FFCP PHASE1:Hg19::chr11:82782861..82782949,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:82782861..82782949,- to FFCP PHASE1:Hg19::chr11:82782861..82782949,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27314 | |EntrezGene=27314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9770 | |HGNC=9770 | ||
|TSSclassifier=strong | |||
|UniProt=E9PI18,E9PRF7,E9PQ07,A8K5R1,Q15771 | |UniProt=E9PI18,E9PRF7,E9PQ07,A8K5R1,Q15771 | ||
|association_with_transcript=0bp_to_ENST00000524635,ENST00000526205,ENST00000527633,ENST00000533276,ENST00000533486,NM_014488,uc001ozu.2,uc001ozv.2,uc010rst.1_5end | |||
|cluster_id=chr11:82782861..82782949,- | |||
|description=CAGE_peak_1_at_RAB30_5end | |||
|id=chr11:82782861..82782949,- | |||
|ontology_enrichment_celltype=CL:0000542!1.61e-14!53;CL:0000051!1.61e-14!53;CL:0000838!5.45e-14!52;CL:0000945!1.88e-12!24;CL:0000826!1.88e-12!24;CL:0000236!1.10e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.77e-12;24!CL:0000236;2.05e-09;13!CL:0000542;5.41e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.60e-14,53;CL:0000051,1.60e-14,53;CL:0000838,5.42e-14,52;CL:0000945,1.87e-12,24;CL:0000826,1.87e-12,24;CL:0000236,1.09e-09,14 | |||
|ontology_enrichment_development_v019=CL:0000051;5.41e-09;53!UBERON:0006601;5.57e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.38e-27!115;UBERON:0001017!4.14e-24!82;UBERON:0005743!6.82e-24!86;UBERON:0000073!8.59e-24!94;UBERON:0001016!8.59e-24!94;UBERON:0001049!8.69e-22!57;UBERON:0005068!8.69e-22!57;UBERON:0006241!8.69e-22!57;UBERON:0007135!8.69e-22!57;UBERON:0000955!1.44e-20!69;UBERON:0006238!1.44e-20!69;UBERON:0002616!4.80e-20!59;UBERON:0002780!2.08e-17!41;UBERON:0001890!2.08e-17!41;UBERON:0006240!2.08e-17!41;UBERON:0003080!2.62e-17!42;UBERON:0001893!3.61e-15!34;UBERON:0002020!4.46e-15!34;UBERON:0003528!4.46e-15!34;UBERON:0002791!1.30e-14!33;UBERON:0001869!5.93e-14!32;UBERON:0000153!7.98e-14!129;UBERON:0007811!7.98e-14!129;UBERON:0002346!8.15e-14!90;UBERON:0000033!1.39e-13!123;UBERON:0003075!1.65e-13!86;UBERON:0007284!1.65e-13!86;UBERON:0002619!1.18e-11!22;UBERON:0000924!1.87e-11!173;UBERON:0006601!1.87e-11!173;UBERON:0004121!4.32e-11!169;UBERON:0001950!6.30e-11!20;UBERON:0000956!8.62e-11!25;UBERON:0000203!8.62e-11!25;UBERON:0003056!2.98e-10!61;UBERON:0000178!8.76e-07!15;UBERON:0000179!8.76e-07!15;UBERON:0000463!8.76e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.81e-13;34!UBERON:0002780;6.36e-13;41!UBERON:0001890;6.36e-13;41!UBERON:0003528;7.88e-13;34!UBERON:0002020;7.88e-13;34!UBERON:0002791;1.40e-12;32!UBERON:0001869;1.46e-12;32!UBERON:0000073;2.42e-12;53!UBERON:0002616;2.42e-12;53!UBERON:0002619;1.13e-11;22!UBERON:0001950;6.00e-11;20!UBERON:0000956;8.52e-11;25!UBERON:0000203;8.52e-11;25!UBERON:0001017;2.34e-10;75!UBERON:0000955;1.79e-09;68!UBERON:0001016;3.65e-09;83!UBERON:0007023;4.28e-07;114!UBERON:0000178;7.76e-07;15!UBERON:0000179;7.76e-07;15!UBERON:0000463;7.76e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.62e-27,114;UBERON:0001017,3.89e-24,81;UBERON:0001016,6.01e-24,89;UBERON:0001049,7.16e-22,56;UBERON:0005068,7.16e-22,56;UBERON:0006241,7.16e-22,56;UBERON:0007135,7.16e-22,56;UBERON:0000955,1.34e-20,68;UBERON:0006238,1.34e-20,68;UBERON:0000073,2.73e-20,53;UBERON:0002616,2.73e-20,53;UBERON:0002780,2.07e-17,41;UBERON:0001890,2.07e-17,41;UBERON:0003080,2.07e-17,41;UBERON:0006240,2.07e-17,41;UBERON:0011216,2.61e-15,223;UBERON:0001893,3.59e-15,34;UBERON:0003528,4.44e-15,34;UBERON:0002020,4.44e-15,34;UBERON:0002346,6.79e-15,86;UBERON:0003075,1.31e-14,82;UBERON:0007284,1.31e-14,82;UBERON:0002791,5.26e-14,32;UBERON:0001869,5.90e-14,32;UBERON:0004121,2.33e-12,171;UBERON:0000924,2.33e-12,171;UBERON:0006601,2.33e-12,171;UBERON:0002619,1.18e-11,22;UBERON:0001950,6.27e-11,20;UBERON:0000956,8.59e-11,25;UBERON:0000203,8.59e-11,25;UBERON:0003056,1.11e-10,61;UBERON:0010371,1.14e-08,104;UBERON:0010314,4.50e-08,132;UBERON:0000178,8.74e-07,15;UBERON:0000179,8.74e-07,15;UBERON:0000463,8.74e-07,15 | |||
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| ||
|short_description=p1@RAB30 | |||
}} | }} |
Latest revision as of 18:25, 24 September 2015
Short description: | p1@RAB30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB30_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524635, ENST00000526205, ENST00000527633, ENST00000533276, ENST00000533486, NM_014488, uc001ozu.2, uc001ozv.2, uc010rst.1_5end |
EntrezGene: | RAB30 |
HGNC: | 9770 |
UniProt: | E9PI18E9PRF7E9PQ07A8K5R1Q15771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.60e-14 | 53 |
common lymphoid progenitor | 1.60e-14 | 53 |
lymphoid lineage restricted progenitor cell | 5.42e-14 | 52 |
lymphocyte of B lineage | 1.87e-12 | 24 |
pro-B cell | 1.87e-12 | 24 |
B cell | 1.09e-09 | 14 |