FFCP PHASE1:Hg19::chr7:100771827..100771882,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100771827..100771882,+ to FFCP PHASE1:Hg19::chr7:100771827..100771882,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5054 | |EntrezGene=5054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8583 | |HGNC=8583 | ||
|TSSclassifier=strong | |||
|UniProt=P05121 | |UniProt=P05121 | ||
|association_with_transcript=95bp_to_M14083_5end | |||
|cluster_id=chr7:100771827..100771882,+ | |||
|coexpression_cluster_id=C301 | |||
|description=CAGE_peak_4_at_SERPINE1_5end | |||
|id=chr7:100771827..100771882,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.49e-36!180;CL:0000222!1.03e-34!119;CL:0000144!6.25e-29!625;CL:0002371!6.69e-28!591;CL:0000680!8.11e-25!57;CL:0000056!8.11e-25!57;CL:0000355!8.11e-25!57;CL:0000183!1.81e-24!59;CL:0000220!1.06e-23!246;CL:0000187!2.42e-23!54;CL:0002321!5.58e-23!248;CL:0000548!9.16e-23!679;CL:0000004!9.16e-23!679;CL:0000255!9.16e-23!679;CL:0000012!5.17e-22!682;CL:0000192!5.56e-22!42;CL:0000514!5.56e-22!42;CL:0000393!9.73e-21!60;CL:0000211!9.73e-21!60;CL:0000359!5.71e-20!32;CL:0000057!4.29e-17!75;CL:0000003!3.05e-13!722;CL:0000213!6.52e-12!57;CL:0000215!6.52e-12!57;CL:0002139!3.04e-11!24;CL:0000048!7.72e-11!430;CL:0000723!1.28e-10!436;CL:0000115!1.81e-10!35;CL:0000034!1.38e-09!444;CL:0002078!3.25e-09!44;CL:0000071!2.91e-08!18;CL:0002546!2.91e-08!18;CL:0002494!3.52e-08!16;CL:0002539!5.68e-08!10;CL:0002620!1.63e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.47e-22;32!CL:0000192;2.48e-17;43!CL:0000187;1.11e-14;55!CL:0002139;4.91e-14;24!CL:0000115;1.02e-11;36!CL:0000071;3.29e-10;18!CL:0000393;5.70e-10;61!CL:0000211;5.70e-10;61!CL:0002539;9.25e-10;10!CL:0000134;1.38e-09;55!CL:0002494;2.74e-09;16!CL:0000723;7.61e-09;61!CL:0000213;1.41e-08;58!CL:0000215;1.41e-08;58!CL:0000048;4.52e-08;58!CL:1000413;6.72e-08;9!CL:0002620;3.34e-07;23!CL:0002078;4.29e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.89e-38,121;CL:0000680,1.32e-26,58;CL:0000056,1.32e-26,58;CL:0000355,1.32e-26,58;CL:0000187,9.13e-25,55;CL:0000359,4.76e-24,32;CL:0000192,7.18e-24,43;CL:0000514,7.18e-24,43;CL:0000393,2.77e-21,61;CL:0000211,2.77e-21,61;CL:0002321,7.64e-19,250;CL:0000057,2.68e-15,76;CL:0002139,3.35e-14,24;CL:0000213,4.66e-14,58;CL:0000215,4.66e-14,58;CL:0000115,1.89e-13,36;CL:0000048,4.15e-13,427;CL:0000723,1.48e-12,433;CL:0000034,1.84e-11,441;CL:0002078,8.44e-11,45;CL:0000071,2.19e-10,18;CL:0002546,2.19e-10,18;CL:0002539,9.39e-10,10;CL:0002494,3.48e-09,16;CL:1000413,5.46e-08,9;CL:0002620,4.19e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;2.48e-17;43!CL:0000355;5.06e-14;58!CL:0002546;3.29e-10;18!CL:0000222;3.89e-10;121 | |||
|ontology_enrichment_disease=DOID:2394!7.40e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.76e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.76e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.78e-33!79;UBERON:0007798!1.78e-33!79;UBERON:0000055!9.66e-32!69;UBERON:0004872!9.23e-31!84;UBERON:0001981!3.12e-28!60;UBERON:0007500!3.12e-28!60;UBERON:0004537!3.12e-28!60;UBERON:0006965!3.12e-28!60;UBERON:0003914!4.49e-28!118;UBERON:0001637!3.11e-26!42;UBERON:0003509!3.11e-26!42;UBERON:0004572!3.11e-26!42;UBERON:0004535!1.70e-25!110;UBERON:0000486!2.44e-24!82;UBERON:0001009!2.64e-24!113;UBERON:0004290!5.34e-24!70;UBERON:0000490!7.73e-24!138;UBERON:0000914!8.23e-24!83;UBERON:0002329!8.23e-24!83;UBERON:0003077!8.23e-24!83;UBERON:0003059!8.23e-24!83;UBERON:0007282!8.23e-24!83;UBERON:0009618!8.23e-24!83;UBERON:0007285!8.23e-24!83;UBERON:0005256!4.76e-22!143;UBERON:0001134!7.40e-22!61;UBERON:0002036!7.40e-22!61;UBERON:0003082!7.40e-22!61;UBERON:0004573!1.13e-20!33;UBERON:0004571!1.13e-20!33;UBERON:0002385!2.93e-20!63;UBERON:0001015!2.93e-20!63;UBERON:0000383!2.93e-20!63;UBERON:0002100!2.88e-18!216;UBERON:0000119!1.69e-13!312;UBERON:0000483!5.22e-13!309;UBERON:0000947!6.92e-13!21;UBERON:0010191!6.92e-13!21;UBERON:0003104!2.12e-10!238;UBERON:0009142!2.12e-10!238;UBERON:0000926!2.92e-10!448;UBERON:0004120!2.92e-10!448;UBERON:0006603!2.92e-10!448;UBERON:0000475!1.75e-09!365;UBERON:0000468!1.88e-09!659;UBERON:0004111!2.68e-09!241;UBERON:0000467!2.96e-09!625;UBERON:0000480!4.32e-09!626;UBERON:0000477!7.18e-09!286;UBERON:0000487!1.84e-08!22;UBERON:0001986!2.91e-08!18;UBERON:0004638!2.91e-08!18;UBERON:0004852!2.91e-08!18;UBERON:0004237!5.68e-08!10;UBERON:0004695!5.68e-08!10;UBERON:0002111!5.68e-08!10;UBERON:0004178!5.68e-08!10;UBERON:0000025!6.46e-08!194;UBERON:0006914!8.06e-08!25;UBERON:0003081!9.66e-08!216;UBERON:0000948!7.60e-07!24;UBERON:0005498!7.60e-07!24;UBERON:0004140!7.60e-07!24;UBERON:0009881!7.60e-07!24;UBERON:0004141!7.60e-07!24;UBERON:0003084!7.60e-07!24;UBERON:0007005!7.60e-07!24;UBERON:0004139!7.60e-07!24;UBERON:0004291!7.60e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.38e-24;42!UBERON:0003509;9.38e-24;42!UBERON:0004572;9.38e-24;42!UBERON:0004573;1.10e-23;33!UBERON:0004571;1.10e-23;33!UBERON:0007500;6.02e-20;56!UBERON:0001981;6.02e-20;56!UBERON:0004537;6.02e-20;56!UBERON:0000055;1.35e-18;65!UBERON:0002049;1.63e-16;75!UBERON:0007798;1.63e-16;75!UBERON:0000947;5.45e-16;21!UBERON:0010191;5.45e-16;21!UBERON:0003914;6.28e-14;74!UBERON:0004638;3.29e-10;18!UBERON:0001986;3.29e-10;18!UBERON:0004852;3.29e-10;18!UBERON:0000487;7.13e-10;22!UBERON:0004237;9.25e-10;10!UBERON:0004695;9.25e-10;10!UBERON:0002111;9.25e-10;10!UBERON:0004178;9.25e-10;10!UBERON:0006914;1.09e-08;25!UBERON:0002385;1.30e-08;31!UBERON:0001015;1.30e-08;31!UBERON:0000383;1.30e-08;31!UBERON:0001135;1.58e-08;15!UBERON:0004535;1.62e-08;109!UBERON:0001009;2.11e-08;112!UBERON:0003915;6.72e-08;9!UBERON:0004700;6.72e-08;9!UBERON:0001917;6.72e-08;9!UBERON:0000025;3.01e-07;93!UBERON:0001473;5.94e-07;8!UBERON:0004536;5.94e-07;8!UBERON:0006558;5.94e-07;8!UBERON:0000948;5.98e-07;22!UBERON:0000490;8.79e-07;33 | |||
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|phase1_expression=2.90685406832891,4.28201047781966,3.94672331468719,4.00293193412522,4.46961094427288,9.59572376510406,0,1.26343974685366,0,5.89761447603621,13.2582221914761,1.96597234917155,1.58260186937072,0.247532705920093,0.331397375727916,34.2885824690405,25.313170177007,21.1789926212338,24.8845727383159,0.61560529038394,2.65200898617529,0.313454721478088,0.286235987131057,1.64249310087461,4.14290710662849,0.0764134057479513,0,0,0,0,0.309632246632152,0.919421224478927,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0.575384784644301,0.256160706529101,0,0,0,0,0,1.09162460023138,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,2.04580098949649,1.0843174571537,2.00535164254356,0.724232594804119,1.5905718941022,1.45990461090791,1.22895262313288,5.76496433402666,2.3715392137144,0,0,0,0,0,0.132957960518865,0,0,0,3.7764857399674,6.881876760849,5.9013885273291,10.1755429546322,8.80948816040802,14.8563742647636,16.510602356408,3.35941786920128,3.5576626268671,6.6944122552934,10.0707329277287,6.0821768457481,3.1728067481262,6.25027236587977,44.5578071334968,1.87529429396568,2.69435247151404,1.35133776579987,0,4.74632829784064,5.86245580577303,0,0,1.3082821564276,19.3819061161174,7.97772223486853,8.60659675285922,4.87622255272983,2.12801029319014,5.60677600142307,8.5399196583764,9.62003438826924,1.24484414159907,16.0305699762929,10.4615617992614,0.454072282934794,2.30470369792,0.234321431833797,2.80944069147288,3.4228309292667,4.78235777765763,5.16711794032565,3.72307772046703,4.77532742787645,0.61246251376468,1.10550885580591,1.23990937410919,0,0.741800787835671,10.9219363432563,11.4978902690598,0.505008341862199,0.750711119231785,1.38532057742091,0,6.12975591598039,0.751190294532984,9.52830338544177,2.87023417102179,1.06778694409284,5.51022943014861,3.00091096084402,1.33968288009971,2.57640540045629,0.744467425326359,7.42615861861571,2.92311015483596,1.51460264546469,2.02509777013059,0.969876340912871,6.03516307278244,3.52632343796741,2.03472710772585,1.73934767846967,2.18196896472668,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0,0,1.56449532329816,0,4.14404764057442,1.85747171212792,2.88751792667834,0.118306800039844,0,0,0.220587945464788,0,0,0,0,0,0.738155454624648,21.0362660705169,2.8810180793198,5.88034845542168,0,0,0,0,0,1.20097467208968,1.09750285408626,0,0.502644862058154,0.925884451585296,0.651616610620649,1.03993478527958,12.9898207822746,0.231860809950154,3.40485213283883,16.6021414925235,11.1116523018387,13.6982989608911,0,0,0,0,0,0.93733833986777,4.36753533317035,0.708875486211932,0.358234090811393,0.290633938513962,0,0.492663237895943,0,0,0.144119953416961,0,0,0,0,0,1.02827492703324,0,0,1.90622843387113,0.43596006883328,3.0802080044799,3.49033632546,0,11.834238535784,1.59562869950922,1.04007436911366,2.05765899409714,2.83698264046557,3.46348832720929,5.43316375900961,1.08524321078289,4.11620168390384,4.56030658011229,4.97548728239564,11.8792780940014,9.04318131178758,14.816068796205,14.3961107302162,0,0,0,3.35474797688216,0,1.42636905040718,13.8990054400876,4.10952645100767,4.47652408099739,0.224170287987055,0,0,0,0.254094624222463,0,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0,0.500170521059677,1.08506009479894,3.32753378449291,14.4527480925701,1.73472656537328,2.10854546986884,2.10662269809403,4.5481500811197,1.03473071292505,0.664225598535437,1.47495334833363,1.21637060255316,1.17480694477644,0.686286847621712,0,0,0,0.303127571446259,4.99306318531491,0.907170879989041,4.71404834855676,2.14846762603287,5.3325417942284,4.22859192543813,1.53512174720011,12.5466058492014,5.93672265779964,4.31787142647436,3.72879623157567,0.574890092096664,5.71179872101983,2.78904908303902,0.120859449591622,15.4389982133529,0.184161977871793,1.7222167224691,1.27463817604702,0.131124414959424,0.451199612907412,1.46329140498388,0,4.38417673959782,0.633309773357254,2.27466768141793,10.0355286113144,9.06846847628985,18.5072703228347,2.16757150035082,2.50844886927427,0.254876273045038,0,0.895499018888713,0,0,0.256450125116389,0.328014645699706,0.976135183992909,0.515205058238611,0.0915694648183434,0,1.14853107599234,1.30012049207304,12.8547143875328,0.386682873168488,3.85121542786611,3.53058451870098,11.7161086611851,1.18162269355101,2.61030049045611,5.11359764496605,0,2.97512847649761,3.0750410778417,1.02090169995667,0.50578890427775,10.2266020845403,26.4442371337738,8.3644472419272,9.24100740528266,7.98459045475533,8.69932992075073,15.5672344047293,21.0393583510727,0.744316738719335,2.84741482246853,8.57835872657212,5.62975140884935,0.855877976067841,3.18203247925937,22.7635105657777,2.33834194858309,2.47083326762449,3.416559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| ||
|short_description=p4@SERPINE1 | |||
}} | }} |
Latest revision as of 15:43, 24 September 2015
Short description: | p4@SERPINE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SERPINE1_5end |
Coexpression cluster: | C301_Smooth_mesenchymal_Endothelial_Hepatic_basal_hepatic_chorionic |
Association with transcript: | 95bp_to_M14083_5end |
EntrezGene: | SERPINE1 |
HGNC: | 8583 |
UniProt: | P05121 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.89e-38 | 121 |
muscle precursor cell | 1.32e-26 | 58 |
myoblast | 1.32e-26 | 58 |
multi-potent skeletal muscle stem cell | 1.32e-26 | 58 |
muscle cell | 9.13e-25 | 55 |
vascular associated smooth muscle cell | 4.76e-24 | 32 |
smooth muscle cell | 7.18e-24 | 43 |
smooth muscle myoblast | 7.18e-24 | 43 |
electrically responsive cell | 2.77e-21 | 61 |
electrically active cell | 2.77e-21 | 61 |
embryonic cell | 7.64e-19 | 250 |
fibroblast | 2.68e-15 | 76 |
endothelial cell of vascular tree | 3.35e-14 | 24 |
lining cell | 4.66e-14 | 58 |
barrier cell | 4.66e-14 | 58 |
endothelial cell | 1.89e-13 | 36 |
multi fate stem cell | 4.15e-13 | 427 |
somatic stem cell | 1.48e-12 | 433 |
stem cell | 1.84e-11 | 441 |
meso-epithelial cell | 8.44e-11 | 45 |
blood vessel endothelial cell | 2.19e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.19e-10 | 18 |
aortic smooth muscle cell | 9.39e-10 | 10 |
cardiocyte | 3.48e-09 | 16 |
endothelial cell of artery | 5.46e-08 | 9 |
skin fibroblast | 4.19e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.76e-10 | 14 |