FFCP PHASE1:Hg19::chr22:40573904..40573915,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23112 | |EntrezGene=23112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29190 | |HGNC=29190 | ||
|TSSclassifier=strong | |||
|UniProt=A8MYY3,Q9UPQ9 | |UniProt=A8MYY3,Q9UPQ9 | ||
|association_with_transcript=-13bp_to_ENST00000400140,ENST00000454349,ENST00000489500,NM_001162501,NM_015088,uc003ayn.3,uc011aor.1_5end | |association_with_transcript=-13bp_to_ENST00000400140,ENST00000454349,ENST00000489500,NM_001162501,NM_015088,uc003ayn.3,uc011aor.1_5end | ||
|cluster_id=chr22:40573904..40573915,+ | |||
|description=CAGE_peak_7_at_TNRC6B_5end | |description=CAGE_peak_7_at_TNRC6B_5end | ||
|id=chr22:40573904..40573915,+ | |id=chr22:40573904..40573915,+ | ||
|ontology_enrichment_celltype=CL:0000764;3.57e-13;2!CL:0000558;3.57e-13;2!CL:0002591;2.00e-07;1 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000764;3.57e-13;2!CL:0000558;3.57e-13;2!CL:0002591;2.00e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.46e-13,2;CL:0000765,8.46e-13,2;CL:0000050,8.46e-13,2;CL:0000038,8.46e-13,2;CL:0000558,8.46e-13,2;CL:0000547,8.46e-13,2;CL:0000549,8.46e-13,2;CL:0000550,8.46e-13,2;CL:0000552,8.46e-13,2;CL:0002591,3.20e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002619;5.56e-57;22!UBERON:0000956;4.68e-50;25!UBERON:0000203;4.68e-50;25!UBERON:0001950;5.84e-47;20!UBERON:0001869;2.30e-34;32!UBERON:0003528;2.91e-34;34!UBERON:0002020;2.91e-34;34!UBERON:0002791;3.38e-34;32!UBERON:0001893;2.67e-28;34!UBERON:0000200;6.16e-26;6!UBERON:0002780;9.62e-25;41!UBERON:0001890;9.62e-25;41!UBERON:0001870;2.55e-19;3!UBERON:0000073;3.71e-17;53!UBERON:0002616;3.71e-17;53!UBERON:0002771;1.28e-13;2!UBERON:0002702;1.28e-13;2!UBERON:0001954;3.57e-13;2!UBERON:0003022;3.57e-13;2!UBERON:0002421;3.57e-13;2!UBERON:0002600;3.57e-13;2!UBERON:0000955;5.79e-12;68!UBERON:0001017;6.33e-12;75!UBERON:0000349;8.28e-12;5!UBERON:0001872;1.51e-11;5!UBERON:0002021;1.51e-11;5!UBERON:0001871;9.40e-09;6!UBERON:0001016;9.75e-09;83!UBERON:0002581;2.00e-07;1!UBERON:0002022;2.00e-07;1!UBERON:0007029;2.00e-07;1!UBERON:0003112;2.00e-07;1!UBERON:0011158;2.00e-07;1!UBERON:0003128;2.00e-07;1!UBERON:0001703;2.00e-07;1!UBERON:0002241;2.00e-07;1 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.83e-16!86;UBERON:0001017!8.79e-16!82;UBERON:0000955!1.03e-15!69;UBERON:0006238!1.03e-15!69;UBERON:0001049!5.23e-15!57;UBERON:0005068!5.23e-15!57;UBERON:0006241!5.23e-15!57;UBERON:0007135!5.23e-15!57;UBERON:0000073!6.19e-14!94;UBERON:0001016!6.19e-14!94;UBERON:0002780!1.43e-13!41;UBERON:0001890!1.43e-13!41;UBERON:0006240!1.43e-13!41;UBERON:0002616!1.63e-13!59;UBERON:0001869!4.09e-13!32;UBERON:0003080!7.28e-13!42;UBERON:0002020!1.04e-12!34;UBERON:0003528!1.04e-12!34;UBERON:0001893!2.69e-12!34;UBERON:0000153!4.72e-12!129;UBERON:0007811!4.72e-12!129;UBERON:0002791!1.11e-11!33;UBERON:0000033!1.56e-11!123;UBERON:0002346!2.22e-11!90;UBERON:0003075!2.61e-11!86;UBERON:0007284!2.61e-11!86;UBERON:0000956!3.24e-11!25;UBERON:0000203!3.24e-11!25;UBERON:0007023!1.60e-10!115;UBERON:0002619!4.08e-10!22;UBERON:0000924!9.94e-10!173;UBERON:0006601!9.94e-10!173;UBERON:0004121!1.49e-09!169;UBERON:0001950!9.49e-09!20;UBERON:0003056!6.03e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.56e-57;22!UBERON:0000956;4.68e-50;25!UBERON:0000203;4.68e-50;25!UBERON:0001950;5.84e-47;20!UBERON:0001869;2.30e-34;32!UBERON:0003528;2.91e-34;34!UBERON:0002020;2.91e-34;34!UBERON:0002791;3.38e-34;32!UBERON:0001893;2.67e-28;34!UBERON:0000200;6.16e-26;6!UBERON:0002780;9.62e-25;41!UBERON:0001890;9.62e-25;41!UBERON:0001870;2.55e-19;3!UBERON:0000073;3.71e-17;53!UBERON:0002616;3.71e-17;53!UBERON:0002771;1.28e-13;2!UBERON:0002702;1.28e-13;2!UBERON:0001954;3.57e-13;2!UBERON:0003022;3.57e-13;2!UBERON:0002421;3.57e-13;2!UBERON:0002600;3.57e-13;2!UBERON:0000955;5.79e-12;68!UBERON:0001017;6.33e-12;75!UBERON:0000349;8.28e-12;5!UBERON:0001872;1.51e-11;5!UBERON:0002021;1.51e-11;5!UBERON:0001871;9.40e-09;6!UBERON:0001016;9.75e-09;83!UBERON:0002581;2.00e-07;1!UBERON:0002022;2.00e-07;1!UBERON:0007029;2.00e-07;1!UBERON:0003112;2.00e-07;1!UBERON:0011158;2.00e-07;1!UBERON:0003128;2.00e-07;1!UBERON:0001703;2.00e-07;1!UBERON:0002241;2.00e-07;1 | |||
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| ||
|short_description=p7@TNRC6B | |short_description=p7@TNRC6B | ||
}} | }} |
Latest revision as of 19:53, 24 September 2015
Short description: | p7@TNRC6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNRC6B_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000400140, ENST00000454349, ENST00000489500, NM_001162501, NM_015088, uc003ayn.3, uc011aor.1_5end |
EntrezGene: | TNRC6B |
HGNC: | 29190 |
UniProt: | A8MYY3Q9UPQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.46e-13 | 2 |
erythroblast | 8.46e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 8.46e-13 | 2 |
erythroid progenitor cell | 8.46e-13 | 2 |
reticulocyte | 8.46e-13 | 2 |
proerythroblast | 8.46e-13 | 2 |
basophilic erythroblast | 8.46e-13 | 2 |
polychromatophilic erythroblast | 8.46e-13 | 2 |
orthochromatic erythroblast | 8.46e-13 | 2 |
smooth muscle cell of the pulmonary artery | 3.20e-07 | 1 |