FFCP PHASE1:Hg19::chr5:131631044..131631062,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8974 | |EntrezGene=8974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8547 | |HGNC=8547 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENST00000471826,uc003kwm.3_5end | |association_with_transcript=-36bp_to_ENST00000471826,uc003kwm.3_5end | ||
|cluster_id=chr5:131631044..131631062,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_13_at_P4HA2_5end | |description=CAGE_peak_13_at_P4HA2_5end | ||
|id=chr5:131631044..131631062,- | |id=chr5:131631044..131631062,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.13e-57;2!CL:0000558;1.13e-57;2!CL:0000775;8.99e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.13e-57,2;CL:0000765,1.13e-57,2;CL:0000050,1.13e-57,2;CL:0000038,1.13e-57,2;CL:0000558,1.13e-57,2;CL:0000547,1.13e-57,2;CL:0000549,1.13e-57,2;CL:0000550,1.13e-57,2;CL:0000552,1.13e-57,2;CL:0000775,8.17e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.55e-15;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.74e-15,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4015135855886,7.58162807972212,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,2.46174797895425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0.329607748453519,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.588187602953219,0.839107934879214,0.37950746544837,0,0,0,0,0,0,0.0884575645033392,0,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.164230914106418,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.432164393964449,0,0,0.271808412147228,0.313808538937,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0.170388021785422,0.226624183040251,0.146552233678082,0,0,0,0.171086837884329,0,0.213574825135389,1.88645166119599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0.308801447160972,0.219284049578707,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0.333694205676207,0.078493092850514,0,0,0.913158720509496,0,0.9555033757741,0.500335809236594,0,0,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0,0.848915739187391,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0.580120991762195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0.33639558774184,0,0,0.217716747896961,0,0,1.5061663132462,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4015135855886,7.58162807972212,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,2.46174797895425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0.329607748453519,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.588187602953219,0.839107934879214,0.37950746544837,0,0,0,0,0,0,0.0884575645033392,0,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.164230914106418,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.432164393964449,0,0,0.271808412147228,0.313808538937,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0.170388021785422,0.226624183040251,0.146552233678082,0,0,0,0.171086837884329,0,0.213574825135389,1.88645166119599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0.308801447160972,0.219284049578707,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0.333694205676207,0.078493092850514,0,0,0.913158720509496,0,0.9555033757741,0.500335809236594,0,0,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0,0.848915739187391,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0.580120991762195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0.33639558774184,0,0,0.217716747896961,0,0,1.5061663132462,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@P4HA2 | |short_description=p13@P4HA2 | ||
}} | }} |
Latest revision as of 04:37, 20 September 2015
Short description: | p13@P4HA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_P4HA2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -36bp_to_ENST00000471826, uc003kwm.3_5end |
EntrezGene: | P4HA2 |
HGNC: | 8547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.13e-57 | 2 |
erythroblast | 1.13e-57 | 2 |
megakaryocyte-erythroid progenitor cell | 1.13e-57 | 2 |
erythroid progenitor cell | 1.13e-57 | 2 |
reticulocyte | 1.13e-57 | 2 |
proerythroblast | 1.13e-57 | 2 |
basophilic erythroblast | 1.13e-57 | 2 |
polychromatophilic erythroblast | 1.13e-57 | 2 |
orthochromatic erythroblast | 1.13e-57 | 2 |
neutrophil | 8.17e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.74e-15 | 2 |