FFCP PHASE1:Hg19::chr16:15733143..15733164,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:15733143..15733164,-
|short_description=p13@KIAA0430
|description=CAGE_peak_13_at_KIAA0430_5end
|association_with_transcript=0bp_to_uc002ddq.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9665 | |EntrezGene=9665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29562 | |HGNC=29562 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002ddq.2_5end | |||
|cluster_id=chr16:15733143..15733164,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_13_at_KIAA0430_5end | |||
|id=chr16:15733143..15733164,- | |||
|ontology_enrichment_celltype=CL:0000945!1.15e-41!24;CL:0000826!1.15e-41!24;CL:0000236!1.20e-30!14;CL:0000542!6.19e-22!53;CL:0000051!6.19e-22!53;CL:0000838!2.39e-20!52;CL:0002087!5.67e-10!119;CL:0002031!1.43e-07!124;CL:0000738!1.49e-07!140;CL:0000785!4.99e-07!2;CL:0000955!4.99e-07!2;CL:0000818!4.99e-07!2;CL:0000954!4.99e-07!2;CL:0000816!4.99e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.92e-130;13!CL:0000945;3.17e-70;24!CL:0000542;2.79e-27;53!CL:0000785;2.21e-15;1!CL:0000819;2.21e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.94e-121,14;CL:0000945,2.36e-70,24;CL:0000826,2.36e-70,24;CL:0000838,5.41e-32,52;CL:0000542,2.27e-31,53;CL:0000051,2.27e-31,53;CL:0000819,3.66e-15,1;CL:0002087,9.52e-14,115;CL:0002031,3.93e-13,120;CL:0000738,1.85e-11,136;CL:0002032,1.68e-09,161;CL:0000837,1.68e-09,161;CL:0000037,4.69e-09,168;CL:0000988,1.56e-08,177;CL:0000785,3.08e-08,2;CL:0000955,3.08e-08,2;CL:0000818,3.08e-08,2;CL:0000954,3.08e-08,2;CL:0000816,3.08e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.79e-27;53!UBERON:0001045;2.21e-15;1!CL:0000954;2.40e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.58e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.21e-15;1!DOID:8675;2.21e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.66e-15,1;DOID:8675,3.66e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.90e-13!115;UBERON:0002106!1.39e-09!3;UBERON:0004854!1.39e-09!3;UBERON:0009034!1.39e-09!3;UBERON:0002095!1.39e-09!3;UBERON:0004782!1.39e-09!3;UBERON:0003281!1.39e-09!3;UBERON:0009664!1.39e-09!3;UBERON:0002296!1.39e-09!3;UBERON:0005602!1.39e-09!3;UBERON:0001179!1.39e-09!3;UBERON:0006293!1.39e-09!3;UBERON:0006331!1.01e-08!3;UBERON:0000988!1.65e-08!3;UBERON:0002308!1.96e-07!9;UBERON:0000125!1.96e-07!9;UBERON:0000200!2.98e-07!6;UBERON:0002020!3.38e-07!34;UBERON:0003528!3.38e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.21e-15;1!UBERON:0000029;2.21e-15;1!UBERON:0001154;2.21e-15;1!UBERON:0001153;2.21e-15;1!UBERON:0009854;2.21e-15;1!UBERON:0001961;2.21e-15;1!UBERON:0001744;2.21e-15;1!UBERON:0001042;2.21e-15;1!UBERON:0001735;2.21e-15;1!UBERON:0006562;2.40e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.38e-15,1;UBERON:0001961,2.38e-15,1;UBERON:0001744,2.38e-15,1;UBERON:0001735,2.38e-15,1;UBERON:0000029,2.75e-15,1;UBERON:0001154,3.17e-15,1;UBERON:0001153,3.17e-15,1;UBERON:0001045,3.17e-15,1 | |||
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| ||
|short_description=p13@KIAA0430 | |||
}} | }} |
Latest revision as of 18:50, 24 September 2015
Short description: | p13@KIAA0430 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_KIAA0430_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_uc002ddq.2_5end |
EntrezGene: | KIAA0430 |
HGNC: | 29562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.94e-121 | 14 |
lymphocyte of B lineage | 2.36e-70 | 24 |
pro-B cell | 2.36e-70 | 24 |
lymphoid lineage restricted progenitor cell | 5.41e-32 | 52 |
lymphocyte | 2.27e-31 | 53 |
common lymphoid progenitor | 2.27e-31 | 53 |
B-1 B cell | 3.66e-15 | 1 |
nongranular leukocyte | 9.52e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.93e-13 | 120 |
leukocyte | 1.85e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.68e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-09 | 161 |
hematopoietic stem cell | 4.69e-09 | 168 |
hematopoietic cell | 1.56e-08 | 177 |
mature B cell | 3.08e-08 | 2 |
pre-B-II cell | 3.08e-08 | 2 |
transitional stage B cell | 3.08e-08 | 2 |
small pre-B-II cell | 3.08e-08 | 2 |
immature B cell | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.38e-15 | 1 |
mucosa-associated lymphoid tissue | 2.38e-15 | 1 |
lymphoid tissue | 2.38e-15 | 1 |
tonsillar ring | 2.38e-15 | 1 |
lymph node | 2.75e-15 | 1 |
vermiform appendix | 3.17e-15 | 1 |
caecum | 3.17e-15 | 1 |
midgut | 3.17e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.66e-15 | 1 |
lymphosarcoma | 3.66e-15 | 1 |