FFCP PHASE1:Hg19::chr7:99102865..99102894,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:99102865..99102894,+ to FFCP PHASE1:Hg19::chr7:99102865..99102894,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23660 | |EntrezGene=23660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12867 | |HGNC=12867 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBD4 | |UniProt=F8WBD4 | ||
|association_with_transcript=0bp_to_ENST00000454175,uc003uqy.2_5end | |||
|cluster_id=chr7:99102865..99102894,+ | |||
|description=CAGE_peak_1_at_ZKSCAN5_5end | |||
|id=chr7:99102865..99102894,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.21e-18!57;UBERON:0005068!2.21e-18!57;UBERON:0006241!2.21e-18!57;UBERON:0007135!2.21e-18!57;UBERON:0005743!2.71e-18!86;UBERON:0001017!6.47e-18!82;UBERON:0000073!8.53e-17!94;UBERON:0001016!8.53e-17!94;UBERON:0007023!2.49e-16!115;UBERON:0002780!9.89e-16!41;UBERON:0001890!9.89e-16!41;UBERON:0006240!9.89e-16!41;UBERON:0002616!1.10e-15!59;UBERON:0003080!1.20e-15!42;UBERON:0000955!2.14e-15!69;UBERON:0006238!2.14e-15!69;UBERON:0003075!3.36e-13!86;UBERON:0007284!3.36e-13!86;UBERON:0001893!2.04e-12!34;UBERON:0002020!5.36e-12!34;UBERON:0003528!5.36e-12!34;UBERON:0002791!6.44e-12!33;UBERON:0002346!7.42e-12!90;UBERON:0001869!3.04e-11!32;UBERON:0003056!7.51e-11!61;UBERON:0004121!1.31e-09!169;UBERON:0002619!6.21e-09!22;UBERON:0000924!6.80e-09!173;UBERON:0006601!6.80e-09!173;UBERON:0000956!1.26e-08!25;UBERON:0000203!1.26e-08!25;UBERON:0000153!1.64e-08!129;UBERON:0007811!1.64e-08!129;UBERON:0001950!2.47e-08!20;UBERON:0000033!1.26e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.52e-11;41!UBERON:0001890;1.52e-11;41!UBERON:0000073;1.08e-10;53!UBERON:0002616;1.08e-10;53!UBERON:0001893;1.68e-10;34!UBERON:0003528;3.92e-10;34!UBERON:0002020;3.92e-10;34!UBERON:0002791;4.31e-10;32!UBERON:0001869;5.71e-10;32!UBERON:0002619;7.37e-09;22!UBERON:0000956;2.34e-08;25!UBERON:0000203;2.34e-08;25!UBERON:0001950;2.54e-08;20!UBERON:0000955;1.19e-07;68!UBERON:0001017;5.65e-07;75!UBERON:0001016;7.83e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.95e-18,56;UBERON:0005068,1.95e-18,56;UBERON:0006241,1.95e-18,56;UBERON:0007135,1.95e-18,56;UBERON:0000073,3.85e-18,53;UBERON:0002616,3.85e-18,53;UBERON:0001017,6.54e-18,81;UBERON:0001016,2.33e-16,89;UBERON:0007023,6.16e-16,114;UBERON:0002780,9.87e-16,41;UBERON:0001890,9.87e-16,41;UBERON:0003080,9.87e-16,41;UBERON:0006240,9.87e-16,41;UBERON:0000955,2.14e-15,68;UBERON:0006238,2.14e-15,68;UBERON:0001893,2.04e-12,34;UBERON:0003528,5.35e-12,34;UBERON:0002020,5.35e-12,34;UBERON:0002791,2.51e-11,32;UBERON:0001869,3.04e-11,32;UBERON:0003075,1.20e-10,82;UBERON:0007284,1.20e-10,82;UBERON:0003056,3.63e-10,61;UBERON:0002346,1.79e-09,86;UBERON:0002619,6.20e-09,22;UBERON:0000956,1.26e-08,25;UBERON:0000203,1.26e-08,25;UBERON:0010371,1.63e-08,104;UBERON:0001950,2.47e-08,20;UBERON:0004121,1.52e-07,171;UBERON:0000924,1.52e-07,171;UBERON:0006601,1.52e-07,171 | |||
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| ||
|short_description=p1@ZKSCAN5 | |||
}} | }} |
Latest revision as of 16:00, 24 September 2015
Short description: | p1@ZKSCAN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZKSCAN5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000454175, uc003uqy.2_5end |
EntrezGene: | ZKSCAN5 |
HGNC: | 12867 |
UniProt: | F8WBD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.95e-18 | 56 |
neural rod | 1.95e-18 | 56 |
future spinal cord | 1.95e-18 | 56 |
neural keel | 1.95e-18 | 56 |
regional part of nervous system | 3.85e-18 | 53 |
regional part of brain | 3.85e-18 | 53 |
central nervous system | 6.54e-18 | 81 |
nervous system | 2.33e-16 | 89 |
adult organism | 6.16e-16 | 114 |
regional part of forebrain | 9.87e-16 | 41 |
forebrain | 9.87e-16 | 41 |
anterior neural tube | 9.87e-16 | 41 |
future forebrain | 9.87e-16 | 41 |
brain | 2.14e-15 | 68 |
future brain | 2.14e-15 | 68 |
telencephalon | 2.04e-12 | 34 |
brain grey matter | 5.35e-12 | 34 |
gray matter | 5.35e-12 | 34 |
regional part of telencephalon | 2.51e-11 | 32 |
cerebral hemisphere | 3.04e-11 | 32 |
neural plate | 1.20e-10 | 82 |
presumptive neural plate | 1.20e-10 | 82 |
pre-chordal neural plate | 3.63e-10 | 61 |
neurectoderm | 1.79e-09 | 86 |
regional part of cerebral cortex | 6.20e-09 | 22 |
cerebral cortex | 1.26e-08 | 25 |
pallium | 1.26e-08 | 25 |
ecto-epithelium | 1.63e-08 | 104 |
neocortex | 2.47e-08 | 20 |
ectoderm-derived structure | 1.52e-07 | 171 |
ectoderm | 1.52e-07 | 171 |
presumptive ectoderm | 1.52e-07 | 171 |