FFCP PHASE1:Hg19::chr19:58629742..58629787,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:58629742..58629787,-
|short_description=p2@ZSCAN18
|description=CAGE_peak_2_at_ZSCAN18_5end
|association_with_transcript=5bp_to_ENST00000433686,NM_0011455...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=65982 | |EntrezGene=65982 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21037 | |HGNC=21037 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TBC5,B4DG23 | |UniProt=Q8TBC5,B4DG23 | ||
|association_with_transcript=5bp_to_ENST00000433686,NM_001145542,NR_027135,uc002qrm.2,uc010yht.1_5end | |||
|cluster_id=chr19:58629742..58629787,- | |||
|description=CAGE_peak_2_at_ZSCAN18_5end | |||
|id=chr19:58629742..58629787,- | |||
|ontology_enrichment_celltype=CL:0000047!1.02e-10!8;CL:0000540!9.63e-08!6;CL:0000031!9.63e-08!6;CL:0000404!9.63e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.24e-13;6!CL:0000404;9.24e-13;6!CL:0000039;1.69e-11;7!CL:0000586;1.69e-11;7!CL:0000047;3.79e-10;2!CL:0000097;2.44e-09;5!CL:0002322;5.78e-09;5!CL:0000163;6.78e-09;9!CL:0002319;1.46e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.79e-20,8;CL:0000540,1.08e-12,6;CL:0000031,1.08e-12,6;CL:0000404,1.08e-12,6;CL:0000039,1.54e-11,7;CL:0000586,1.54e-11,7;CL:0000097,2.38e-09,5;CL:0002028,2.38e-09,5;CL:0002322,4.56e-09,5;CL:0000163,6.71e-09,9;CL:0002319,1.79e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-17;10!UBERON:0005564;1.89e-17;10!UBERON:0006215;2.31e-16;3!CL:0000031;9.24e-13;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!8.63e-20!86;UBERON:0001017!1.23e-18!82;UBERON:0000073!7.67e-17!94;UBERON:0001016!7.67e-17!94;UBERON:0001049!5.24e-15!57;UBERON:0005068!5.24e-15!57;UBERON:0006241!5.24e-15!57;UBERON:0007135!5.24e-15!57;UBERON:0003075!1.19e-14!86;UBERON:0007284!1.19e-14!86;UBERON:0002616!3.11e-14!59;UBERON:0002346!1.47e-13!90;UBERON:0000955!5.89e-13!69;UBERON:0006238!5.89e-13!69;UBERON:0002780!4.71e-12!41;UBERON:0001890!4.71e-12!41;UBERON:0006240!4.71e-12!41;UBERON:0000153!5.12e-12!129;UBERON:0007811!5.12e-12!129;UBERON:0004121!7.78e-12!169;UBERON:0003080!1.23e-11!42;UBERON:0000924!2.94e-11!173;UBERON:0006601!2.94e-11!173;UBERON:0003056!5.90e-11!61;UBERON:0000033!1.12e-10!123;UBERON:0001869!1.37e-10!32;UBERON:0002791!3.84e-10!33;UBERON:0002020!1.01e-09!34;UBERON:0003528!1.01e-09!34;UBERON:0001893!1.01e-09!34;UBERON:0000956!1.16e-09!25;UBERON:0000203!1.16e-09!25;UBERON:0007023!1.25e-08!115;UBERON:0000473!1.28e-08!8;UBERON:0002619!2.94e-08!22;UBERON:0001950!6.15e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.86e-22;8!UBERON:0000922;1.65e-16;49!UBERON:0003135;8.28e-16;11!UBERON:0002037;2.14e-08;6!UBERON:0000991;5.60e-08;21!UBERON:0003101;1.38e-07;22!UBERON:0000079;1.38e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.17e-22,8;UBERON:0003135,7.57e-16,11;UBERON:0002037,2.14e-08,6;UBERON:0006215,2.14e-08,6;UBERON:0001017,2.32e-08,81;UBERON:0000991,5.35e-08,21;UBERON:0009196,5.35e-08,21;UBERON:0009117,5.35e-08,21;UBERON:0005564,5.35e-08,21;UBERON:0004176,1.32e-07,22;UBERON:0003101,1.32e-07,22;UBERON:0000079,1.32e-07,22;UBERON:0001016,2.88e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,2.29213382120997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,1.70763188581434,0.530119073285941,2.78865462886844,0,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648119116109707,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1832028885193,1.72943944100354,3.02981840223312,0.190493682876507,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,1.30139853857622,0.773288812777695,2.51274398001523,1.27587750330633,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.902399225814824,0.539107359730903,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0.640986253728404,0.990113999047056,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6072710684484,0,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,9.98068990005971,0,0,0,0,0,0,0,0,0,0,0.482385754501632,10.6807215421958,21.3417971667264,10.3441666633742,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,1.83643656978294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,1.80784592624426,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,1.07493555978762,0,0,0,0,0,0,0,0,0.136203406111576,0,2.06309154895851,1.66176135211674,0,0,0.182248669974074,0,0.157611414598396,1.20645552710496,4.43521413381507,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887432412294818,0.124192805882767,0,0,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62287592977528,0,0,0,0,5.38420749914229,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,4.28521883576921,0.138314504928436,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,4.92277328116398,0,0,0,0,0,1.00885116665647,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0,0.314231179832004,0,1.82631744101899,0.215927591218621,0,3.28792103212619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.154348316215889,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,2.61810414204226,0.5290268405154,0,0,0,0,6.88373103371282,0,2.54972074354954,5.87878291584233,4.87042967534678,2.50707539292375,4.69827928953084,9.37874455546625,0,0,0.639701945702943,1.90451545170992,0,0.186224142887574,0,1.46388464039779,2.22328907854041,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,2.29213382120997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,1.70763188581434,0.530119073285941,2.78865462886844,0,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648119116109707,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1832028885193,1.72943944100354,3.02981840223312,0.190493682876507,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,1.30139853857622,0.773288812777695,2.51274398001523,1.27587750330633,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.902399225814824,0.539107359730903,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0.640986253728404,0.990113999047056,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6072710684484,0,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,9.98068990005971,0,0,0,0,0,0,0,0,0,0,0.482385754501632,10.6807215421958,21.3417971667264,10.3441666633742,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,1.83643656978294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,1.80784592624426,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,1.07493555978762,0,0,0,0,0,0,0,0,0.136203406111576,0,2.06309154895851,1.66176135211674,0,0,0.182248669974074,0,0.157611414598396,1.20645552710496,4.43521413381507,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887432412294818,0.124192805882767,0,0,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62287592977528,0,0,0,0,5.38420749914229,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,4.28521883576921,0.138314504928436,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,4.92277328116398,0,0,0,0,0,1.00885116665647,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0,0.314231179832004,0,1.82631744101899,0.215927591218621,0,3.28792103212619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.154348316215889,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,2.61810414204226,0.5290268405154,0,0,0,0,6.88373103371282,0,2.54972074354954,5.87878291584233,4.87042967534678,2.50707539292375,4.69827928953084,9.37874455546625,0,0,0.639701945702943,1.90451545170992,0,0.186224142887574,0,1.46388464039779,2.22328907854041,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p2@ZSCAN18 | |||
}} | }} |
Latest revision as of 07:01, 20 September 2015
Short description: | p2@ZSCAN18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZSCAN18_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000433686, NM_001145542, NR_027135, uc002qrm.2, uc010yht.1_5end |
EntrezGene: | ZSCAN18 |
HGNC: | 21037 |
UniProt: | Q8TBC5B4DG23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.79e-20 | 8 |
neuron | 1.08e-12 | 6 |
neuroblast | 1.08e-12 | 6 |
electrically signaling cell | 1.08e-12 | 6 |
germ line cell | 1.54e-11 | 7 |
germ cell | 1.54e-11 | 7 |
mast cell | 2.38e-09 | 5 |
basophil mast progenitor cell | 2.38e-09 | 5 |
embryonic stem cell | 4.56e-09 | 5 |
endocrine cell | 6.71e-09 | 9 |
neural cell | 1.79e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
testis | 5.17e-22 | 8 |
male reproductive organ | 7.57e-16 | 11 |
cerebellum | 2.14e-08 | 6 |
rhombic lip | 2.14e-08 | 6 |
central nervous system | 2.32e-08 | 81 |
gonad | 5.35e-08 | 21 |
indifferent external genitalia | 5.35e-08 | 21 |
indifferent gonad | 5.35e-08 | 21 |
gonad primordium | 5.35e-08 | 21 |
external genitalia | 1.32e-07 | 22 |
male organism | 1.32e-07 | 22 |
male reproductive system | 1.32e-07 | 22 |
nervous system | 2.88e-07 | 89 |