FFCP PHASE1:Hg19::chr17:41623634..41623645,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2118 | |EntrezGene=2118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3493 | |HGNC=3493 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z5J3 | |UniProt=B7Z5J3 | ||
|association_with_transcript=45bp_to_ENST00000545954_5end | |association_with_transcript=45bp_to_ENST00000545954_5end | ||
|cluster_id=chr17:41623634..41623645,- | |||
|description=CAGE_peak_15_at_ETV4_5end | |description=CAGE_peak_15_at_ETV4_5end | ||
|id=chr17:41623634..41623645,- | |id=chr17:41623634..41623645,- | ||
|ontology_enrichment_celltype=CL:0000066!5.39e-15!254;CL:0000223!3.95e-10!59;CL:0002321!1.10e-09!248;CL:0000220!4.39e-09!246;CL:0002076!9.29e-07!43 | |ontology_enrichment_celltype=CL:0000066!5.39e-15!254;CL:0000223!3.95e-10!59;CL:0002321!1.10e-09!248;CL:0000220!4.39e-09!246;CL:0002076!9.29e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.69e-12;12!CL:0000540;5.19e-09;6!CL:0000404;5.19e-09;6!CL:0000039;1.28e-07;7!CL:0000586;1.28e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.15e-12,12;CL:0000540,3.81e-09,6;CL:0000031,3.81e-09,6;CL:0000404,3.81e-09,6;CL:0000066,3.40e-08,253;CL:0000039,8.70e-08,7;CL:0000586,8.70e-08,7;CL:0000047,5.85e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;5.19e-09;6!UBERON:0004161;1.07e-08;11!UBERON:0001041;2.47e-08;30!UBERON:0009497;2.31e-07;13 | |||
|ontology_enrichment_disease=DOID:305!6.27e-12!106;DOID:162!5.75e-11!235;DOID:14566!3.49e-10!239;DOID:0050687!4.12e-10!143 | |ontology_enrichment_disease=DOID:305!6.27e-12!106;DOID:162!5.75e-11!235;DOID:14566!3.49e-10!239;DOID:0050687!4.12e-10!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.66e-08,106;DOID:0060085,9.79e-07,1;DOID:3165,9.79e-07,1;DOID:0060121,9.79e-07,1;DOID:2438,9.79e-07,1;DOID:4418,9.79e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.67e-07!155;UBERON:0001555!1.67e-07!155;UBERON:0007026!1.67e-07!155 | |ontology_enrichment_uberon=UBERON:0001007!1.67e-07!155;UBERON:0001555!1.67e-07!155;UBERON:0007026!1.67e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.44e-07;31!UBERON:0002330;1.44e-07;31!UBERON:0002107;2.29e-07;19!UBERON:0006925;2.29e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.37e-08,31;UBERON:0002330,3.37e-08,31;UBERON:0002107,2.19e-07,19;UBERON:0006925,2.19e-07,19;UBERON:0008836,2.19e-07,19;UBERON:0001048,2.74e-07,160;UBERON:0000473,7.30e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0.56530794192401,0,0.275118041940067,0.835979866147242,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0.949265659568129,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.368502951935304,0.103325781175765,1.18800285728205,0,0.910161361938026,0,0.505008341862199,0.375355559615893,0,0,0,0.150238058906597,0.113432183160021,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,1.35282597214308,0.545492241181669,0.573609190778008,0.365921118388786,0.397589304964456,0.464775771478074,0.310983165046111,0.504641701751257,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0.435758888184812,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.614942192715568,0.343135620597051,0.548751427043128,0,0.402115889646523,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.179117045405697,0,1.91691339582606,0,0,0,0,0,0.253991577168676,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0.448524337381443,0.43596006883328,0.66004457238855,0,0,0,0,0,0,0,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0,0,0.232420756919918,0.725156697549733,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,2.29706215198469,0,0,0,0,0,0.275673144969061,0,0,0.255679882248303,0.178064071293475,0,0.576570202095319,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,1.26377536871694,0.975267478179181,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0.379473173765715,1.04980416073495,0.577332676353072,2.01090682660736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.586164286206121,0.556812347790485,0,0,0,0,1.30998378285754,0,0.970884173996107,0.111443384277478,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.629078458031288,0.179021174675609,0,0,0,0,0,0,1.99613798001194,0,0.0874599999961957,0,1.2517279311405,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.503464760927528,0.189753732724185,0.158936578980379,0.210998064528027,0,0.424059214301822,0,0,0.0884575645033392,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0.586993856796269,0.242780379534093,0,0,0,0,0,0,0,0,0.627865836814451,0,0.284609546029793,0,0.867798691675654,0.293977192243133,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0.176512253383001,0.225980740780532,0.137041924646751,1.39100228192093,0,0.195551382734803,0,0.640358984218058,0.19980960958213,1.58499458869517,1.03082936549324,0,0.288109595976299,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,5.82479747637269,5.59360594381288,3.46146605200899,5.39228350833479,0.984274815147488,1.1007533168552,0,0,2.08979093004525,1.65047323916681,2.9080823662043,0,0,0,0,0,0.367182116944987,0.422401346077626,1.07572403599707,0,0,0,0.25426853765475,0,0,0,0,0.574647645245373,0,0.566560457600628,0,0,0,0,0,1.40963004463334,0.106787412567695,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.785270481251171,0,0,0,0,0.110929051536852,0,0,1.49976489554528,0.303298235083296,0.856396000634902,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0.150257608997218,0,0,0.181848659202559,0.537052785212442,0,0.398095888698616,0.800055529326307,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,1.24415452006595,0,0.646948868380091,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0.0981477185010256,0,0.550285795565037,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0.171488009437418,0.0679697329768317,0,0,0.667388411352415,0,0,0.560544326627578,0.913158720509496,0,0,0,0,0.348724276104376,0.695433089210318,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.98150233615243,0.365753774946808,0,0,0,0,0.233939463462106,1.39265542612958,0,1.01651473835064,0,0,0,0.218559560503957,0,0,0.942706188406504,0,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.788857810965923,0.0679914901909147,0,0,0.371995018166751,0,0,0.252332849670158,1.20192129160065,0.253397002022874,2.03977659483963,1.87052183685892,0.643264296743914,1.50424523575425,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0.684466602170562,0.336760265072938,0,0,0.325613074443898,0.106727345877715,0,0.628776414746108,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0.56530794192401,0,0.275118041940067,0.835979866147242,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0.949265659568129,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.368502951935304,0.103325781175765,1.18800285728205,0,0.910161361938026,0,0.505008341862199,0.375355559615893,0,0,0,0.150238058906597,0.113432183160021,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,1.35282597214308,0.545492241181669,0.573609190778008,0.365921118388786,0.397589304964456,0.464775771478074,0.310983165046111,0.504641701751257,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0.435758888184812,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.614942192715568,0.343135620597051,0.548751427043128,0,0.402115889646523,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.179117045405697,0,1.91691339582606,0,0,0,0,0,0.253991577168676,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0.448524337381443,0.43596006883328,0.66004457238855,0,0,0,0,0,0,0,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0,0,0.232420756919918,0.725156697549733,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,2.29706215198469,0,0,0,0,0,0.275673144969061,0,0,0.255679882248303,0.178064071293475,0,0.576570202095319,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,1.26377536871694,0.975267478179181,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0.379473173765715,1.04980416073495,0.577332676353072,2.01090682660736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.586164286206121,0.556812347790485,0,0,0,0,1.30998378285754,0,0.970884173996107,0.111443384277478,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.629078458031288,0.179021174675609,0,0,0,0,0,0,1.99613798001194,0,0.0874599999961957,0,1.2517279311405,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.503464760927528,0.189753732724185,0.158936578980379,0.210998064528027,0,0.424059214301822,0,0,0.0884575645033392,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0.586993856796269,0.242780379534093,0,0,0,0,0,0,0,0,0.627865836814451,0,0.284609546029793,0,0.867798691675654,0.293977192243133,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0.176512253383001,0.225980740780532,0.137041924646751,1.39100228192093,0,0.195551382734803,0,0.640358984218058,0.19980960958213,1.58499458869517,1.03082936549324,0,0.288109595976299,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,5.82479747637269,5.59360594381288,3.46146605200899,5.39228350833479,0.984274815147488,1.1007533168552,0,0,2.08979093004525,1.65047323916681,2.9080823662043,0,0,0,0,0,0.367182116944987,0.422401346077626,1.07572403599707,0,0,0,0.25426853765475,0,0,0,0,0.574647645245373,0,0.566560457600628,0,0,0,0,0,1.40963004463334,0.106787412567695,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.785270481251171,0,0,0,0,0.110929051536852,0,0,1.49976489554528,0.303298235083296,0.856396000634902,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0.150257608997218,0,0,0.181848659202559,0.537052785212442,0,0.398095888698616,0.800055529326307,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,1.24415452006595,0,0.646948868380091,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0.0981477185010256,0,0.550285795565037,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0.171488009437418,0.0679697329768317,0,0,0.667388411352415,0,0,0.560544326627578,0.913158720509496,0,0,0,0,0.348724276104376,0.695433089210318,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.98150233615243,0.365753774946808,0,0,0,0,0.233939463462106,1.39265542612958,0,1.01651473835064,0,0,0,0.218559560503957,0,0,0.942706188406504,0,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.788857810965923,0.0679914901909147,0,0,0.371995018166751,0,0,0.252332849670158,1.20192129160065,0.253397002022874,2.03977659483963,1.87052183685892,0.643264296743914,1.50424523575425,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0.684466602170562,0.336760265072938,0,0,0.325613074443898,0.106727345877715,0,0.628776414746108,0,0,0,0,0,0 | ||
|short_description=p15@ETV4 | |short_description=p15@ETV4 | ||
}} | }} |
Latest revision as of 18:32, 24 September 2015
Short description: | p15@ETV4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ETV4_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000545954_5end |
EntrezGene: | ETV4 |
HGNC: | 3493 |
UniProt: | B7Z5J3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.15e-12 | 12 |
neuron | 3.81e-09 | 6 |
neuroblast | 3.81e-09 | 6 |
electrically signaling cell | 3.81e-09 | 6 |
epithelial cell | 3.40e-08 | 253 |
germ line cell | 8.70e-08 | 7 |
germ cell | 8.70e-08 | 7 |
neuronal stem cell | 5.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 3.37e-08 | 31 |
exocrine system | 3.37e-08 | 31 |
liver | 2.19e-07 | 19 |
digestive gland | 2.19e-07 | 19 |
liver bud | 2.19e-07 | 19 |
primordium | 2.74e-07 | 160 |
testis | 7.30e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.66e-08 | 106 |
organ system benign neoplasm | 9.79e-07 | 1 |
skin benign neoplasm | 9.79e-07 | 1 |
integumentary system benign neoplasm | 9.79e-07 | 1 |
dermis tumor | 9.79e-07 | 1 |
cutaneous fibrous histiocytoma | 9.79e-07 | 1 |