON:0005743!4.07e-25!86;UBERON:0000955!9.31e-24!69;UBERON:0006238!9.31e-24!69;UBERON:0000073!1.69e-23!94;UBERON:0001016!1.69e-23!94;UBERON:0002616!4.40e-23!59;UBERON:0001893!1.49e-20!34;UBERON:0001869!2.93e-20!32;UBERON:0002020!3.20e-20!34;UBERON:0003528!3.20e-20!34;UBERON:0002791!7.27e-20!33;UBERON:0002780!7.53e-20!41;UBERON:0001890!7.53e-20!41;UBERON:0006240!7.53e-20!41;UBERON:0003080!1.81e-19!42;UBERON:0000025!1.11e-18!194;UBERON:0003075!2.50e-18!86;UBERON:0007284!2.50e-18!86;UBERON:0000956!2.57e-16!25;UBERON:0000203!2.57e-16!25;UBERON:0002346!7.79e-16!90;UBERON:0002619!1.74e-15!22;UBERON:0001950!3.12e-14!20;UBERON:0000119!5.77e-14!312;UBERON:0003056!8.04e-14!61;UBERON:0000475!1.29e-13!365;UBERON:0000483!1.68e-13!309;UBERON:0004111!7.29e-13!241;UBERON:0004121!1.55e-11!169;UBERON:0000033!2.33e-11!123;UBERON:0001637!4.52e-11!42;UBERON:0003509!4.52e-11!42;UBERON:0004572!4.52e-11!42;UBERON:0000468!8.14e-11!659;UBERON:0000467!1.44e-10!625;UBERON:0000477!1.59e-10!286;UBERON:0000480!2.12e-10!626;UBERON:0000924!2.89e-10!173;UBERON:0006601!2.89e-10!173;UBERON:0000153!3.75e-10!129;UBERON:0007811!3.75e-10!129;UBERON:0004573!4.07e-09!33;UBERON:0004571!4.07e-09!33;UBERON:0003076!1.33e-08!15;UBERON:0003057!1.33e-08!15;UBERON:0001981!4.41e-08!60;UBERON:0007500!4.41e-08!60;UBERON:0004537!4.41e-08!60;UBERON:0006965!4.41e-08!60;UBERON:0004732!2.33e-07!13;UBERON:0004733!2.45e-07!12;UBERON:0002028!2.45e-07!12;UBERON:0007277!2.45e-07!12;UBERON:0002049!3.33e-07!79;UBERON:0007798!3.33e-07!79;UBERON:0000923!3.62e-07!604;UBERON:0005291!3.62e-07!604;UBERON:0006598!3.62e-07!604;UBERON:0002532!3.62e-07!604;UBERON:0002050!4.21e-07!605;UBERON:0005423!4.21e-07!605;UBERON:0000055!4.31e-07!69;UBERON:0004290!4.47e-07!70;UBERON:0000922!7.12e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.19e-23;32!UBERON:0001893;8.91e-23;34!UBERON:0002791;1.77e-22;32!UBERON:0003528;1.93e-22;34!UBERON:0002020;1.93e-22;34!UBERON:0000956;1.42e-20;25!UBERON:0000203;1.42e-20;25!UBERON:0002619;1.13e-19;22!UBERON:0000073;1.21e-18;53!UBERON:0002616;1.21e-18;53!UBERON:0002780;2.35e-18;41!UBERON:0001890;2.35e-18;41!UBERON:0001950;4.80e-18;20!UBERON:0001017;2.64e-14;75!UBERON:0000955;1.25e-13;68!UBERON:0001016;8.26e-12;83!UBERON:0004732;7.68e-09;13!UBERON:0004733;8.05e-09;12!UBERON:0002028;8.05e-09;12!UBERON:0004573;1.11e-07;33!UBERON:0004571;1.11e-07;33!UBERON:0001637;1.45e-07;42!UBERON:0003509;1.45e-07;42!UBERON:0004572;1.45e-07;42!UBERON:0002680;2.80e-07;9!UBERON:0001895;2.80e-07;9!UBERON:0002420;2.88e-07;9!UBERON:0007245;2.88e-07;9!UBERON:0010009;2.88e-07;9!UBERON:0010011;2.88e-07;9!UBERON:0000454;2.88e-07;9 | |||
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| |||
|short_description=p5@GDI1 | |||
}} |
Latest revision as of 03:22, 20 September 2015
Short description: | p5@GDI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GDI1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 40bp_to_ENST00000481304_5end |
EntrezGene: | GDI1 |
HGNC: | 4226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.96e-12 | 32 |
smooth muscle cell | 3.72e-09 | 43 |
smooth muscle myoblast | 3.72e-09 | 43 |
muscle precursor cell | 1.73e-07 | 58 |
myoblast | 1.73e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.73e-07 | 58 |
electrically responsive cell | 3.86e-07 | 61 |
electrically active cell | 3.86e-07 | 61 |
muscle cell | 9.65e-07 | 55 |