FFCP PHASE2:Hg19::chr18:67624420..67624431,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10666 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16961 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16961 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q15762 | ||
|association_with_transcript=-188bp_to_NM_006566,uc002lkm.3_5end | |association_with_transcript=-188bp_to_NM_006566,uc002lkm.3_5end | ||
|cluster_id=chr18:67624420..67624431,- | |cluster_id=chr18:67624420..67624431,- |
Latest revision as of 06:51, 20 September 2015
Short description: | p6@CD226 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD226_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -188bp_to_NM_006566, uc002lkm.3_5end |
EntrezGene: | CD226 |
HGNC: | 16961 |
UniProt: | Q15762 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@CD226 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mature alpha-beta T cell | 4.11e-38 | 18 |
alpha-beta T cell | 4.11e-38 | 18 |
immature T cell | 4.11e-38 | 18 |
mature T cell | 4.11e-38 | 18 |
immature alpha-beta T cell | 4.11e-38 | 18 |
T cell | 1.34e-30 | 25 |
pro-T cell | 1.34e-30 | 25 |
CD8-positive, alpha-beta T cell | 3.37e-26 | 11 |
nongranular leukocyte | 3.60e-16 | 115 |
CD4-positive, alpha-beta T cell | 5.89e-16 | 6 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
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blood | 3.88e-14 | 15 |
haemolymphatic fluid | 3.88e-14 | 15 |
organism substance | 3.88e-14 | 15 |
hematopoietic system | 1.92e-09 | 98 |
blood island | 1.92e-09 | 98 |
thymus | 8.60e-09 | 4 |
hemolymphoid system gland | 8.60e-09 | 4 |
thymic region | 8.60e-09 | 4 |
pharyngeal gland | 8.60e-09 | 4 |
thymus primordium | 8.60e-09 | 4 |
Showing 1 to 10 of 13 entries