FFCP PHASE1:Hg19::chr16:10674528..10674551,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:10674528..10674551,- to FFCP PHASE1:Hg19::chr16:10674528..10674551,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2013 | |EntrezGene=2013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3334 | |HGNC=3334 | ||
|TSSclassifier=strong | |||
|UniProt=P54851 | |UniProt=P54851 | ||
|association_with_transcript=0bp_to_NM_001424,uc002czx.2_5end | |||
|cluster_id=chr16:10674528..10674551,- | |||
|description=CAGE_peak_2_at_EMP2_5end | |||
|id=chr16:10674528..10674551,- | |||
|ontology_enrichment_celltype=CL:0000066!7.34e-14!254;CL:0000055!1.01e-08!180;CL:0002321!6.77e-07!248;CL:0000220!8.43e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.69e-12,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.13e-08;29 | |||
|ontology_enrichment_disease=DOID:0050687!2.71e-11!143;DOID:305!1.13e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.67e-10,143;DOID:305,4.95e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!5.24e-18!347;UBERON:0000468!1.43e-15!659;UBERON:0004119!1.70e-14!169;UBERON:0000925!1.70e-14!169;UBERON:0006595!1.70e-14!169;UBERON:0003104!3.24e-14!238;UBERON:0009142!3.24e-14!238;UBERON:0000475!4.51e-13!365;UBERON:0000467!1.87e-12!625;UBERON:0001007!2.41e-12!155;UBERON:0001555!2.41e-12!155;UBERON:0007026!2.41e-12!155;UBERON:0000480!3.55e-12!626;UBERON:0000119!1.83e-11!312;UBERON:0000064!2.62e-11!219;UBERON:0000483!4.59e-11!309;UBERON:0000077!4.74e-11!130;UBERON:0000922!1.76e-10!612;UBERON:0004921!1.10e-09!129;UBERON:0004185!1.10e-09!129;UBERON:0001048!1.63e-09!168;UBERON:0002050!1.72e-09!605;UBERON:0005423!1.72e-09!605;UBERON:0000923!3.56e-09!604;UBERON:0005291!3.56e-09!604;UBERON:0006598!3.56e-09!604;UBERON:0002532!3.56e-09!604;UBERON:0002100!4.02e-09!216;UBERON:0000062!1.43e-08!511;UBERON:0000477!3.50e-08!286;UBERON:0003102!4.28e-08!95;UBERON:0005177!4.62e-08!107;UBERON:0008947!1.03e-07!38;UBERON:0003258!1.03e-07!38;UBERON:0001041!1.14e-07!98;UBERON:0005256!1.46e-07!143;UBERON:0001004!2.84e-07!72 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.75e-14,160;UBERON:0000925,2.75e-14,160;UBERON:0006595,2.75e-14,160;UBERON:0001007,5.11e-12,145;UBERON:0001555,5.11e-12,145;UBERON:0007026,5.11e-12,145;UBERON:0004921,4.78e-09,118;UBERON:0001048,5.06e-09,160;UBERON:0008947,4.90e-08,38;UBERON:0003258,4.90e-08,38;UBERON:0000119,8.09e-08,309;UBERON:0001041,8.61e-08,87;UBERON:0001004,1.51e-07,74;UBERON:0000483,1.75e-07,306;UBERON:0005177,2.29e-07,101;UBERON:0002100,7.45e-07,199;UBERON:0003104,9.42e-07,160;UBERON:0009142,9.42e-07,160 | |||
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| ||
|short_description=p2@EMP2 | |||
}} | }} |
Latest revision as of 04:30, 20 September 2015
Short description: | p2@EMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EMP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001424, uc002czx.2_5end |
EntrezGene: | EMP2 |
HGNC: | 3334 |
UniProt: | P54851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.69e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.75e-14 | 160 |
endoderm | 2.75e-14 | 160 |
presumptive endoderm | 2.75e-14 | 160 |
digestive system | 5.11e-12 | 145 |
digestive tract | 5.11e-12 | 145 |
primitive gut | 5.11e-12 | 145 |
subdivision of digestive tract | 4.78e-09 | 118 |
primordium | 5.06e-09 | 160 |
respiratory primordium | 4.90e-08 | 38 |
endoderm of foregut | 4.90e-08 | 38 |
cell layer | 8.09e-08 | 309 |
foregut | 8.61e-08 | 87 |
respiratory system | 1.51e-07 | 74 |
epithelium | 1.75e-07 | 306 |
trunk region element | 2.29e-07 | 101 |
trunk | 7.45e-07 | 199 |
mesenchyme | 9.42e-07 | 160 |
entire embryonic mesenchyme | 9.42e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.67e-10 | 143 |
carcinoma | 4.95e-09 | 106 |