FFCP PHASE1:Hg19::chr19:58238958..58239000,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79891 | |EntrezGene=79891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26279 | |HGNC=26279 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAW3,C9J3V7 | |UniProt=Q8TAW3,C9J3V7 | ||
|association_with_transcript=0bp_to_ENST00000317398,ENST00000335820,NM_024833,uc002qpz.3,uc010eug.2,uc010yhf.1_5end | |association_with_transcript=0bp_to_ENST00000317398,ENST00000335820,NM_024833,uc002qpz.3,uc010eug.2,uc010yhf.1_5end | ||
|cluster_id=chr19:58238958..58239000,- | |||
|description=CAGE_peak_1_at_ZNF671_5end | |description=CAGE_peak_1_at_ZNF671_5end | ||
|id=chr19:58238958..58239000,- | |id=chr19:58238958..58239000,- | ||
|ontology_enrichment_celltype=CL:0000542!1.60e-10!53;CL:0000051!1.60e-10!53;CL:0000838!2.29e-10!52;CL:0000037!3.07e-08!172;CL:0000566!3.07e-08!172;CL:0000988!3.71e-08!182;CL:0000791!5.67e-08!18;CL:0000789!5.67e-08!18;CL:0002420!5.67e-08!18;CL:0002419!5.67e-08!18;CL:0000790!5.67e-08!18;CL:0000236!8.09e-08!14;CL:0002032!4.12e-07!165;CL:0000837!4.12e-07!165 | |ontology_enrichment_celltype=CL:0000542!1.60e-10!53;CL:0000051!1.60e-10!53;CL:0000838!2.29e-10!52;CL:0000037!3.07e-08!172;CL:0000566!3.07e-08!172;CL:0000988!3.71e-08!182;CL:0000791!5.67e-08!18;CL:0000789!5.67e-08!18;CL:0002420!5.67e-08!18;CL:0002419!5.67e-08!18;CL:0000790!5.67e-08!18;CL:0000236!8.09e-08!14;CL:0002032!4.12e-07!165;CL:0000837!4.12e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.86e-08;18!CL:0000789;2.86e-08;18!CL:0002419;2.86e-08;18!CL:0000236;1.24e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.77e-10,53;CL:0000051,1.77e-10,53;CL:0000838,2.53e-10,52;CL:0000037,3.78e-09,168;CL:0000988,4.62e-09,177;CL:0000791,5.23e-08,18;CL:0000789,5.23e-08,18;CL:0002420,5.23e-08,18;CL:0002419,5.23e-08,18;CL:0000790,5.23e-08,18;CL:0002032,5.94e-08,161;CL:0000837,5.94e-08,161;CL:0000236,7.47e-08,14;CL:0002031,1.35e-07,120;CL:0000738,1.61e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;2.86e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-25!115;UBERON:0001049!1.59e-22!57;UBERON:0005068!1.59e-22!57;UBERON:0006241!1.59e-22!57;UBERON:0007135!1.59e-22!57;UBERON:0002616!9.89e-21!59;UBERON:0001017!7.34e-20!82;UBERON:0002780!8.46e-19!41;UBERON:0001890!8.46e-19!41;UBERON:0006240!8.46e-19!41;UBERON:0005743!1.39e-18!86;UBERON:0003080!6.39e-18!42;UBERON:0000955!4.90e-17!69;UBERON:0006238!4.90e-17!69;UBERON:0003075!2.85e-16!86;UBERON:0007284!2.85e-16!86;UBERON:0000073!4.13e-16!94;UBERON:0001016!4.13e-16!94;UBERON:0002020!1.34e-15!34;UBERON:0003528!1.34e-15!34;UBERON:0001893!3.51e-15!34;UBERON:0002791!6.64e-15!33;UBERON:0001869!1.47e-14!32;UBERON:0002346!9.47e-14!90;UBERON:0003056!2.34e-12!61;UBERON:0000956!1.91e-11!25;UBERON:0000203!1.91e-11!25;UBERON:0002619!2.93e-11!22;UBERON:0001950!1.93e-10!20;UBERON:0000153!2.55e-10!129;UBERON:0007811!2.55e-10!129;UBERON:0000033!2.87e-09!123;UBERON:0004121!1.47e-08!169;UBERON:0000924!2.15e-07!173;UBERON:0006601!2.15e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!1.79e-25!115;UBERON:0001049!1.59e-22!57;UBERON:0005068!1.59e-22!57;UBERON:0006241!1.59e-22!57;UBERON:0007135!1.59e-22!57;UBERON:0002616!9.89e-21!59;UBERON:0001017!7.34e-20!82;UBERON:0002780!8.46e-19!41;UBERON:0001890!8.46e-19!41;UBERON:0006240!8.46e-19!41;UBERON:0005743!1.39e-18!86;UBERON:0003080!6.39e-18!42;UBERON:0000955!4.90e-17!69;UBERON:0006238!4.90e-17!69;UBERON:0003075!2.85e-16!86;UBERON:0007284!2.85e-16!86;UBERON:0000073!4.13e-16!94;UBERON:0001016!4.13e-16!94;UBERON:0002020!1.34e-15!34;UBERON:0003528!1.34e-15!34;UBERON:0001893!3.51e-15!34;UBERON:0002791!6.64e-15!33;UBERON:0001869!1.47e-14!32;UBERON:0002346!9.47e-14!90;UBERON:0003056!2.34e-12!61;UBERON:0000956!1.91e-11!25;UBERON:0000203!1.91e-11!25;UBERON:0002619!2.93e-11!22;UBERON:0001950!1.93e-10!20;UBERON:0000153!2.55e-10!129;UBERON:0007811!2.55e-10!129;UBERON:0000033!2.87e-09!123;UBERON:0004121!1.47e-08!169;UBERON:0000924!2.15e-07!173;UBERON:0006601!2.15e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.39e-14;41!UBERON:0001890;6.39e-14;41!UBERON:0003528;1.18e-13;34!UBERON:0002020;1.18e-13;34!UBERON:0002791;1.44e-13;32!UBERON:0001869;2.01e-13;32!UBERON:0000073;3.05e-13;53!UBERON:0002616;3.05e-13;53!UBERON:0001893;3.27e-13;34!UBERON:0000956;1.12e-11;25!UBERON:0000203;1.12e-11;25!UBERON:0002619;1.58e-11;22!UBERON:0001950;1.07e-10;20!UBERON:0001017;3.75e-09;75!UBERON:0000955;6.34e-09;68!UBERON:0007023;4.96e-08;114!UBERON:0001016;4.77e-07;83 | |||
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| ||
|short_description=p1@ZNF671 | |short_description=p1@ZNF671 | ||
}} | }} |
Latest revision as of 06:09, 20 September 2015
Short description: | p1@ZNF671 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF671_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000317398, ENST00000335820, NM_024833, uc002qpz.3, uc010eug.2, uc010yhf.1_5end |
EntrezGene: | ZNF671 |
HGNC: | 26279 |
UniProt: | Q8TAW3C9J3V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.77e-10 | 53 |
common lymphoid progenitor | 1.77e-10 | 53 |
lymphoid lineage restricted progenitor cell | 2.53e-10 | 52 |
hematopoietic stem cell | 3.78e-09 | 168 |
hematopoietic cell | 4.62e-09 | 177 |
mature alpha-beta T cell | 5.23e-08 | 18 |
alpha-beta T cell | 5.23e-08 | 18 |
immature T cell | 5.23e-08 | 18 |
mature T cell | 5.23e-08 | 18 |
immature alpha-beta T cell | 5.23e-08 | 18 |
hematopoietic oligopotent progenitor cell | 5.94e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.94e-08 | 161 |
B cell | 7.47e-08 | 14 |
hematopoietic lineage restricted progenitor cell | 1.35e-07 | 120 |
leukocyte | 1.61e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.82e-25 | 114 |
neural tube | 1.75e-23 | 56 |
neural rod | 1.75e-23 | 56 |
future spinal cord | 1.75e-23 | 56 |
neural keel | 1.75e-23 | 56 |
regional part of nervous system | 2.84e-22 | 53 |
regional part of brain | 2.84e-22 | 53 |
central nervous system | 1.26e-20 | 81 |
regional part of forebrain | 6.80e-19 | 41 |
forebrain | 6.80e-19 | 41 |
anterior neural tube | 6.80e-19 | 41 |
future forebrain | 6.80e-19 | 41 |
neural plate | 4.52e-18 | 82 |
presumptive neural plate | 4.52e-18 | 82 |
brain | 8.66e-18 | 68 |
future brain | 8.66e-18 | 68 |
nervous system | 1.27e-17 | 89 |
brain grey matter | 1.12e-15 | 34 |
gray matter | 1.12e-15 | 34 |
telencephalon | 2.95e-15 | 34 |
neurectoderm | 3.67e-15 | 86 |
regional part of telencephalon | 8.08e-15 | 32 |
cerebral hemisphere | 1.25e-14 | 32 |
ecto-epithelium | 1.87e-13 | 104 |
pre-chordal neural plate | 3.63e-13 | 61 |
structure with developmental contribution from neural crest | 5.13e-12 | 132 |
cerebral cortex | 1.68e-11 | 25 |
pallium | 1.68e-11 | 25 |
regional part of cerebral cortex | 2.59e-11 | 22 |
neocortex | 1.73e-10 | 20 |
ectoderm-derived structure | 3.60e-08 | 171 |
ectoderm | 3.60e-08 | 171 |
presumptive ectoderm | 3.60e-08 | 171 |