FFCP PHASE1:Hg19::chr11:827914..827930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283229 | |EntrezGene=283229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28703 | |HGNC=28703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-299bp_to_uc001lrv.2_5end | |association_with_transcript=-299bp_to_uc001lrv.2_5end | ||
|cluster_id=chr11:827914..827930,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_15_at_EFCAB4A_5end | |description=CAGE_peak_15_at_EFCAB4A_5end | ||
|id=chr11:827914..827930,+ | |id=chr11:827914..827930,+ | ||
|ontology_enrichment_celltype=CL:0000167!3.41e-07!1;CL:0000164!3.41e-07!1;CL:0000502!3.41e-07!1;CL:0000172!3.41e-07!1;CL:0000173!3.41e-07!1;CL:0002351!3.41e-07!1;CL:0000313!5.50e-07!1 | |ontology_enrichment_celltype=CL:0000167!3.41e-07!1;CL:0000164!3.41e-07!1;CL:0000502!3.41e-07!1;CL:0000172!3.41e-07!1;CL:0000173!3.41e-07!1;CL:0002351!3.41e-07!1;CL:0000313!5.50e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002327;2.53e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,2.53e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;6.62e-41;1!UBERON:0006298;2.70e-40;1!UBERON:0008801;2.70e-40;1!UBERON:0006601;6.53e-07;82 | |||
|ontology_enrichment_disease=DOID:4430!3.41e-07!1;DOID:2152!5.50e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.53e-11;4!DOID:1612;2.53e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.53e-11,4;DOID:1612,2.53e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0001829!1.38e-13!2;UBERON:0003127!1.54e-12!2;UBERON:0001044!5.00e-10!6;UBERON:0003293!5.00e-10!6;UBERON:0003294!5.00e-10!6;UBERON:0010047!5.00e-10!6;UBERON:0000167!5.00e-10!6;UBERON:0001736!1.20e-07!1;UBERON:0006298!1.20e-07!1;UBERON:0001831!1.27e-07!1;UBERON:0001567!1.27e-07!1;UBERON:0008801!1.27e-07!1;UBERON:0000466!1.48e-07!126;UBERON:0000998!1.85e-07!1;UBERON:0006868!1.85e-07!1;UBERON:0004921!2.96e-07!129;UBERON:0004185!2.96e-07!129;UBERON:0000077!3.21e-07!130;UBERON:0000464!3.92e-07!104;UBERON:0004911!5.50e-07!1;UBERON:0002530!7.39e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.16e-78;2!UBERON:0001044;2.22e-59;6!UBERON:0003293;2.22e-59;6!UBERON:0003294;2.22e-59;6!UBERON:0010047;2.22e-59;6!UBERON:0003408;2.22e-59;6!UBERON:0000167;2.22e-59;6!UBERON:0001831;2.70e-40;1!UBERON:0001736;2.70e-40;1!UBERON:0001567;2.70e-40;1!UBERON:0001041;4.46e-26;14!UBERON:0004089;6.30e-21;2!UBERON:0002365;7.88e-21;31!UBERON:0002330;7.88e-21;31!UBERON:0000161;1.79e-19;19!UBERON:0000166;1.79e-19;19!UBERON:0000165;1.66e-13;28!UBERON:0001911;2.53e-11;4!UBERON:0004921;4.18e-10;33!UBERON:0002530;1.07e-07;57!UBERON:0002553;1.12e-07;52!UBERON:0007811;6.99e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.16e-78,2;UBERON:0001044,2.22e-59,6;UBERON:0003293,2.22e-59,6;UBERON:0003294,2.22e-59,6;UBERON:0010047,2.22e-59,6;UBERON:0000167,2.22e-59,6;UBERON:0001736,2.21e-40,1;UBERON:0006298,2.21e-40,1;UBERON:0001831,3.30e-40,1;UBERON:0001567,3.30e-40,1;UBERON:0008801,3.30e-40,1;UBERON:0003408,4.37e-36,10;UBERON:0002365,4.62e-21,31;UBERON:0002330,4.62e-21,31;UBERON:0004089,6.96e-21,2;UBERON:0000166,6.04e-17,22;UBERON:0000165,4.54e-13,29;UBERON:0000930,4.54e-13,29;UBERON:0002530,2.01e-11,59;UBERON:0001911,2.53e-11,4;UBERON:0005333,2.53e-11,4;UBERON:0008425,2.53e-11,4;UBERON:0005311,2.53e-11,4;UBERON:0002553,4.78e-11,61;UBERON:0000161,1.09e-10,36;UBERON:0001444,4.65e-08,49;UBERON:0000033,3.84e-07,56 | |||
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|short_description=p15@EFCAB4A | |short_description=p15@EFCAB4A | ||
}} | }} |
Latest revision as of 18:29, 24 September 2015
Short description: | p15@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_EFCAB4A_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -299bp_to_uc001lrv.2_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.16e-78 | 2 |
saliva-secreting gland | 2.22e-59 | 6 |
gland of oral region | 2.22e-59 | 6 |
gland of foregut | 2.22e-59 | 6 |
oral gland | 2.22e-59 | 6 |
oral cavity | 2.22e-59 | 6 |
submandibular gland | 2.21e-40 | 1 |
submandibular gland primordium | 2.21e-40 | 1 |
parotid gland | 3.30e-40 | 1 |
cheek | 3.30e-40 | 1 |
parotid gland primordium | 3.30e-40 | 1 |
gland of gut | 4.37e-36 | 10 |
exocrine gland | 4.62e-21 | 31 |
exocrine system | 4.62e-21 | 31 |
midface | 6.96e-21 | 2 |
oral opening | 6.04e-17 | 22 |
mouth | 4.54e-13 | 29 |
stomodeum | 4.54e-13 | 29 |
gland | 2.01e-11 | 59 |
mammary gland | 2.53e-11 | 4 |
mammary bud | 2.53e-11 | 4 |
mammary ridge | 2.53e-11 | 4 |
mammary placode | 2.53e-11 | 4 |
anatomical cavity | 4.78e-11 | 61 |
orifice | 1.09e-10 | 36 |
subdivision of head | 4.65e-08 | 49 |
head | 3.84e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.53e-11 | 4 |
breast cancer | 2.53e-11 | 4 |