FFCP PHASE1:Hg19::chr16:15950876..15950892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4629 | |EntrezGene=4629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7569 | |HGNC=7569 | ||
|TSSclassifier=strong | |||
|UniProt=P35749,Q3MIV8,B1PS43,Q3MNF1,Q3MNF0,D2JYH7 | |UniProt=P35749,Q3MIV8,B1PS43,Q3MNF1,Q3MNF0,D2JYH7 | ||
|association_with_transcript=0bp_to_ENST00000300036,ENST00000338282,ENST00000396320,ENST00000396324,ENST00000452625,NM_001040113,NM_001040114,NM_002474,NM_022844,uc002ddv.2,uc002ddw.2,uc002ddx.2,uc002ddy.2,uc002deb.3,uc010bvg.2_5end | |association_with_transcript=0bp_to_ENST00000300036,ENST00000338282,ENST00000396320,ENST00000396324,ENST00000452625,NM_001040113,NM_001040114,NM_002474,NM_022844,uc002ddv.2,uc002ddw.2,uc002ddx.2,uc002ddy.2,uc002deb.3,uc010bvg.2_5end | ||
|cluster_id=chr16:15950876..15950892,- | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_1_at_MYH11_5end | |description=CAGE_peak_1_at_MYH11_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.90e-11;82!UBERON:0004872;6.26e-08;7!UBERON:0006603;1.45e-07;65!UBERON:0002532;2.79e-07;206!UBERON:0010316;2.79e-07;206 | |ontology_enrichment_development_v019=UBERON:0006601;4.90e-11;82!UBERON:0004872;6.26e-08;7!UBERON:0006603;1.45e-07;65!UBERON:0002532;2.79e-07;206!UBERON:0010316;2.79e-07;206 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007023;3.89e-24;114!UBERON:0000073;9.48e-16;53!UBERON:0002616;9.48e-16;53!UBERON:0002780;1.56e-15;41!UBERON:0001890;1.56e-15;41!UBERON:0001893;1.84e-12;34!UBERON:0002619;8.34e-12;22!UBERON:0003528;1.35e-11;34!UBERON:0002020;1.35e-11;34!UBERON:0001869;3.11e-11;32!UBERON:0002791;3.27e-11;32!UBERON:0001950;3.72e-10;20!UBERON:0000956;6.13e-10;25!UBERON:0000203;6.13e-10;25!UBERON:0000955;4.02e-09;68!UBERON:0001017;8.89e-09;75!UBERON:0001016;2.92e-08;83!UBERON:0004732;4.43e-08;13!UBERON:0001894;6.10e-08;7!UBERON:0002298;1.22e-07;6!UBERON:0011216;1.97e-07;132!UBERON:0004733;4.11e-07;12!UBERON:0002028;4.11e-07;12!UBERON:0004921;8.93e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0007023;3.89e-24;114!UBERON:0000073;9.48e-16;53!UBERON:0002616;9.48e-16;53!UBERON:0002780;1.56e-15;41!UBERON:0001890;1.56e-15;41!UBERON:0001893;1.84e-12;34!UBERON:0002619;8.34e-12;22!UBERON:0003528;1.35e-11;34!UBERON:0002020;1.35e-11;34!UBERON:0001869;3.11e-11;32!UBERON:0002791;3.27e-11;32!UBERON:0001950;3.72e-10;20!UBERON:0000956;6.13e-10;25!UBERON:0000203;6.13e-10;25!UBERON:0000955;4.02e-09;68!UBERON:0001017;8.89e-09;75!UBERON:0001016;2.92e-08;83!UBERON:0004732;4.43e-08;13!UBERON:0001894;6.10e-08;7!UBERON:0002298;1.22e-07;6!UBERON:0011216;1.97e-07;132!UBERON:0004733;4.11e-07;12!UBERON:0002028;4.11e-07;12!UBERON:0004921;8.93e-07;33 | ||
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| ||
|short_description=p1@MYH11 | |short_description=p1@MYH11 | ||
}} | }} |
Latest revision as of 21:10, 24 September 2015
Short description: | p1@MYH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYH11_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_ENST00000300036, ENST00000338282, ENST00000396320, ENST00000396324, ENST00000452625, NM_001040113, NM_001040114, NM_002474, NM_022844, uc002ddv.2, uc002ddw.2, uc002ddx.2, uc002ddy.2, uc002deb.3, uc010bvg.2_5end |
EntrezGene: | MYH11 |
HGNC: | 7569 |
UniProt: | P35749Q3MIV8B1PS43Q3MNF1Q3MNF0D2JYH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data