FFCP PHASE1:Hg19::chr5:136834982..136835025,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6695 | |EntrezGene=6695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11251 | |HGNC=11251 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAM7,Q08629 | |UniProt=D6RAM7,Q08629 | ||
|association_with_transcript=0bp_to_ENST00000510689,NM_004598,uc003lbp.2_5end | |association_with_transcript=0bp_to_ENST00000510689,NM_004598,uc003lbp.2_5end | ||
|cluster_id=chr5:136834982..136835025,- | |||
|coexpression_cluster_id=C2803 | |||
|description=CAGE_peak_1_at_SPOCK1_5end | |description=CAGE_peak_1_at_SPOCK1_5end | ||
|id=chr5:136834982..136835025,- | |id=chr5:136834982..136835025,- | ||
|ontology_enrichment_celltype=CL:0000055!1.39e-20!180;CL:0000222!2.91e-12!119;CL:0000680!2.11e-11!57;CL:0000056!2.11e-11!57;CL:0000355!2.11e-11!57;CL:0000187!1.05e-10!54;CL:0000057!1.46e-10!75;CL:0000359!1.69e-10!32;CL:0000183!6.42e-10!59;CL:0000393!8.33e-10!60;CL:0000211!8.33e-10!60;CL:0000192!4.70e-09!42;CL:0000514!4.70e-09!42 | |ontology_enrichment_celltype=CL:0000055!1.39e-20!180;CL:0000222!2.91e-12!119;CL:0000680!2.11e-11!57;CL:0000056!2.11e-11!57;CL:0000355!2.11e-11!57;CL:0000187!1.05e-10!54;CL:0000057!1.46e-10!75;CL:0000359!1.69e-10!32;CL:0000183!6.42e-10!59;CL:0000393!8.33e-10!60;CL:0000211!8.33e-10!60;CL:0000192!4.70e-09!42;CL:0000514!4.70e-09!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.09e-10;32!CL:0000192;5.72e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.81e-12,121;CL:0000680,2.13e-11,58;CL:0000056,2.13e-11,58;CL:0000355,2.13e-11,58;CL:0000057,3.53e-11,76;CL:0000187,1.07e-10,55;CL:0000359,1.26e-10,32;CL:0000393,8.24e-10,61;CL:0000211,8.24e-10,61;CL:0000192,5.21e-09,43;CL:0000514,5.21e-09,43 | |||
|ontology_enrichment_development_v019=CL:0000514;5.72e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.94e-29!194;UBERON:0000483!1.94e-28!309;UBERON:0000119!9.72e-28!312;UBERON:0004111!2.22e-27!241;UBERON:0000477!3.71e-27!286;UBERON:0000475!1.60e-24!365;UBERON:0001049!2.35e-20!57;UBERON:0005068!2.35e-20!57;UBERON:0006241!2.35e-20!57;UBERON:0007135!2.35e-20!57;UBERON:0004872!3.46e-20!84;UBERON:0003075!2.97e-19!86;UBERON:0007284!2.97e-19!86;UBERON:0000468!6.33e-19!659;UBERON:0001981!1.80e-18!60;UBERON:0007500!1.80e-18!60;UBERON:0004537!1.80e-18!60;UBERON:0006965!1.80e-18!60;UBERON:0001637!3.90e-18!42;UBERON:0003509!3.90e-18!42;UBERON:0004572!3.90e-18!42;UBERON:0002616!4.94e-18!59;UBERON:0002346!2.21e-17!90;UBERON:0000073!3.43e-17!94;UBERON:0001016!3.43e-17!94;UBERON:0001017!7.70e-17!82;UBERON:0005743!1.05e-16!86;UBERON:0002049!1.60e-16!79;UBERON:0007798!1.60e-16!79;UBERON:0000055!2.12e-16!69;UBERON:0000955!2.95e-16!69;UBERON:0006238!2.95e-16!69;UBERON:0003080!4.85e-16!42;UBERON:0000467!5.19e-16!625;UBERON:0002780!6.72e-16!41;UBERON:0001890!6.72e-16!41;UBERON:0006240!6.72e-16!41;UBERON:0000480!1.05e-15!626;UBERON:0000481!3.05e-15!347;UBERON:0004573!1.38e-14!33;UBERON:0004571!1.38e-14!33;UBERON:0003056!1.40e-14!61;UBERON:0001893!1.43e-13!34;UBERON:0002020!2.86e-13!34;UBERON:0003528!2.86e-13!34;UBERON:0000033!2.96e-13!123;UBERON:0002791!3.64e-13!33;UBERON:0004121!1.25e-12!169;UBERON:0001869!1.71e-12!32;UBERON:0000153!1.79e-12!129;UBERON:0007811!1.79e-12!129;UBERON:0003914!1.85e-12!118;UBERON:0004535!2.22e-12!110;UBERON:0001009!2.25e-12!113;UBERON:0000922!9.48e-12!612;UBERON:0000924!1.03e-11!173;UBERON:0006601!1.03e-11!173;UBERON:0002050!1.09e-11!605;UBERON:0005423!1.09e-11!605;UBERON:0000923!1.62e-11!604;UBERON:0005291!1.62e-11!604;UBERON:0006598!1.62e-11!604;UBERON:0002532!1.62e-11!604;UBERON:0001134!2.77e-11!61;UBERON:0002036!2.77e-11!61;UBERON:0003082!2.77e-11!61;UBERON:0002385!5.33e-11!63;UBERON:0001015!5.33e-11!63;UBERON:0000383!5.33e-11!63;UBERON:0007023!1.10e-10!115;UBERON:0000956!2.83e-10!25;UBERON:0000203!2.83e-10!25;UBERON:0000486!4.45e-10!82;UBERON:0002619!5.71e-10!22;UBERON:0000490!5.91e-10!138;UBERON:0004290!9.99e-10!70;UBERON:0000914!1.94e-09!83;UBERON:0002329!1.94e-09!83;UBERON:0003077!1.94e-09!83;UBERON:0003059!1.94e-09!83;UBERON:0007282!1.94e-09!83;UBERON:0009618!1.94e-09!83;UBERON:0007285!1.94e-09!83;UBERON:0000064!2.40e-09!219;UBERON:0001950!3.19e-09!20;UBERON:0000947!2.44e-08!21;UBERON:0010191!2.44e-08!21;UBERON:0000948!2.25e-07!24;UBERON:0005498!2.25e-07!24;UBERON:0004140!2.25e-07!24;UBERON:0009881!2.25e-07!24;UBERON:0004141!2.25e-07!24;UBERON:0003084!2.25e-07!24;UBERON:0007005!2.25e-07!24;UBERON:0004139!2.25e-07!24;UBERON:0004291!2.25e-07!24;UBERON:0007100!4.39e-07!27 | |ontology_enrichment_uberon=UBERON:0000025!3.94e-29!194;UBERON:0000483!1.94e-28!309;UBERON:0000119!9.72e-28!312;UBERON:0004111!2.22e-27!241;UBERON:0000477!3.71e-27!286;UBERON:0000475!1.60e-24!365;UBERON:0001049!2.35e-20!57;UBERON:0005068!2.35e-20!57;UBERON:0006241!2.35e-20!57;UBERON:0007135!2.35e-20!57;UBERON:0004872!3.46e-20!84;UBERON:0003075!2.97e-19!86;UBERON:0007284!2.97e-19!86;UBERON:0000468!6.33e-19!659;UBERON:0001981!1.80e-18!60;UBERON:0007500!1.80e-18!60;UBERON:0004537!1.80e-18!60;UBERON:0006965!1.80e-18!60;UBERON:0001637!3.90e-18!42;UBERON:0003509!3.90e-18!42;UBERON:0004572!3.90e-18!42;UBERON:0002616!4.94e-18!59;UBERON:0002346!2.21e-17!90;UBERON:0000073!3.43e-17!94;UBERON:0001016!3.43e-17!94;UBERON:0001017!7.70e-17!82;UBERON:0005743!1.05e-16!86;UBERON:0002049!1.60e-16!79;UBERON:0007798!1.60e-16!79;UBERON:0000055!2.12e-16!69;UBERON:0000955!2.95e-16!69;UBERON:0006238!2.95e-16!69;UBERON:0003080!4.85e-16!42;UBERON:0000467!5.19e-16!625;UBERON:0002780!6.72e-16!41;UBERON:0001890!6.72e-16!41;UBERON:0006240!6.72e-16!41;UBERON:0000480!1.05e-15!626;UBERON:0000481!3.05e-15!347;UBERON:0004573!1.38e-14!33;UBERON:0004571!1.38e-14!33;UBERON:0003056!1.40e-14!61;UBERON:0001893!1.43e-13!34;UBERON:0002020!2.86e-13!34;UBERON:0003528!2.86e-13!34;UBERON:0000033!2.96e-13!123;UBERON:0002791!3.64e-13!33;UBERON:0004121!1.25e-12!169;UBERON:0001869!1.71e-12!32;UBERON:0000153!1.79e-12!129;UBERON:0007811!1.79e-12!129;UBERON:0003914!1.85e-12!118;UBERON:0004535!2.22e-12!110;UBERON:0001009!2.25e-12!113;UBERON:0000922!9.48e-12!612;UBERON:0000924!1.03e-11!173;UBERON:0006601!1.03e-11!173;UBERON:0002050!1.09e-11!605;UBERON:0005423!1.09e-11!605;UBERON:0000923!1.62e-11!604;UBERON:0005291!1.62e-11!604;UBERON:0006598!1.62e-11!604;UBERON:0002532!1.62e-11!604;UBERON:0001134!2.77e-11!61;UBERON:0002036!2.77e-11!61;UBERON:0003082!2.77e-11!61;UBERON:0002385!5.33e-11!63;UBERON:0001015!5.33e-11!63;UBERON:0000383!5.33e-11!63;UBERON:0007023!1.10e-10!115;UBERON:0000956!2.83e-10!25;UBERON:0000203!2.83e-10!25;UBERON:0000486!4.45e-10!82;UBERON:0002619!5.71e-10!22;UBERON:0000490!5.91e-10!138;UBERON:0004290!9.99e-10!70;UBERON:0000914!1.94e-09!83;UBERON:0002329!1.94e-09!83;UBERON:0003077!1.94e-09!83;UBERON:0003059!1.94e-09!83;UBERON:0007282!1.94e-09!83;UBERON:0009618!1.94e-09!83;UBERON:0007285!1.94e-09!83;UBERON:0000064!2.40e-09!219;UBERON:0001950!3.19e-09!20;UBERON:0000947!2.44e-08!21;UBERON:0010191!2.44e-08!21;UBERON:0000948!2.25e-07!24;UBERON:0005498!2.25e-07!24;UBERON:0004140!2.25e-07!24;UBERON:0009881!2.25e-07!24;UBERON:0004141!2.25e-07!24;UBERON:0003084!2.25e-07!24;UBERON:0007005!2.25e-07!24;UBERON:0004139!2.25e-07!24;UBERON:0004291!2.25e-07!24;UBERON:0007100!4.39e-07!27 | ||
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| ||
|short_description=p1@SPOCK1 | |short_description=p1@SPOCK1 | ||
}} | }} |
Latest revision as of 20:51, 24 September 2015
Short description: | p1@SPOCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPOCK1_5end |
Coexpression cluster: | C2803_granulosa_Fibroblast_Smooth_cholangiocellular_Mesenchymal_hepatic_mesenchymal |
Association with transcript: | 0bp_to_ENST00000510689, NM_004598, uc003lbp.2_5end |
EntrezGene: | SPOCK1 |
HGNC: | 11251 |
UniProt: | D6RAM7Q08629 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.81e-12 | 121 |
muscle precursor cell | 2.13e-11 | 58 |
myoblast | 2.13e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.13e-11 | 58 |
fibroblast | 3.53e-11 | 76 |
muscle cell | 1.07e-10 | 55 |
vascular associated smooth muscle cell | 1.26e-10 | 32 |
electrically responsive cell | 8.24e-10 | 61 |
electrically active cell | 8.24e-10 | 61 |
smooth muscle cell | 5.21e-09 | 43 |
smooth muscle myoblast | 5.21e-09 | 43 |