FFCP PHASE1:Hg19::chr17:38975423..38975442,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38975423..38975442,+
|short_description=p2@TMEM99
|description=CAGE_peak_2_at_TMEM99_5end
|association_with_transcript=0bp_to_NM_001195386_5end
|EntrezGe...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147184 | |EntrezGene=147184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28305 | |HGNC=28305 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N816 | |UniProt=Q8N816 | ||
|association_with_transcript=0bp_to_NM_001195386_5end | |||
|cluster_id=chr17:38975423..38975442,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_2_at_TMEM99_5end | |||
|id=chr17:38975423..38975442,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.03e-12!254;CL:0000220!9.68e-12!246;CL:0002321!4.66e-11!248;CL:0000055!2.44e-08!180;CL:0000223!3.11e-07!59;CL:0000325!4.64e-07!39;CL:0002076!5.62e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.28e-11,253;CL:0002321,7.03e-10,250;CL:0000223,9.18e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.12e-07!143;DOID:14566!3.37e-07!239;DOID:305!4.35e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.43e-07,143;DOID:14566,7.67e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000475!7.82e-12!365;UBERON:0003102!3.37e-10!95;UBERON:0000481!6.89e-10!347;UBERON:0003104!3.51e-09!238;UBERON:0009142!3.51e-09!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.44e-11,99 | |||
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| ||
|short_description=p2@TMEM99 | |||
}} | }} |
Latest revision as of 03:35, 20 September 2015
Short description: | p2@TMEM99 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM99_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 0bp_to_NM_001195386_5end |
EntrezGene: | TMEM99 |
HGNC: | 28305 |
UniProt: | Q8N816 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.28e-11 | 253 |
embryonic cell | 7.03e-10 | 250 |
endodermal cell | 9.18e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.44e-11 | 99 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.43e-07 | 143 |
disease of cellular proliferation | 7.67e-07 | 239 |