FFCP PHASE1:Hg19::chr3:129407511..129407529,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |EntrezGene=23023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29116 | |HGNC=29116 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_uc003emy.3_5end | |association_with_transcript=-11bp_to_uc003emy.3_5end | ||
|cluster_id=chr3:129407511..129407529,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_9_at_TMCC1_5end | |description=CAGE_peak_9_at_TMCC1_5end | ||
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|ontology_enrichment_celltype=CL:0002322!2.29e-07!5;CL:0000128!4.46e-07!7;CL:0000126!4.46e-07!7;CL:0000127!4.46e-07!7;CL:0002453!4.46e-07!7 | |ontology_enrichment_celltype=CL:0002322!2.29e-07!5;CL:0000128!4.46e-07!7;CL:0000126!4.46e-07!7;CL:0000127!4.46e-07!7;CL:0002453!4.46e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000540;6.95e-10;6!CL:0000404;6.95e-10;6 | |ontology_enrichment_celltype_v019=CL:0000540;6.95e-10;6!CL:0000404;6.95e-10;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.63e-11,8;CL:0000540,6.66e-10,6;CL:0000031,6.66e-10,6;CL:0000404,6.66e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.76e-14;82!UBERON:0006215;4.52e-13;3!CL:0000031;6.95e-10;6 | |ontology_enrichment_development_v019=UBERON:0006601;5.76e-14;82!UBERON:0006215;4.52e-13;3!CL:0000031;6.95e-10;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.58e-62!57;UBERON:0005068!6.58e-62!57;UBERON:0006241!6.58e-62!57;UBERON:0007135!6.58e-62!57;UBERON:0001017!5.45e-61!82;UBERON:0005743!1.74e-59!86;UBERON:0000073!5.04e-58!94;UBERON:0001016!5.04e-58!94;UBERON:0002616!1.48e-53!59;UBERON:0000955!4.52e-52!69;UBERON:0006238!4.52e-52!69;UBERON:0007023!1.31e-47!115;UBERON:0002780!5.86e-46!41;UBERON:0001890!5.86e-46!41;UBERON:0006240!5.86e-46!41;UBERON:0003080!1.35e-44!42;UBERON:0003075!1.49e-44!86;UBERON:0007284!1.49e-44!86;UBERON:0002346!8.30e-42!90;UBERON:0001893!6.62e-35!34;UBERON:0002020!6.99e-35!34;UBERON:0003528!6.99e-35!34;UBERON:0002791!2.17e-33!33;UBERON:0004121!1.16e-32!169;UBERON:0001869!9.97e-32!32;UBERON:0000924!2.00e-31!173;UBERON:0006601!2.00e-31!173;UBERON:0000033!6.20e-31!123;UBERON:0003056!1.15e-30!61;UBERON:0000153!6.30e-30!129;UBERON:0007811!6.30e-30!129;UBERON:0000956!3.89e-24!25;UBERON:0000203!3.89e-24!25;UBERON:0002619!1.13e-20!22;UBERON:0001950!2.52e-20!20;UBERON:0003076!9.53e-18!15;UBERON:0003057!9.53e-18!15;UBERON:0000025!1.68e-17!194;UBERON:0004111!1.15e-13!241;UBERON:0004733!1.34e-13!12;UBERON:0002028!1.34e-13!12;UBERON:0007277!1.34e-13!12;UBERON:0001894!9.15e-13!7;UBERON:0006222!9.15e-13!7;UBERON:0004732!2.40e-12!13;UBERON:0002308!2.95e-12!9;UBERON:0000125!2.95e-12!9;UBERON:0002680!6.75e-12!9;UBERON:0001895!6.75e-12!9;UBERON:0010092!6.75e-12!9;UBERON:0000200!1.19e-10!6;UBERON:0000475!1.56e-10!365;UBERON:0000477!2.40e-10!286;UBERON:0002420!2.05e-09!9;UBERON:0007245!2.05e-09!9;UBERON:0010009!2.05e-09!9;UBERON:0010011!2.05e-09!9;UBERON:0000454!2.05e-09!9;UBERON:0009663!3.74e-09!7;UBERON:0000483!6.40e-09!309;UBERON:0000119!1.14e-08!312;UBERON:0002298!3.32e-08!8;UBERON:0003296!5.25e-08!4;UBERON:0010133!5.25e-08!4;UBERON:0000064!6.39e-08!219;UBERON:0001871!1.27e-07!7;UBERON:0002037!2.81e-07!6;UBERON:0006215!2.81e-07!6 | |ontology_enrichment_uberon=UBERON:0001049!6.58e-62!57;UBERON:0005068!6.58e-62!57;UBERON:0006241!6.58e-62!57;UBERON:0007135!6.58e-62!57;UBERON:0001017!5.45e-61!82;UBERON:0005743!1.74e-59!86;UBERON:0000073!5.04e-58!94;UBERON:0001016!5.04e-58!94;UBERON:0002616!1.48e-53!59;UBERON:0000955!4.52e-52!69;UBERON:0006238!4.52e-52!69;UBERON:0007023!1.31e-47!115;UBERON:0002780!5.86e-46!41;UBERON:0001890!5.86e-46!41;UBERON:0006240!5.86e-46!41;UBERON:0003080!1.35e-44!42;UBERON:0003075!1.49e-44!86;UBERON:0007284!1.49e-44!86;UBERON:0002346!8.30e-42!90;UBERON:0001893!6.62e-35!34;UBERON:0002020!6.99e-35!34;UBERON:0003528!6.99e-35!34;UBERON:0002791!2.17e-33!33;UBERON:0004121!1.16e-32!169;UBERON:0001869!9.97e-32!32;UBERON:0000924!2.00e-31!173;UBERON:0006601!2.00e-31!173;UBERON:0000033!6.20e-31!123;UBERON:0003056!1.15e-30!61;UBERON:0000153!6.30e-30!129;UBERON:0007811!6.30e-30!129;UBERON:0000956!3.89e-24!25;UBERON:0000203!3.89e-24!25;UBERON:0002619!1.13e-20!22;UBERON:0001950!2.52e-20!20;UBERON:0003076!9.53e-18!15;UBERON:0003057!9.53e-18!15;UBERON:0000025!1.68e-17!194;UBERON:0004111!1.15e-13!241;UBERON:0004733!1.34e-13!12;UBERON:0002028!1.34e-13!12;UBERON:0007277!1.34e-13!12;UBERON:0001894!9.15e-13!7;UBERON:0006222!9.15e-13!7;UBERON:0004732!2.40e-12!13;UBERON:0002308!2.95e-12!9;UBERON:0000125!2.95e-12!9;UBERON:0002680!6.75e-12!9;UBERON:0001895!6.75e-12!9;UBERON:0010092!6.75e-12!9;UBERON:0000200!1.19e-10!6;UBERON:0000475!1.56e-10!365;UBERON:0000477!2.40e-10!286;UBERON:0002420!2.05e-09!9;UBERON:0007245!2.05e-09!9;UBERON:0010009!2.05e-09!9;UBERON:0010011!2.05e-09!9;UBERON:0000454!2.05e-09!9;UBERON:0009663!3.74e-09!7;UBERON:0000483!6.40e-09!309;UBERON:0000119!1.14e-08!312;UBERON:0002298!3.32e-08!8;UBERON:0003296!5.25e-08!4;UBERON:0010133!5.25e-08!4;UBERON:0000064!6.39e-08!219;UBERON:0001871!1.27e-07!7;UBERON:0002037!2.81e-07!6;UBERON:0006215!2.81e-07!6 | ||
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|short_description=p9@TMCC1 | |short_description=p9@TMCC1 | ||
}} | }} |
Latest revision as of 18:08, 24 September 2015
Short description: | p9@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TMCC1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -11bp_to_uc003emy.3_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.63e-11 | 8 |
neuron | 6.66e-10 | 6 |
neuroblast | 6.66e-10 | 6 |
electrically signaling cell | 6.66e-10 | 6 |