FFCP PHASE1:Hg19::chr1:207103645..207103668,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8968 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AY178835_5end | |||
|cluster_id=chr1:207103645..207103668,- | |||
|coexpression_cluster_id=C435 | |||
|description=CAGE_peak_9_at_PIGR_5end | |||
|id=chr1:207103645..207103668,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;5.98e-16;1!UBERON:0008801;9.99e-16;1!UBERON:0006242;1.44e-15;1!UBERON:0001045;2.56e-15;1!UBERON:0006595;8.30e-09;86!UBERON:0006965;2.57e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.60e-15!115;UBERON:0001829!2.84e-11!2;UBERON:0003127!8.36e-11!2;UBERON:0000341!1.17e-10!2;UBERON:0004921!3.02e-10!129;UBERON:0004185!3.02e-10!129;UBERON:0000160!5.56e-10!27;UBERON:0001007!6.73e-10!155;UBERON:0001555!6.73e-10!155;UBERON:0007026!6.73e-10!155;UBERON:0001155!5.64e-09!9;UBERON:0004119!1.11e-08!169;UBERON:0000925!1.11e-08!169;UBERON:0006595!1.11e-08!169;UBERON:0001044!3.13e-08!6;UBERON:0003293!3.13e-08!6;UBERON:0003294!3.13e-08!6;UBERON:0010047!3.13e-08!6;UBERON:0000167!3.13e-08!6;UBERON:0005409!1.78e-07!35;UBERON:0000059!2.40e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.48e-30;2!UBERON:0004921;1.73e-22;33!UBERON:0001044;2.54e-22;6!UBERON:0003293;2.54e-22;6!UBERON:0003294;2.54e-22;6!UBERON:0010047;2.54e-22;6!UBERON:0003408;2.54e-22;6!UBERON:0000167;2.54e-22;6!UBERON:0000160;8.86e-20;17!UBERON:0001736;5.98e-16;1!UBERON:0001831;9.99e-16;1!UBERON:0001567;9.99e-16;1!UBERON:0005409;1.71e-15;22!UBERON:0001154;2.56e-15;1!UBERON:0001153;2.56e-15;1!UBERON:0009854;2.56e-15;1!UBERON:0001155;7.35e-15;9!UBERON:0002108;2.12e-12;4!UBERON:0000059;2.84e-12;11!UBERON:0001555;4.18e-11;54!UBERON:0001041;6.33e-10;14!UBERON:0004089;1.61e-08;2!UBERON:0003127;1.93e-08;2!UBERON:0000341;2.57e-08;2!UBERON:0001007;1.46e-07;81!UBERON:0000161;1.89e-07;19!UBERON:0000166;1.89e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,6.96e-30,2;UBERON:0001044,2.45e-22,6;UBERON:0003293,2.45e-22,6;UBERON:0003294,2.45e-22,6;UBERON:0010047,2.45e-22,6;UBERON:0000167,2.45e-22,6;UBERON:0000160,9.04e-20,17;UBERON:0007023,9.59e-17,114;UBERON:0001736,5.56e-16,1;UBERON:0006298,5.56e-16,1;UBERON:0001831,9.99e-16,1;UBERON:0001567,9.99e-16,1;UBERON:0008801,9.99e-16,1;UBERON:0001154,3.66e-15,1;UBERON:0001153,3.66e-15,1;UBERON:0001045,3.66e-15,1;UBERON:0001155,8.27e-15,9;UBERON:0005409,1.05e-13,25;UBERON:0003408,1.14e-13,10;UBERON:0002108,1.89e-12,4;UBERON:0000059,3.13e-12,11;UBERON:0004921,5.69e-11,118;UBERON:0001007,1.12e-10,145;UBERON:0001555,1.12e-10,145;UBERON:0007026,1.12e-10,145;UBERON:0004119,1.44e-09,160;UBERON:0000925,1.44e-09,160;UBERON:0006595,1.44e-09,160;UBERON:0004089,1.61e-08,2;UBERON:0003127,2.00e-08,2;UBERON:0000341,2.48e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,1.10513566212459,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,3.98104772431402,5.92665682172372,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709251365692784,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49502377594773,0,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,4.38606213485746,0.992422356778588,0,0.511049710558381,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,6.02318302348389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5761237161917,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,11.9269613685181,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.27940389140589,0.23806443146374,0,0,0,0,0.202117188958219,0.217716747896961,0,0.134704106029175,2.22338836717297,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@PIGR | |||
}} |
Latest revision as of 06:39, 20 September 2015
Short description: | p9@PIGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PIGR_5end |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | 0bp_to_AY178835_5end |
EntrezGene: | PIGR |
HGNC: | 8968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 6.96e-30 | 2 |
saliva-secreting gland | 2.45e-22 | 6 |
gland of oral region | 2.45e-22 | 6 |
gland of foregut | 2.45e-22 | 6 |
oral gland | 2.45e-22 | 6 |
oral cavity | 2.45e-22 | 6 |
intestine | 9.04e-20 | 17 |
adult organism | 9.59e-17 | 114 |
submandibular gland | 5.56e-16 | 1 |
submandibular gland primordium | 5.56e-16 | 1 |
parotid gland | 9.99e-16 | 1 |
cheek | 9.99e-16 | 1 |
parotid gland primordium | 9.99e-16 | 1 |
vermiform appendix | 3.66e-15 | 1 |
caecum | 3.66e-15 | 1 |
midgut | 3.66e-15 | 1 |
colon | 8.27e-15 | 9 |
gastrointestinal system | 1.05e-13 | 25 |
gland of gut | 1.14e-13 | 10 |
small intestine | 1.89e-12 | 4 |
large intestine | 3.13e-12 | 11 |
subdivision of digestive tract | 5.69e-11 | 118 |
digestive system | 1.12e-10 | 145 |
digestive tract | 1.12e-10 | 145 |
primitive gut | 1.12e-10 | 145 |
endoderm-derived structure | 1.44e-09 | 160 |
endoderm | 1.44e-09 | 160 |
presumptive endoderm | 1.44e-09 | 160 |
midface | 1.61e-08 | 2 |
open tracheal system trachea | 2.00e-08 | 2 |
throat | 2.48e-08 | 2 |