FFCP PHASE1:Hg19::chr4:1164956..1164968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10417 | |EntrezGene=10417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |HGNC=11253 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-98bp_to_ENST00000509697_5end | |association_with_transcript=-98bp_to_ENST00000509697_5end | ||
|cluster_id=chr4:1164956..1164968,- | |||
|coexpression_cluster_id=C574 | |coexpression_cluster_id=C574 | ||
|description=CAGE_peak_16_at_SPON2_5end | |description=CAGE_peak_16_at_SPON2_5end | ||
|id=chr4:1164956..1164968,- | |id=chr4:1164956..1164968,- | ||
|ontology_enrichment_celltype=CL:0002334!1.16e-13!12;CL:0000048!7.01e-11!430;CL:0000057!1.31e-10!75;CL:0000723!2.15e-10!436;CL:0000034!9.05e-10!444;CL:0000055!2.26e-09!180;CL:0002570!4.75e-07!8;CL:0002371!7.47e-07!591;CL:0002320!9.74e-07!365 | |ontology_enrichment_celltype=CL:0002334!1.16e-13!12;CL:0000048!7.01e-11!430;CL:0000057!1.31e-10!75;CL:0000723!2.15e-10!436;CL:0000034!9.05e-10!444;CL:0000055!2.26e-09!180;CL:0002570!4.75e-07!8;CL:0002371!7.47e-07!591;CL:0002320!9.74e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000134;4.32e-09;55!CL:0002504;7.20e-09;3!CL:1000279;7.20e-09;3!CL:1000280;7.20e-09;3!CL:0002622;7.62e-09;3!CL:0002615;9.23e-09;3!CL:0002569;1.01e-08;6!CL:0000048;7.74e-07;58!CL:0002568;9.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,6.67e-09,3;CL:0002504,6.94e-09,3;CL:1000279,6.94e-09,3;CL:1000280,6.94e-09,3;CL:0002569,8.48e-09,6;CL:0002615,1.06e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004874;9.23e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!1.06e-09!14 | |ontology_enrichment_disease=DOID:2394!1.06e-09!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.20e-10!216;UBERON:0003688!6.50e-10!6;UBERON:0002358!6.50e-10!6;UBERON:0003684!6.50e-10!6;UBERON:0001178!6.50e-10!6;UBERON:0000914!1.93e-09!83;UBERON:0002329!1.93e-09!83;UBERON:0003077!1.93e-09!83;UBERON:0003059!1.93e-09!83;UBERON:0007282!1.93e-09!83;UBERON:0009618!1.93e-09!83;UBERON:0007285!1.93e-09!83;UBERON:0004290!6.06e-09!70;UBERON:0005256!2.00e-08!143;UBERON:0004923!1.44e-07!57 | |ontology_enrichment_uberon=UBERON:0002100!3.20e-10!216;UBERON:0003688!6.50e-10!6;UBERON:0002358!6.50e-10!6;UBERON:0003684!6.50e-10!6;UBERON:0001178!6.50e-10!6;UBERON:0000914!1.93e-09!83;UBERON:0002329!1.93e-09!83;UBERON:0003077!1.93e-09!83;UBERON:0003059!1.93e-09!83;UBERON:0007282!1.93e-09!83;UBERON:0009618!1.93e-09!83;UBERON:0007285!1.93e-09!83;UBERON:0004290!6.06e-09!70;UBERON:0005256!2.00e-08!143;UBERON:0004923!1.44e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003422;1.01e-08;6!UBERON:0003104;1.53e-07;7!UBERON:0009142;1.53e-07;7!UBERON:0000989;9.23e-07;1!UBERON:0008811;9.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,8.48e-09,6;UBERON:0000989,8.02e-07,1;UBERON:0008811,8.02e-07,1;UBERON:0006258,8.02e-07,1;UBERON:0005876,8.02e-07,1;UBERON:0004874,8.02e-07,1 | |||
|phase1_expression=0.54503513781167,2.35510576280081,0.281908808191942,2.00146596706261,3.5756887554183,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0,1.65698687863958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,1.87296046098192,0,0.298897361103602,0.23486899728753,0.647491777472526,0.140450806702248,0,0.122834317311768,0.206651562351531,0,1.23633464639278,0,2.87447256726495,0,0.125118519871964,0,0,0,0.751190294532984,0,0,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,3.60939740834793,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,1.16344544182,0,1.690605505112,0.26593811658487,4.16029747645464,0,0,0,0.428933980974443,1.62786481617433,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0.215627574859517,0.77005821767849,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0.496215615637554,0.153461973288062,1.12264037773229,0.512556597022804,0.511707249066704,0.64341568457443,0,0.462629081407967,0.355123450626254,0.0821271560138091,0.519254429183621,0.697262270759755,0,0,0,0.803701137152247,2.91345868810747,5.50722542829581,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.870100163485371,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,2.2875623270859,0.255897791311334,2.56763392820352,0,0,0.539617372749944,3.84351841630477,3.29874726567922,0,0,0,0,0,0,0.272999822815972,3.11091950298168,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0.491245205065606,0,0.354761064070598,0,0,0,2.0996083214699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.307801034015188,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0.467426619694449,1.10961172300523,0,0.251567901752575,0,0,1.20984739010591,0,0,0,0.449803112163605,0.310525913752519,0,0.53168342911599,1.5652351854352,1.05180326298053,0.380805212168795,0,0.181848659202559,0.429642228169954,0.928067519756987,1.19428766609585,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.593682160298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,1.48863353516788,0,0,1.07140367175657,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 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|phase1_expression=0.54503513781167,2.35510576280081,0.281908808191942,2.00146596706261,3.5756887554183,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0,1.65698687863958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,1.87296046098192,0,0.298897361103602,0.23486899728753,0.647491777472526,0.140450806702248,0,0.122834317311768,0.206651562351531,0,1.23633464639278,0,2.87447256726495,0,0.125118519871964,0,0,0,0.751190294532984,0,0,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,3.60939740834793,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,1.16344544182,0,1.690605505112,0.26593811658487,4.16029747645464,0,0,0,0.428933980974443,1.62786481617433,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0.215627574859517,0.77005821767849,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0.496215615637554,0.153461973288062,1.12264037773229,0.512556597022804,0.511707249066704,0.64341568457443,0,0.462629081407967,0.355123450626254,0.0821271560138091,0.519254429183621,0.697262270759755,0,0,0,0.803701137152247,2.91345868810747,5.50722542829581,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.870100163485371,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,2.2875623270859,0.255897791311334,2.56763392820352,0,0,0.539617372749944,3.84351841630477,3.29874726567922,0,0,0,0,0,0,0.272999822815972,3.11091950298168,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0.491245205065606,0,0.354761064070598,0,0,0,2.0996083214699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.307801034015188,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0.467426619694449,1.10961172300523,0,0.251567901752575,0,0,1.20984739010591,0,0,0,0.449803112163605,0.310525913752519,0,0.53168342911599,1.5652351854352,1.05180326298053,0.380805212168795,0,0.181848659202559,0.429642228169954,0.928067519756987,1.19428766609585,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.593682160298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,1.48863353516788,0,0,1.07140367175657,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p16@SPON2 | |short_description=p16@SPON2 | ||
}} | }} |
Latest revision as of 20:23, 24 September 2015
Short description: | p16@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | -98bp_to_ENST00000509697_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 6.67e-09 | 3 |
enteric smooth muscle cell | 6.94e-09 | 3 |
smooth muscle cell of large intestine | 6.94e-09 | 3 |
smooth muscle cell of colon | 6.94e-09 | 3 |
mesenchymal stem cell of umbilical cord | 8.48e-09 | 6 |
adipocyte of omentum tissue | 1.06e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 8.48e-09 | 6 |
penis | 8.02e-07 | 1 |
intromittent organ | 8.02e-07 | 1 |
lateral plate mesenchyme | 8.02e-07 | 1 |
undifferentiated genital tubercle | 8.02e-07 | 1 |
somatopleure | 8.02e-07 | 1 |