FFCP PHASE1:Hg19::chr6:123958371..123958380,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10345 | |EntrezGene=10345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12261 | |HGNC=12261 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SWK9,Q13061,Q8IVK2 | |UniProt=Q5SWK9,Q13061,Q8IVK2 | ||
|association_with_transcript=-133bp_to_ENST00000334268,NM_001251987,NM_006073_5end | |association_with_transcript=-133bp_to_ENST00000334268,NM_001251987,NM_006073_5end | ||
|cluster_id=chr6:123958371..123958380,- | |||
|coexpression_cluster_id=C72 | |coexpression_cluster_id=C72 | ||
|description=CAGE_peak_12_at_TRDN_5end | |description=CAGE_peak_12_at_TRDN_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.39e-10;31 | |ontology_enrichment_development_v019=UBERON:0003104;3.39e-10;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!5.37e-19!2;UBERON:0001630!6.43e-19!2;UBERON:0005090!6.43e-19!2;UBERON:0001723!9.95e-13!3;UBERON:0001033!9.95e-13!3;UBERON:0010056!9.95e-13!3;UBERON:0007023!1.74e-10!115;UBERON:0005418!1.98e-10!1;UBERON:0001389!1.98e-10!1;UBERON:0000026!1.98e-10!1;UBERON:0008784!1.98e-10!1;UBERON:0006058!1.98e-10!1;UBERON:0003663!1.98e-10!1;UBERON:0001383!1.98e-10!1;UBERON:0004256!1.98e-10!1;UBERON:0002529!1.98e-10!1;UBERON:0004708!1.98e-10!1;UBERON:0002101!1.98e-10!1;UBERON:0004709!1.98e-10!1;UBERON:0003661!1.98e-10!1;UBERON:0002471!1.98e-10!1;UBERON:0004357!1.98e-10!1;UBERON:0009872!1.98e-10!1;UBERON:0004347!1.98e-10!1;UBERON:0005420!1.98e-10!1;UBERON:0005732!1.98e-10!1;UBERON:0006057!1.98e-10!1;UBERON:0000978!1.98e-10!1;UBERON:0002103!1.98e-10!1;UBERON:0001665!1.98e-10!1;UBERON:0003823!1.98e-10!1;UBERON:0000154!1.98e-10!1;UBERON:0005733!1.98e-10!1;UBERON:0005730!1.98e-10!1;UBERON:0000989!2.84e-10!1;UBERON:0008811!2.84e-10!1;UBERON:0006258!2.84e-10!1;UBERON:0005876!2.84e-10!1;UBERON:0004874!2.84e-10!1;UBERON:0002426!3.10e-10!1;UBERON:0003831!3.10e-10!1;UBERON:0003898!3.10e-10!1;UBERON:0004830!3.10e-10!1;UBERON:0001774!3.10e-10!1;UBERON:0003830!3.10e-10!1;UBERON:0005175!3.10e-10!1;UBERON:0003897!3.10e-10!1;UBERON:0001103!3.10e-10!1;UBERON:0010084!3.10e-10!1;UBERON:0002084!3.71e-10!1;UBERON:0002082!3.71e-10!1;UBERON:0004706!3.71e-10!1;UBERON:0007029!4.44e-10!1;UBERON:0001301!6.33e-10!1;UBERON:0002372!1.07e-09!1;UBERON:0001961!1.07e-09!1;UBERON:0001744!1.07e-09!1;UBERON:0001735!1.07e-09!1;UBERON:0002022!1.17e-09!1;UBERON:0001042!2.34e-08!10;UBERON:0009145!2.34e-08!10;UBERON:0006562!1.22e-07!11;UBERON:0003103!5.26e-07!69 | |ontology_enrichment_uberon=UBERON:0000341!5.37e-19!2;UBERON:0001630!6.43e-19!2;UBERON:0005090!6.43e-19!2;UBERON:0001723!9.95e-13!3;UBERON:0001033!9.95e-13!3;UBERON:0010056!9.95e-13!3;UBERON:0007023!1.74e-10!115;UBERON:0005418!1.98e-10!1;UBERON:0001389!1.98e-10!1;UBERON:0000026!1.98e-10!1;UBERON:0008784!1.98e-10!1;UBERON:0006058!1.98e-10!1;UBERON:0003663!1.98e-10!1;UBERON:0001383!1.98e-10!1;UBERON:0004256!1.98e-10!1;UBERON:0002529!1.98e-10!1;UBERON:0004708!1.98e-10!1;UBERON:0002101!1.98e-10!1;UBERON:0004709!1.98e-10!1;UBERON:0003661!1.98e-10!1;UBERON:0002471!1.98e-10!1;UBERON:0004357!1.98e-10!1;UBERON:0009872!1.98e-10!1;UBERON:0004347!1.98e-10!1;UBERON:0005420!1.98e-10!1;UBERON:0005732!1.98e-10!1;UBERON:0006057!1.98e-10!1;UBERON:0000978!1.98e-10!1;UBERON:0002103!1.98e-10!1;UBERON:0001665!1.98e-10!1;UBERON:0003823!1.98e-10!1;UBERON:0000154!1.98e-10!1;UBERON:0005733!1.98e-10!1;UBERON:0005730!1.98e-10!1;UBERON:0000989!2.84e-10!1;UBERON:0008811!2.84e-10!1;UBERON:0006258!2.84e-10!1;UBERON:0005876!2.84e-10!1;UBERON:0004874!2.84e-10!1;UBERON:0002426!3.10e-10!1;UBERON:0003831!3.10e-10!1;UBERON:0003898!3.10e-10!1;UBERON:0004830!3.10e-10!1;UBERON:0001774!3.10e-10!1;UBERON:0003830!3.10e-10!1;UBERON:0005175!3.10e-10!1;UBERON:0003897!3.10e-10!1;UBERON:0001103!3.10e-10!1;UBERON:0010084!3.10e-10!1;UBERON:0002084!3.71e-10!1;UBERON:0002082!3.71e-10!1;UBERON:0004706!3.71e-10!1;UBERON:0007029!4.44e-10!1;UBERON:0001301!6.33e-10!1;UBERON:0002372!1.07e-09!1;UBERON:0001961!1.07e-09!1;UBERON:0001744!1.07e-09!1;UBERON:0001735!1.07e-09!1;UBERON:0002022!1.17e-09!1;UBERON:0001042!2.34e-08!10;UBERON:0009145!2.34e-08!10;UBERON:0006562!1.22e-07!11;UBERON:0003103!5.26e-07!69 | ||
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|short_description=p12@TRDN | |short_description=p12@TRDN | ||
}} | }} |
Latest revision as of 06:19, 20 September 2015
Short description: | p12@TRDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TRDN_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | -133bp_to_ENST00000334268, NM_001251987, NM_006073_5end |
EntrezGene: | TRDN |
HGNC: | 12261 |
UniProt: | Q5SWK9Q13061Q8IVK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 5.53e-66 | 2 |
hindlimb bud | 3.61e-34 | 1 |
soleus muscle | 3.61e-34 | 1 |
appendage | 3.61e-34 | 1 |
lower limb segment | 3.61e-34 | 1 |
multi-limb segment region | 3.61e-34 | 1 |
hindlimb muscle | 3.61e-34 | 1 |
hindlimb zeugopod muscle | 3.61e-34 | 1 |
paired limb/fin | 3.61e-34 | 1 |
limb | 3.61e-34 | 1 |
pelvic appendage | 3.61e-34 | 1 |
limb segment | 3.61e-34 | 1 |
paired limb/fin segment | 3.61e-34 | 1 |
limb muscle | 3.61e-34 | 1 |
pelvic complex muscle | 3.61e-34 | 1 |
zeugopod | 3.61e-34 | 1 |
muscle of leg | 3.61e-34 | 1 |
paired limb/fin bud | 3.61e-34 | 1 |
limb bud | 3.61e-34 | 1 |
pelvic appendage bud | 3.61e-34 | 1 |
limb/fin field | 3.61e-34 | 1 |
subdivision of organism along appendicular axis | 3.61e-34 | 1 |
appendage girdle complex | 3.61e-34 | 1 |
leg | 3.61e-34 | 1 |
hindlimb | 3.61e-34 | 1 |
triceps surae | 3.61e-34 | 1 |
hindlimb zeugopod | 3.61e-34 | 1 |
posterior region of body | 3.61e-34 | 1 |
pelvic complex | 3.61e-34 | 1 |
limb field | 3.61e-34 | 1 |
hindlimb/pelvic fin field | 3.61e-34 | 1 |
muscle structure | 7.67e-18 | 2 |
muscle organ | 7.67e-18 | 2 |
neck | 3.71e-14 | 10 |
tongue | 3.24e-12 | 3 |
gustatory system | 3.24e-12 | 3 |
future tongue | 3.24e-12 | 3 |