FFCP PHASE1:Hg19::chr3:130745571..130745677,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25021 | |||
|TSSclassifier=strong | |||
|UniProt=Q2TB18,E7EV77,D6RG30 | |||
|association_with_transcript=0bp_to_ENST00000264992,ENST00000446270,ENST00000514044,NM_014065,uc003env.1,uc010htm.1,uc011blj.1_5end | |||
|cluster_id=chr3:130745571..130745677,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_ASTE1_5end | |||
|id=chr3:130745571..130745677,- | |||
|ontology_enrichment_celltype=CL:0000542!4.74e-21!53;CL:0000051!4.74e-21!53;CL:0000738!1.62e-20!140;CL:0000838!1.65e-20!52;CL:0002031!1.44e-18!124;CL:0000037!6.79e-18!172;CL:0000566!6.79e-18!172;CL:0002087!1.98e-17!119;CL:0000988!2.26e-16!182;CL:0002032!3.03e-16!165;CL:0000837!3.03e-16!165;CL:0000084!1.62e-12!25;CL:0000827!1.62e-12!25;CL:0000791!3.43e-11!18;CL:0000789!3.43e-11!18;CL:0002420!3.43e-11!18;CL:0002419!3.43e-11!18;CL:0000790!3.43e-11!18;CL:0000625!1.61e-08!11;CL:0000945!1.07e-07!24;CL:0000826!1.07e-07!24;CL:0000236!2.15e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.39e-13;53!CL:0000084;2.13e-12;25!CL:0000791;3.56e-11;18!CL:0000789;3.56e-11;18!CL:0002419;3.56e-11;18!CL:0000625;1.38e-08;11!CL:0000236;8.44e-08;13!CL:0000945;9.99e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.39e-21,136;CL:0000542,4.74e-21,53;CL:0000051,4.74e-21,53;CL:0000838,1.65e-20,52;CL:0002031,2.03e-19,120;CL:0000037,1.64e-18,168;CL:0002087,2.89e-18,115;CL:0000988,1.85e-17,177;CL:0002032,7.72e-17,161;CL:0000837,7.72e-17,161;CL:0000084,1.62e-12,25;CL:0000827,1.62e-12,25;CL:0000791,3.43e-11,18;CL:0000789,3.43e-11,18;CL:0002420,3.43e-11,18;CL:0002419,3.43e-11,18;CL:0000790,3.43e-11,18;CL:0000625,1.61e-08,11;CL:0000945,1.07e-07,24;CL:0000826,1.07e-07,24;CL:0000236,2.15e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;4.39e-13;53!CL:0000790;3.56e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.30e-08!115;UBERON:0000178!1.21e-07!15;UBERON:0000179!1.21e-07!15;UBERON:0000463!1.21e-07!15;UBERON:0002390!1.29e-07!102;UBERON:0003061!1.29e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.27e-07;15!UBERON:0000179;1.27e-07;15!UBERON:0000463;1.27e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.94e-08,114;UBERON:0002390,4.39e-08,98;UBERON:0003061,4.39e-08,98;UBERON:0000178,1.21e-07,15;UBERON:0000179,1.21e-07,15;UBERON:0000463,1.21e-07,15;UBERON:0002193,4.23e-07,108 | |||
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| |||
|short_description=p1@ASTE1 | |||
}} |
Latest revision as of 19:33, 24 September 2015
Short description: | p1@ASTE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ASTE1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000264992, ENST00000446270, ENST00000514044, NM_014065, uc003env.1, uc010htm.1, uc011blj.1_5end |
EntrezGene: | ASTE1 |
HGNC: | 25021 |
UniProt: | Q2TB18E7EV77D6RG30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.39e-21 | 136 |
lymphocyte | 4.74e-21 | 53 |
common lymphoid progenitor | 4.74e-21 | 53 |
lymphoid lineage restricted progenitor cell | 1.65e-20 | 52 |
hematopoietic lineage restricted progenitor cell | 2.03e-19 | 120 |
hematopoietic stem cell | 1.64e-18 | 168 |
nongranular leukocyte | 2.89e-18 | 115 |
hematopoietic cell | 1.85e-17 | 177 |
hematopoietic oligopotent progenitor cell | 7.72e-17 | 161 |
hematopoietic multipotent progenitor cell | 7.72e-17 | 161 |
T cell | 1.62e-12 | 25 |
pro-T cell | 1.62e-12 | 25 |
mature alpha-beta T cell | 3.43e-11 | 18 |
alpha-beta T cell | 3.43e-11 | 18 |
immature T cell | 3.43e-11 | 18 |
mature T cell | 3.43e-11 | 18 |
immature alpha-beta T cell | 3.43e-11 | 18 |
CD8-positive, alpha-beta T cell | 1.61e-08 | 11 |
lymphocyte of B lineage | 1.07e-07 | 24 |
pro-B cell | 1.07e-07 | 24 |
B cell | 2.15e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.94e-08 | 114 |
hematopoietic system | 4.39e-08 | 98 |
blood island | 4.39e-08 | 98 |
blood | 1.21e-07 | 15 |
haemolymphatic fluid | 1.21e-07 | 15 |
organism substance | 1.21e-07 | 15 |
hemolymphoid system | 4.23e-07 | 108 |