FFCP PHASE1:Hg19::chr11:76380996..76381024,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2615 | |EntrezGene=2615 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4161 | |HGNC=4161 | ||
|TSSclassifier=strong | |||
|UniProt=Q14392,C9JYU3 | |UniProt=Q14392,C9JYU3 | ||
|association_with_transcript=19bp_to_ENST00000407242,ENST00000421973,NM_005512,uc001oxq.3,uc010rsf.1_5end | |association_with_transcript=19bp_to_ENST00000407242,ENST00000421973,NM_005512,uc001oxq.3,uc010rsf.1_5end | ||
|cluster_id=chr11:76380996..76381024,- | |||
|coexpression_cluster_id=C2167 | |||
|description=CAGE_peak_3_at_LRRC32_5end | |description=CAGE_peak_3_at_LRRC32_5end | ||
|id=chr11:76380996..76381024,- | |id=chr11:76380996..76381024,- | ||
|ontology_enrichment_celltype=CL:0000055!4.03e-17!180;CL:0000057!3.08e-13!75;CL:0000222!7.55e-12!119;CL:0000183!8.19e-12!59;CL:0002334!4.30e-11!12;CL:0000680!5.87e-11!57;CL:0000056!5.87e-11!57;CL:0000355!5.87e-11!57;CL:0000187!1.34e-10!54;CL:0002139!1.69e-10!24;CL:0000115!9.61e-10!35;CL:0000136!9.23e-09!15;CL:0000393!3.27e-08!60;CL:0000211!3.27e-08!60;CL:0000192!4.60e-08!42;CL:0000514!4.60e-08!42;CL:0002570!1.16e-07!8;CL:0002078!2.10e-07!44;CL:0002494!4.83e-07!16;CL:0000071!9.52e-07!18;CL:0002546!9.52e-07!18 | |ontology_enrichment_celltype=CL:0000055!4.03e-17!180;CL:0000057!3.08e-13!75;CL:0000222!7.55e-12!119;CL:0000183!8.19e-12!59;CL:0002334!4.30e-11!12;CL:0000680!5.87e-11!57;CL:0000056!5.87e-11!57;CL:0000355!5.87e-11!57;CL:0000187!1.34e-10!54;CL:0002139!1.69e-10!24;CL:0000115!9.61e-10!35;CL:0000136!9.23e-09!15;CL:0000393!3.27e-08!60;CL:0000211!3.27e-08!60;CL:0000192!4.60e-08!42;CL:0000514!4.60e-08!42;CL:0002570!1.16e-07!8;CL:0002078!2.10e-07!44;CL:0002494!4.83e-07!16;CL:0000071!9.52e-07!18;CL:0002546!9.52e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002334;5.25e-17;12!CL:0002570;1.73e-11;8!CL:0000115;6.30e-11;36!CL:0002139;9.65e-11;24!CL:0002494;2.85e-10;16!CL:0000134;4.80e-09;55!CL:0002138;3.06e-08;6!CL:0000048;7.86e-08;58!CL:0002078;1.15e-07;45!CL:0000136;2.49e-07;13!CL:0000723;7.92e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,4.35e-17,12;CL:0000222,6.16e-14,121;CL:0000115,4.85e-13,36;CL:0000057,7.42e-13,76;CL:0000048,1.14e-12,427;CL:0000723,4.54e-12,433;CL:0002570,1.67e-11,8;CL:0000034,2.66e-11,441;CL:0002078,3.16e-11,45;CL:0002139,7.52e-11,24;CL:0002494,2.46e-10,16;CL:0000136,2.14e-09,15;CL:0005020,2.76e-08,6;CL:0002138,2.76e-08,6;CL:0005022,2.76e-08,6;CL:0000680,5.46e-08,58;CL:0000056,5.46e-08,58;CL:0000355,5.46e-08,58;CL:0000187,2.80e-07,55;CL:0000213,3.59e-07,58;CL:0000215,3.59e-07,58;CL:0000192,8.70e-07,43;CL:0000514,8.70e-07,43 | |||
|ontology_enrichment_development_v019=CL:0005022;3.06e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.56e-18!84;UBERON:0002049!1.12e-17!79;UBERON:0007798!1.12e-17!79;UBERON:0001009!1.18e-17!113;UBERON:0004535!1.07e-16!110;UBERON:0000055!2.87e-16!69;UBERON:0001981!1.51e-12!60;UBERON:0007500!1.51e-12!60;UBERON:0004537!1.51e-12!60;UBERON:0006965!1.51e-12!60;UBERON:0003914!2.32e-12!118;UBERON:0001013!2.82e-11!14;UBERON:0004290!7.22e-11!70;UBERON:0000914!1.26e-10!83;UBERON:0002329!1.26e-10!83;UBERON:0003077!1.26e-10!83;UBERON:0003059!1.26e-10!83;UBERON:0007282!1.26e-10!83;UBERON:0009618!1.26e-10!83;UBERON:0007285!1.26e-10!83;UBERON:0002385!2.67e-10!63;UBERON:0001015!2.67e-10!63;UBERON:0000383!2.67e-10!63;UBERON:0007100!3.23e-10!27;UBERON:0001134!5.38e-10!61;UBERON:0002036!5.38e-10!61;UBERON:0003082!5.38e-10!61;UBERON:0000477!1.43e-09!286;UBERON:0000948!3.06e-09!24;UBERON:0005498!3.06e-09!24;UBERON:0004140!3.06e-09!24;UBERON:0009881!3.06e-09!24;UBERON:0004141!3.06e-09!24;UBERON:0003084!3.06e-09!24;UBERON:0007005!3.06e-09!24;UBERON:0004139!3.06e-09!24;UBERON:0004291!3.06e-09!24;UBERON:0000119!9.04e-09!312;UBERON:0004111!9.98e-09!241;UBERON:0000025!2.04e-08!194;UBERON:0000486!2.38e-08!82;UBERON:0000490!3.04e-08!138;UBERON:0000483!3.26e-08!309;UBERON:0005256!1.05e-07!143;UBERON:0001637!4.46e-07!42;UBERON:0003509!4.46e-07!42;UBERON:0004572!4.46e-07!42;UBERON:0004923!8.32e-07!57;UBERON:0002465!9.32e-07!10;UBERON:0001986!9.52e-07!18;UBERON:0004638!9.52e-07!18;UBERON:0004852!9.52e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.60e-17;14!UBERON:0004457;3.18e-09;9!UBERON:0000042;3.18e-09;9!UBERON:0003688;8.99e-09;6!UBERON:0002358;8.99e-09;6!UBERON:0003684;8.99e-09;6!UBERON:0001178;8.99e-09;6!UBERON:0001473;6.99e-08;8!UBERON:0004536;6.99e-08;8!UBERON:0006558;6.99e-08;8!UBERON:0000948;1.22e-07;22!UBERON:0002072;1.75e-07;5!UBERON:0005284;5.80e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.19e-17,14;UBERON:0004535,1.19e-13,109;UBERON:0001009,6.45e-13,112;UBERON:0002049,1.35e-12,78;UBERON:0007798,1.35e-12,78;UBERON:0000926,2.03e-11,315;UBERON:0004120,2.03e-11,315;UBERON:0006603,2.03e-11,315;UBERON:0004872,3.02e-11,83;UBERON:0000055,1.01e-10,68;UBERON:0007503,2.51e-10,78;UBERON:0003914,8.29e-09,117;UBERON:0003688,1.13e-08,6;UBERON:0002358,1.13e-08,6;UBERON:0003684,1.13e-08,6;UBERON:0001178,1.13e-08,6;UBERON:0000948,4.97e-08,24;UBERON:0005498,4.97e-08,24;UBERON:0004140,4.97e-08,24;UBERON:0009881,4.97e-08,24;UBERON:0004141,4.97e-08,24;UBERON:0003084,4.97e-08,24;UBERON:0007005,4.97e-08,24;UBERON:0004139,4.97e-08,24;UBERON:0004291,4.97e-08,24;UBERON:0001473,6.31e-08,8;UBERON:0004536,6.31e-08,8;UBERON:0006558,6.31e-08,8;UBERON:0002329,6.85e-08,71;UBERON:0003059,6.85e-08,71;UBERON:0007282,6.85e-08,71;UBERON:0004290,6.85e-08,71;UBERON:0009618,6.85e-08,71;UBERON:0003077,1.13e-07,72;UBERON:0007285,1.13e-07,72;UBERON:0002072,1.70e-07,5;UBERON:0007524,1.83e-07,73;UBERON:0005284,4.19e-07,5;UBERON:0001134,4.87e-07,62;UBERON:0002036,4.87e-07,62;UBERON:0003082,4.87e-07,62;UBERON:0007500,6.19e-07,59;UBERON:0001981,6.19e-07,59;UBERON:0004537,6.19e-07,59;UBERON:0006965,6.19e-07,59;UBERON:0000486,6.67e-07,83;UBERON:0002384,8.69e-07,371 | |||
|phase1_expression=12.8991649282095,7.06531728840244,9.44394507443007,2.00146596706261,2.23480547213644,4.36169262050184,5.06599756336621,3.79031924056099,4.44015567939725,0,0,0.655324116390517,0.527533956456907,1.73272894144065,1.98838425436749,0,0.602694528023977,0,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,1.00434111675842,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0.443067789167242,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.2786256184353,0.722878304769133,4.51204119572301,0.289693037921647,0,0,0,0,0.087834785693126,0.916853528483988,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,1.73570250803797,0,4.19499436209906,1.92582629358047,0.835979866147242,4.90991842421725,6.04802646567407,4.68608857870538,2.41697590265488,3.80136052859256,0.976248230192678,2.20597848207521,1.62028389576352,1.42879565254528,2.46982309888787,1.35133776579987,3.06633274931766,0,0.366403487860815,0,0,0,11.4303548889923,1.8994576749687,0.926864265692532,6.02356903572509,3.90135220418193,5.60677600142307,0,2.22000793575444,3.11211035399766,1.75123873690594,1.9615428373615,3.63257826347835,4.60940739583999,0,2.18512053781224,1.1409436430889,0.896692083310806,0,0,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,3.59309070908119,0,0,0,0.877955241761676,0.30648779579902,2.85452311922534,0.453728732640084,0.717558542755448,2.13557388818567,3.17897851739343,0.900273288253207,0.412210116953756,0,0.37223371266318,0.675105328965065,0.292311015483596,0,1.93304787148829,0.323292113637624,1.77504796258307,0.10075209822764,0,0,0,0,0,0,0,0,0,0,3.12899064659632,4.5026865673502,0,4.17931135228781,5.0531563716871,0,0,0,0,0,0,0,0,0,5.90524363699719,5.60967095213783,3.2925920906512,5.88034845542168,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,2.93521735589554,4.47535988059329,4.1668696131895,3.80508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,1.34557301214433,0.43596006883328,0.95339771567235,7.88557466122444,14.3062578340753,4.22651376278,5.05282421511254,1.04007436911366,0.514414748524284,0,0,0.57191197463259,0.542621605391443,0,2.93162565864362,0.710783897485092,0,0,0,0,0,0,0,15.0963658959697,6.89171615004683,0,3.04040744001916,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,1.8403723757871,3.00102312635806,0.813795071099207,3.32753378449291,0.892144943985809,0.473107245101804,0.35142424497814,1.80567659836631,11.3703752027992,0,1.32845119707087,0.737476674166813,0.347534457872331,2.34961388955289,1.02943027143257,0,0,0,0.606255142892519,0,1.81434175997808,10.1724201205699,13.5046536493495,7.85848264412606,20.3741247316565,14.8395102229344,10.1337970320473,2.96836132889982,5.70575867069826,15.4478701022421,10.1837673457123,4.67328986265259,13.0155623875154,0,0,0,0.114814448164607,0.364182336013434,0.917870904715969,0,0,0,0,0,5.68666920354483,5.4429985688485,3.88648648983851,27.7609054842521,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,0,0,0,0.773365746336976,1.23238893691716,0.15350367472613,0.275673144969061,0.429680979473094,0.580066775656914,0.596586391912706,1.4245125703478,0,0,0,0,0.464845549297286,12.277681526395,0.6970372701606,0,1.59691809095107,0,0.18532421910392,0.286249773483982,2.97726695487734,9.8077621662805,4.95638504201945,2.04718233049067,1.28381696410176,2.86382923133343,0,2.87795932133304,3.84351841630477,2.82749765629647,3.43710218674637,0,1.68503382495592,0.975267478179181,0.243713489631284,0,1.36499911407986,1.27264888758341,4.52032466480971,0,0.66343897524122,5.26141062304515,1.15755106853338,1.9676842561399,1.01455188481352,0,0.845086807596724,0.143411352204052,0.687743287091848,0.35667105148125,1.41904425628239,1.68886108238131,6.91519275215794,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,2.14870036263921,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0,2.39097585901284,0.276283915531148,0,0,0.246169610922139,1.55519793830904,0,0,0,1.08507746200627,0,8.89095921157095,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.538651809526579,0,0,0,0,3.19001159731919,1.28236630762607,7.46248686426089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.484945082442097,0,0.677942222341597,0.137041924646751,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0.837847203816763,0.229160424011684,1.43574604915363,0.998395002494955,0.858452096273142,0.89268582976749,0.470284307407084,3.96329871896644,0,0,0,0,0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| ||
|short_description=p3@LRRC32 | |short_description=p3@LRRC32 | ||
}} | }} |
Latest revision as of 08:01, 20 September 2015
Short description: | p3@LRRC32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC32_5end |
Coexpression cluster: | C2167_Mesenchymal_Renal_Preadipocyte_tenocyte_Adipocyte_mesenchymal_Multipotent |
Association with transcript: | 19bp_to_ENST00000407242, ENST00000421973, NM_005512, uc001oxq.3, uc010rsf.1_5end |
EntrezGene: | LRRC32 |
HGNC: | 4161 |
UniProt: | Q14392C9JYU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 4.35e-17 | 12 |
mesodermal cell | 6.16e-14 | 121 |
endothelial cell | 4.85e-13 | 36 |
fibroblast | 7.42e-13 | 76 |
multi fate stem cell | 1.14e-12 | 427 |
somatic stem cell | 4.54e-12 | 433 |
mesenchymal stem cell of adipose | 1.67e-11 | 8 |
stem cell | 2.66e-11 | 441 |
meso-epithelial cell | 3.16e-11 | 45 |
endothelial cell of vascular tree | 7.52e-11 | 24 |
cardiocyte | 2.46e-10 | 16 |
fat cell | 2.14e-09 | 15 |
lymphangioblast | 2.76e-08 | 6 |
endothelial cell of lymphatic vessel | 2.76e-08 | 6 |
vascular lymphangioblast | 2.76e-08 | 6 |
muscle precursor cell | 5.46e-08 | 58 |
myoblast | 5.46e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.46e-08 | 58 |
muscle cell | 2.80e-07 | 55 |
lining cell | 3.59e-07 | 58 |
barrier cell | 3.59e-07 | 58 |
smooth muscle cell | 8.70e-07 | 43 |
smooth muscle myoblast | 8.70e-07 | 43 |