FFCP PHASE1:Hg19::chr7:100202771..100202805,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5118 | |EntrezGene=5118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8738 | |HGNC=8738 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000486440_5end | |association_with_transcript=0bp_to_ENST00000486440_5end | ||
|cluster_id=chr7:100202771..100202805,+ | |||
|coexpression_cluster_id=C1779 | |coexpression_cluster_id=C1779 | ||
|description=CAGE_peak_7_at_PCOLCE_5end | |description=CAGE_peak_7_at_PCOLCE_5end | ||
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|ontology_enrichment_celltype=CL:0000055!7.48e-48!180;CL:0000057!1.56e-26!75;CL:0000680!8.45e-17!57;CL:0000056!8.45e-17!57;CL:0000355!8.45e-17!57;CL:0000183!2.87e-16!59;CL:0000187!3.50e-16!54;CL:0000393!1.49e-14!60;CL:0000211!1.49e-14!60;CL:0000192!1.84e-11!42;CL:0000514!1.84e-11!42;CL:0002620!8.48e-11!23;CL:0000048!1.74e-10!430;CL:0000723!1.57e-09!436;CL:0000034!3.39e-09!444;CL:0000359!3.10e-07!32;CL:0000499!4.10e-07!27 | |ontology_enrichment_celltype=CL:0000055!7.48e-48!180;CL:0000057!1.56e-26!75;CL:0000680!8.45e-17!57;CL:0000056!8.45e-17!57;CL:0000355!8.45e-17!57;CL:0000183!2.87e-16!59;CL:0000187!3.50e-16!54;CL:0000393!1.49e-14!60;CL:0000211!1.49e-14!60;CL:0000192!1.84e-11!42;CL:0000514!1.84e-11!42;CL:0002620!8.48e-11!23;CL:0000048!1.74e-10!430;CL:0000723!1.57e-09!436;CL:0000034!3.39e-09!444;CL:0000359!3.10e-07!32;CL:0000499!4.10e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.14e-11;23!CL:0000057;2.81e-10;73!CL:0000499;9.25e-10;28!CL:0000187;1.35e-09;55!CL:0002320;1.42e-08;188!CL:0000393;1.48e-08;61!CL:0000211;1.48e-08;61!CL:0000192;2.31e-08;43!CL:0000327;8.39e-08;15!CL:0000134;3.48e-07;55!CL:0000188;4.58e-07;9!CL:0000723;5.12e-07;61 | |ontology_enrichment_celltype_v019=CL:0002620;2.14e-11;23!CL:0000057;2.81e-10;73!CL:0000499;9.25e-10;28!CL:0000187;1.35e-09;55!CL:0002320;1.42e-08;188!CL:0000393;1.48e-08;61!CL:0000211;1.48e-08;61!CL:0000192;2.31e-08;43!CL:0000327;8.39e-08;15!CL:0000134;3.48e-07;55!CL:0000188;4.58e-07;9!CL:0000723;5.12e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.41e-28,76;CL:0000048,2.76e-21,427;CL:0000723,2.38e-20,433;CL:0000034,3.79e-19,441;CL:0000187,2.63e-16,55;CL:0000680,6.75e-16,58;CL:0000056,6.75e-16,58;CL:0000355,6.75e-16,58;CL:0000393,2.72e-14,61;CL:0000211,2.72e-14,61;CL:0002320,9.79e-13,361;CL:0002620,1.23e-11,23;CL:0000192,9.89e-11,43;CL:0000514,9.89e-11,43;CL:0000134,9.26e-10,354;CL:0000499,1.33e-09,28;CL:0000219,8.65e-08,386;CL:0000327,1.22e-07,15;CL:0000188,5.97e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;4.15e-09;58!CL:0000514;2.31e-08;43 | |ontology_enrichment_development_v019=CL:0000355;4.15e-09;58!CL:0000514;2.31e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.16e-21!83;UBERON:0002329!5.16e-21!83;UBERON:0003077!5.16e-21!83;UBERON:0003059!5.16e-21!83;UBERON:0007282!5.16e-21!83;UBERON:0009618!5.16e-21!83;UBERON:0007285!5.16e-21!83;UBERON:0004290!4.30e-19!70;UBERON:0002385!2.60e-17!63;UBERON:0001015!2.60e-17!63;UBERON:0000383!2.60e-17!63;UBERON:0001134!4.90e-17!61;UBERON:0002036!4.90e-17!61;UBERON:0003082!4.90e-17!61;UBERON:0000486!8.04e-16!82;UBERON:0005256!9.46e-13!143;UBERON:0003102!6.94e-11!95;UBERON:0002199!9.17e-11!45;UBERON:0002416!9.17e-11!45;UBERON:0000475!1.20e-09!365;UBERON:0002100!8.33e-09!216;UBERON:0002097!3.05e-08!40;UBERON:0004872!3.07e-07!84;UBERON:0001013!8.77e-07!14 | |ontology_enrichment_uberon=UBERON:0000914!5.16e-21!83;UBERON:0002329!5.16e-21!83;UBERON:0003077!5.16e-21!83;UBERON:0003059!5.16e-21!83;UBERON:0007282!5.16e-21!83;UBERON:0009618!5.16e-21!83;UBERON:0007285!5.16e-21!83;UBERON:0004290!4.30e-19!70;UBERON:0002385!2.60e-17!63;UBERON:0001015!2.60e-17!63;UBERON:0000383!2.60e-17!63;UBERON:0001134!4.90e-17!61;UBERON:0002036!4.90e-17!61;UBERON:0003082!4.90e-17!61;UBERON:0000486!8.04e-16!82;UBERON:0005256!9.46e-13!143;UBERON:0003102!6.94e-11!95;UBERON:0002199!9.17e-11!45;UBERON:0002416!9.17e-11!45;UBERON:0000475!1.20e-09!365;UBERON:0002100!8.33e-09!216;UBERON:0002097!3.05e-08!40;UBERON:0004872!3.07e-07!84;UBERON:0001013!8.77e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.91e-09;198!UBERON:0002385;1.09e-08;31!UBERON:0001015;1.09e-08;31!UBERON:0000383;1.09e-08;31!UBERON:0002204;1.15e-08;70!UBERON:0002199;5.59e-08;46!UBERON:0002416;5.59e-08;46!UBERON:0000075;7.80e-08;16!UBERON:0004905;8.54e-08;8!UBERON:0000982;8.54e-08;8!UBERON:0004770;8.54e-08;8!UBERON:0001013;8.97e-08;14!UBERON:0003102;2.95e-07;50!UBERON:0011135;5.60e-07;5!UBERON:0002216;5.60e-07;5!UBERON:0011134;5.60e-07;5!UBERON:0002209;5.60e-07;5!UBERON:0002213;5.60e-07;5!UBERON:0007844;5.60e-07;5!UBERON:0011138;5.60e-07;5!UBERON:0001130;5.60e-07;5!UBERON:0001066;5.60e-07;5!UBERON:0001468;5.60e-07;5!UBERON:0001434;6.87e-07;36!UBERON:0002097;7.00e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002384;2.91e-09;198!UBERON:0002385;1.09e-08;31!UBERON:0001015;1.09e-08;31!UBERON:0000383;1.09e-08;31!UBERON:0002204;1.15e-08;70!UBERON:0002199;5.59e-08;46!UBERON:0002416;5.59e-08;46!UBERON:0000075;7.80e-08;16!UBERON:0004905;8.54e-08;8!UBERON:0000982;8.54e-08;8!UBERON:0004770;8.54e-08;8!UBERON:0001013;8.97e-08;14!UBERON:0003102;2.95e-07;50!UBERON:0011135;5.60e-07;5!UBERON:0002216;5.60e-07;5!UBERON:0011134;5.60e-07;5!UBERON:0002209;5.60e-07;5!UBERON:0002213;5.60e-07;5!UBERON:0007844;5.60e-07;5!UBERON:0011138;5.60e-07;5!UBERON:0001130;5.60e-07;5!UBERON:0001066;5.60e-07;5!UBERON:0001468;5.60e-07;5!UBERON:0001434;6.87e-07;36!UBERON:0002097;7.00e-07;41 | ||
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| ||
|short_description=p7@PCOLCE | |short_description=p7@PCOLCE | ||
}} | }} |
Latest revision as of 07:47, 20 September 2015
Short description: | p7@PCOLCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PCOLCE_5end |
Coexpression cluster: | C1779_Osteoblast_Fibroblast_Mesenchymal_Smooth_normal_Pericytes_Nucleus |
Association with transcript: | 0bp_to_ENST00000486440_5end |
EntrezGene: | PCOLCE |
HGNC: | 8738 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.41e-28 | 76 |
multi fate stem cell | 2.76e-21 | 427 |
somatic stem cell | 2.38e-20 | 433 |
stem cell | 3.79e-19 | 441 |
muscle cell | 2.63e-16 | 55 |
muscle precursor cell | 6.75e-16 | 58 |
myoblast | 6.75e-16 | 58 |
multi-potent skeletal muscle stem cell | 6.75e-16 | 58 |
electrically responsive cell | 2.72e-14 | 61 |
electrically active cell | 2.72e-14 | 61 |
connective tissue cell | 9.79e-13 | 361 |
skin fibroblast | 1.23e-11 | 23 |
smooth muscle cell | 9.89e-11 | 43 |
smooth muscle myoblast | 9.89e-11 | 43 |
mesenchymal cell | 9.26e-10 | 354 |
stromal cell | 1.33e-09 | 28 |
motile cell | 8.65e-08 | 386 |
extracellular matrix secreting cell | 1.22e-07 | 15 |
cell of skeletal muscle | 5.97e-07 | 9 |