FFCP PHASE1:Hg19::chr7:100770466..100770499,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:100770466..100770499,+
|short_description=p2@SERPINE1
|description=CAGE_peak_2_at_SERPINE1_5end
|association_with_transcript=81bp_to_uc003uxs.2_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5054 | |EntrezGene=5054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8583 | |HGNC=8583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=81bp_to_uc003uxs.2_5end | |||
|cluster_id=chr7:100770466..100770499,+ | |||
|coexpression_cluster_id=C301 | |||
|description=CAGE_peak_2_at_SERPINE1_5end | |||
|id=chr7:100770466..100770499,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.90e-38!180;CL:0000222!2.32e-36!119;CL:0000144!1.29e-27!625;CL:0000220!3.92e-25!246;CL:0002321!5.43e-25!248;CL:0000548!5.49e-24!679;CL:0000004!5.49e-24!679;CL:0000255!5.49e-24!679;CL:0000012!2.35e-23!682;CL:0000183!2.86e-23!59;CL:0002371!4.51e-23!591;CL:0000680!5.72e-23!57;CL:0000056!5.72e-23!57;CL:0000355!5.72e-23!57;CL:0000187!7.85e-22!54;CL:0000192!4.45e-20!42;CL:0000514!4.45e-20!42;CL:0000393!1.62e-19!60;CL:0000211!1.62e-19!60;CL:0000359!7.41e-19!32;CL:0000057!1.60e-18!75;CL:0000213!3.15e-14!57;CL:0000215!3.15e-14!57;CL:0000003!1.49e-12!722;CL:0002139!9.09e-11!24;CL:0000115!9.44e-10!35;CL:0002078!3.30e-09!44;CL:0000048!2.82e-08!430;CL:0000071!4.77e-08!18;CL:0002546!4.77e-08!18;CL:0000723!6.10e-08!436;CL:0002494!9.45e-08!16;CL:0002620!1.67e-07!23;CL:0000034!1.67e-07!444;CL:0002539!3.08e-07!10;CL:0000076!7.86e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.11e-20;32!CL:0000192;3.73e-16;43!CL:0000187;1.31e-13;55!CL:0002139;4.42e-12;24!CL:0000115;1.88e-10;36!CL:0000393;3.88e-10;61!CL:0000211;3.88e-10;61!CL:0000134;6.53e-10;55!CL:0000057;3.04e-09;73!CL:0000213;3.16e-09;58!CL:0000215;3.16e-09;58!CL:0000071;5.52e-09;18!CL:0000723;8.06e-09;61!CL:0002494;1.11e-08;16!CL:0000048;1.26e-08;58!CL:0002620;3.12e-08;23!CL:0002539;4.95e-08;10!CL:1000413;7.18e-07;9!CL:0002078;8.99e-07;45!CL:0002320;9.63e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.90e-40,121;CL:0000680,1.22e-25,58;CL:0000056,1.22e-25,58;CL:0000355,1.22e-25,58;CL:0000187,2.43e-24,55;CL:0002321,6.50e-23,250;CL:0000192,2.86e-22,43;CL:0000514,2.86e-22,43;CL:0000057,2.24e-21,76;CL:0000359,2.76e-21,32;CL:0000393,3.89e-20,61;CL:0000211,3.89e-20,61;CL:0000213,8.35e-16,58;CL:0000215,8.35e-16,58;CL:0000048,1.93e-12,427;CL:0002139,4.65e-12,24;CL:0000723,6.95e-12,433;CL:0000115,7.11e-12,36;CL:0000034,1.47e-10,441;CL:0002078,3.03e-10,45;CL:0000071,5.84e-09,18;CL:0002546,5.84e-09,18;CL:0002494,1.27e-08,16;CL:0002620,2.43e-08,23;CL:0002539,4.89e-08,10;CL:1000413,6.78e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;3.73e-16;43!CL:0000355;9.95e-14;58!CL:0000222;7.98e-11;121!CL:0002546;5.52e-09;18 | |||
|ontology_enrichment_disease=DOID:2394!2.53e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.79e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.34e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.73e-33!79;UBERON:0007798!1.73e-33!79;UBERON:0000055!2.01e-30!69;UBERON:0004872!2.35e-29!84;UBERON:0001981!3.03e-27!60;UBERON:0007500!3.03e-27!60;UBERON:0004537!3.03e-27!60;UBERON:0006965!3.03e-27!60;UBERON:0003914!1.15e-26!118;UBERON:0004535!6.18e-25!110;UBERON:0001637!9.12e-25!42;UBERON:0003509!9.12e-25!42;UBERON:0004572!9.12e-25!42;UBERON:0001009!2.16e-23!113;UBERON:0000486!5.31e-22!82;UBERON:0004290!5.68e-22!70;UBERON:0000490!6.34e-22!138;UBERON:0000914!2.29e-21!83;UBERON:0002329!2.29e-21!83;UBERON:0003077!2.29e-21!83;UBERON:0003059!2.29e-21!83;UBERON:0007282!2.29e-21!83;UBERON:0009618!2.29e-21!83;UBERON:0007285!2.29e-21!83;UBERON:0005256!1.68e-20!143;UBERON:0004573!4.02e-20!33;UBERON:0004571!4.02e-20!33;UBERON:0001134!7.11e-20!61;UBERON:0002036!7.11e-20!61;UBERON:0003082!7.11e-20!61;UBERON:0002385!3.23e-18!63;UBERON:0001015!3.23e-18!63;UBERON:0000383!3.23e-18!63;UBERON:0002100!1.28e-15!216;UBERON:0000119!2.88e-13!312;UBERON:0000483!9.58e-13!309;UBERON:0000947!2.26e-12!21;UBERON:0010191!2.26e-12!21;UBERON:0000468!1.93e-10!659;UBERON:0003104!2.40e-10!238;UBERON:0009142!2.40e-10!238;UBERON:0000926!1.28e-09!448;UBERON:0004120!1.28e-09!448;UBERON:0006603!1.28e-09!448;UBERON:0000475!1.33e-09!365;UBERON:0000477!1.11e-08!286;UBERON:0000467!1.68e-08!625;UBERON:0000487!2.08e-08!22;UBERON:0000480!2.59e-08!626;UBERON:0001986!4.77e-08!18;UBERON:0004638!4.77e-08!18;UBERON:0004852!4.77e-08!18;UBERON:0004111!6.42e-08!241;UBERON:0006914!7.15e-08!25;UBERON:0004237!3.08e-07!10;UBERON:0004695!3.08e-07!10;UBERON:0002111!3.08e-07!10;UBERON:0004178!3.08e-07!10;UBERON:0000025!4.28e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.20e-21;33!UBERON:0004571;9.20e-21;33!UBERON:0001637;1.94e-20;42!UBERON:0003509;1.94e-20;42!UBERON:0004572;1.94e-20;42!UBERON:0007500;5.02e-17;56!UBERON:0001981;5.02e-17;56!UBERON:0004537;5.02e-17;56!UBERON:0000055;2.74e-16;65!UBERON:0002049;4.04e-15;75!UBERON:0007798;4.04e-15;75!UBERON:0000947;7.53e-14;21!UBERON:0010191;7.53e-14;21!UBERON:0003914;8.05e-13;74!UBERON:0000487;1.34e-09;22!UBERON:0004638;5.52e-09;18!UBERON:0001986;5.52e-09;18!UBERON:0004852;5.52e-09;18!UBERON:0006914;3.34e-08;25!UBERON:0004535;4.26e-08;109!UBERON:0004237;4.95e-08;10!UBERON:0004695;4.95e-08;10!UBERON:0002111;4.95e-08;10!UBERON:0004178;4.95e-08;10!UBERON:0001009;1.05e-07;112!UBERON:0002384;6.53e-07;198!UBERON:0000025;6.59e-07;93!UBERON:0003915;7.18e-07;9!UBERON:0004700;7.18e-07;9!UBERON:0001917;7.18e-07;9 | |||
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|phase1_expression=6.90377841228115,5.78071414505655,14.0954404095971,3.00219895059391,3.12872766099101,3.48935409640147,12.6649939084155,18.9515962028049,1.30592814099919,9.33788958705734,6.97801167972428,8.51921351307672,6.33040747748289,2.22779435328084,1.98838425436749,16.1358035148426,19.2862248967673,17.527442169297,15.1259167625057,5.0479633811483,8.97603041474713,4.70182082217132,2.86235987131057,3.14811177667634,4.2684497462233,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.436194716338694,0.755751887377619,1.4555043671269,0.697287110717054,1.23350366406548,0,0,0.256160706529101,0,0,0,0,0.752969358170419,0.545812300115692,0.449446968890169,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,7.31420598941885,2.01210257911091,7.28816602508123,4.69870898099936,8.02140657017423,2.31754430337318,3.1811437882044,0.973269740605272,4.25406677238305,7.31707011626461,3.86473057049755,0.130979075497713,1.09288586487763,0.370784442784429,0,0.174129737299267,0.132957960518865,0.953962497221368,0,0,15.7022301819697,8.60234595106124,12.4970580578734,16.9592382577203,23.0724689915448,9.62913146790236,14.6296476575767,5.16833518338658,11.7402866686614,16.7360306382335,25.3782469778763,3.80136052859256,10.006544359475,13.971197053143,29.9752520716251,2.32179293538607,2.2452937262617,1.23872628531654,10.7321646226118,9.49265659568129,8.24407847686833,0,0,1.74437620857014,26.3395134398519,15.5755529347433,21.8475148341811,22.3732564184075,8.15737279056221,6.16745360156538,21.349799145941,20.4734065186243,4.66816553099649,17.2429660249201,10.1346379930344,4.69208025699287,7.49028701823999,4.68642863667593,9.05264222807929,7.41613368007784,6.72519062483105,3.28816596202542,3.88495066483516,3.65172097425846,3.0623125688234,0.982674538494144,1.75653827998801,3.56400857184616,1.7308685049499,17.2930658768225,24.4330168217521,2.02003336744879,1.12606667884768,4.15596173226274,1.31693286264251,7.04921930337745,1.35214253015937,11.9103792318022,8.9694817844431,7.04739383101272,8.05341224406335,11.1033705551229,4.225153698776,4.3798891807757,6.88632368426882,15.5274225661965,14.225802753535,6.81571190459109,7.36399189138395,1.61646056818812,20.9455659584802,12.0902517873168,5.93462073086707,3.09217365061275,2.45471508531751,0.860413786167011,0.365921118388786,0.530119073285941,0.348581828608555,0.725627385107593,0.252320850875628,0,4.69348596989448,5.14592750554308,5.52539685409922,4.64367928031979,6.49691533502627,0.473227200159376,0.337169380156203,0,0.441175890929576,0.217879444092406,0.474541238222193,0.269662616320329,0,0,4.42893272774789,14.0241773803446,12.7587943512734,10.2906097969879,0,9.82827216677626,0.590789906681404,0,0.122988438543114,3.94605963686609,1.86575485194663,1.1240175325762,0.201057944823262,0.277765335475589,5.2129328849652,2.07986957055916,4.3299402607582,3.24605133930215,14.7934954737135,13.2817131940188,15.7415074276048,12.5567740474835,0.790204397959275,0,0.246217006087397,0,0,0,9.07103492273841,1.55952606966625,1.70161193135412,0.871901815541886,1.15014803749563,0.492663237895943,0,1.24396869324463,0.576479813667846,0.50496973370552,0.063497894292169,0,0,3.4214489204541,0.925447434329912,0.300343057843917,0,6.39147180768556,2.61576041299968,5.06034172164555,16.0296927539644,7.15312891703765,10.988935783228,5.31876233169741,3.12022310734098,3.60090323966999,2.83698264046557,7.45982101245078,10.8663275180192,8.13932408087165,7.40916303102692,9.77208552881205,8.88479871856365,6.33561498346743,21.100756394171,20.9168030064071,16.5955165362215,0,0,0,13.4189919075286,2.29723871668228,7.13184525203592,12.1616297600767,4.31500277355805,11.8180235738331,1.00876629594175,0,0,0.128343036279748,1.01637849688985,0,0.773288812777695,1.34013012267479,0.637938751653163,0,0,0,2.20844685094452,2.00068208423871,3.52644530809656,3.95144636908534,8.56459146226377,4.25796520591624,3.98280810975225,11.736897889381,11.3703752027992,2.0694614258501,5.97803038681893,3.87175253937577,4.25729710893606,6.2656370388077,3.43143423810856,0.206768026122887,0,0.106727557803444,1.81876542867756,9.98612637062982,2.72151263996712,11.6610669674825,6.75232682467475,5.61320188866147,16.5299502539854,8.69902323413396,14.7985607452119,4.45254199334973,4.1636617326717,9.76589489222199,4.59912073677331,7.78881643775432,4.53220475993841,0,18.2460887975989,0.368323955743585,7.11849578620562,4.00600569614778,1.44236856455367,1.80479845162965,1.46329140498388,4.70609861506113,0,1.37217117560738,1.13733384070897,10.0355286113144,7.1252252313706,21.5918153766405,7.58650025122788,7.02365683396795,0.764628819135115,0,3.1342465661105,0,0,0.256450125116389,3.60816110269676,4.22991913063594,2.7821073144885,0,0.082509499920588,4.59412430396938,0.650060246036521,46.5983396548063,2.61010939388729,2.92692372517824,4.1445992176055,8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| ||
|short_description=p2@SERPINE1 | |||
}} | }} |
Latest revision as of 15:37, 24 September 2015
Short description: | p2@SERPINE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SERPINE1_5end |
Coexpression cluster: | C301_Smooth_mesenchymal_Endothelial_Hepatic_basal_hepatic_chorionic |
Association with transcript: | 81bp_to_uc003uxs.2_5end |
EntrezGene: | SERPINE1 |
HGNC: | 8583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.90e-40 | 121 |
muscle precursor cell | 1.22e-25 | 58 |
myoblast | 1.22e-25 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-25 | 58 |
muscle cell | 2.43e-24 | 55 |
embryonic cell | 6.50e-23 | 250 |
smooth muscle cell | 2.86e-22 | 43 |
smooth muscle myoblast | 2.86e-22 | 43 |
fibroblast | 2.24e-21 | 76 |
vascular associated smooth muscle cell | 2.76e-21 | 32 |
electrically responsive cell | 3.89e-20 | 61 |
electrically active cell | 3.89e-20 | 61 |
lining cell | 8.35e-16 | 58 |
barrier cell | 8.35e-16 | 58 |
multi fate stem cell | 1.93e-12 | 427 |
endothelial cell of vascular tree | 4.65e-12 | 24 |
somatic stem cell | 6.95e-12 | 433 |
endothelial cell | 7.11e-12 | 36 |
stem cell | 1.47e-10 | 441 |
meso-epithelial cell | 3.03e-10 | 45 |
blood vessel endothelial cell | 5.84e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.84e-09 | 18 |
cardiocyte | 1.27e-08 | 16 |
skin fibroblast | 2.43e-08 | 23 |
aortic smooth muscle cell | 4.89e-08 | 10 |
endothelial cell of artery | 6.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.34e-08 | 14 |