FFCP PHASE1:Hg19::chr8:102700989..102701034,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:102700989..102701034,-
|short_description=p7@NCALD
|description=CAGE_peak_7_at_NCALD_5end
|association_with_transcript=-349bp_to_BC009949_5end
|EntrezGene...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83988 | |EntrezGene=83988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7655 | |HGNC=7655 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-349bp_to_BC009949_5end | |||
|cluster_id=chr8:102700989..102701034,- | |||
|description=CAGE_peak_7_at_NCALD_5end | |||
|id=chr8:102700989..102701034,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.61e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!4.36e-26!22;UBERON:0001893!6.06e-26!34;UBERON:0003080!2.54e-25!42;UBERON:0002791!1.04e-24!33;UBERON:0002780!5.65e-24!41;UBERON:0001890!5.65e-24!41;UBERON:0006240!5.65e-24!41;UBERON:0002020!7.02e-24!34;UBERON:0003528!7.02e-24!34;UBERON:0001869!7.12e-24!32;UBERON:0001950!2.61e-23!20;UBERON:0000956!2.69e-22!25;UBERON:0000203!2.69e-22!25;UBERON:0001049!5.85e-22!57;UBERON:0005068!5.85e-22!57;UBERON:0006241!5.85e-22!57;UBERON:0007135!5.85e-22!57;UBERON:0007023!1.56e-20!115;UBERON:0002616!3.50e-19!59;UBERON:0000955!1.99e-17!69;UBERON:0006238!1.99e-17!69;UBERON:0003056!3.33e-17!61;UBERON:0001017!1.99e-16!82;UBERON:0005743!2.94e-16!86;UBERON:0000073!1.04e-13!94;UBERON:0001016!1.04e-13!94;UBERON:0003075!3.71e-13!86;UBERON:0007284!3.71e-13!86;UBERON:0000153!2.47e-12!129;UBERON:0007811!2.47e-12!129;UBERON:0002346!3.87e-12!90;UBERON:0000033!5.97e-12!123;UBERON:0001872!4.12e-09!5;UBERON:0002021!4.86e-09!5;UBERON:0004121!5.44e-08!169;UBERON:0000200!1.45e-07!6;UBERON:0000924!1.50e-07!173;UBERON:0006601!1.50e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.65e-24;5!UBERON:0001950;5.77e-16;20!UBERON:0002619;1.41e-14;22!UBERON:0007029;1.61e-14;1!UBERON:0001831;1.61e-14;1!UBERON:0001567;1.61e-14;1!UBERON:0000956;6.77e-13;25!UBERON:0000203;6.77e-13;25!UBERON:0002791;2.01e-10;32!UBERON:0001869;2.01e-10;32!UBERON:0000200;4.75e-10;6!UBERON:0002771;3.56e-08;2!UBERON:0002702;4.08e-08;2!UBERON:0001893;4.53e-08;34!UBERON:0003528;4.63e-08;34!UBERON:0002020;4.63e-08;34!UBERON:0001829;6.57e-08;2!UBERON:0004089;6.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.41e-24,5;UBERON:0001950,5.26e-16,20;UBERON:0002619,1.29e-14,22;UBERON:0007029,1.41e-14,1;UBERON:0001831,2.41e-14,1;UBERON:0001567,2.41e-14,1;UBERON:0008801,2.41e-14,1;UBERON:0000956,6.29e-13,25;UBERON:0000203,6.29e-13,25;UBERON:0002791,3.54e-10,32;UBERON:0001869,3.54e-10,32;UBERON:0000200,4.54e-10,6;UBERON:0003528,1.36e-09,34;UBERON:0002020,1.36e-09,34;UBERON:0001893,1.36e-09,34;UBERON:0001049,3.35e-08,56;UBERON:0005068,3.35e-08,56;UBERON:0006241,3.35e-08,56;UBERON:0007135,3.35e-08,56;UBERON:0002771,3.56e-08,2;UBERON:0002702,3.82e-08,2;UBERON:0002780,5.58e-08,41;UBERON:0001890,5.58e-08,41;UBERON:0003080,5.58e-08,41;UBERON:0006240,5.58e-08,41;UBERON:0001829,8.04e-08,2;UBERON:0004089,8.04e-08,2;UBERON:0001017,2.16e-07,81 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.57470412614962,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0.260118695119756,0.493313713811028,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0.503760491138201,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0,0.123084805461069,0,0,0,0,0,0,0,1.93866549219044,0.834912883456661,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,1.21491816834592,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0.50648636764703,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,2.65820453990096,5.24712939078442,0.3755727921195,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.159633859057151,2.2562800066483,1.51243017733031,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0.327543835020193,0,0.337687923091973,0.781078098613847,0.413373593002368,0.507326481551255,0.546974809018219,1.09651553371436,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0.460935950223117,0,0,0.591954962065642,0,0,0,0.314231179832004,0,1.82631744101899,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0.437119121007915,1.41095188908457,0.490296643507811,0,0,0,2.113278637917,0,0,0.128915775947154,0.399764623699716,0,0,0,0,0.458729283404541,0.286679166302903,0,0.611923411718232,1.74540276136151,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.0645889098360061,0,0.224263725161227,0,0.202117188958219,0.217716747896961,1.02669990325584,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.57470412614962,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0.260118695119756,0.493313713811028,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0.503760491138201,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0,0.123084805461069,0,0,0,0,0,0,0,1.93866549219044,0.834912883456661,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,1.21491816834592,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0.50648636764703,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,2.65820453990096,5.24712939078442,0.3755727921195,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.159633859057151,2.2562800066483,1.51243017733031,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0.327543835020193,0,0.337687923091973,0.781078098613847,0.413373593002368,0.507326481551255,0.546974809018219,1.09651553371436,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0.460935950223117,0,0,0.591954962065642,0,0,0,0.314231179832004,0,1.82631744101899,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0.437119121007915,1.41095188908457,0.490296643507811,0,0,0,2.113278637917,0,0,0.128915775947154,0.399764623699716,0,0,0,0,0.458729283404541,0.286679166302903,0,0.611923411718232,1.74540276136151,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.0645889098360061,0,0.224263725161227,0,0.202117188958219,0.217716747896961,1.02669990325584,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p7@NCALD | |||
}} | }} |
Latest revision as of 21:43, 24 September 2015
Short description: | p7@NCALD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NCALD_5end |
Coexpression cluster: | NA |
Association with transcript: | -349bp_to_BC009949_5end |
EntrezGene: | NCALD |
HGNC: | 7655 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.41e-24 | 5 |
neocortex | 5.26e-16 | 20 |
regional part of cerebral cortex | 1.29e-14 | 22 |
surface | 1.41e-14 | 1 |
parotid gland | 2.41e-14 | 1 |
cheek | 2.41e-14 | 1 |
parotid gland primordium | 2.41e-14 | 1 |
cerebral cortex | 6.29e-13 | 25 |
pallium | 6.29e-13 | 25 |
regional part of telencephalon | 3.54e-10 | 32 |
cerebral hemisphere | 3.54e-10 | 32 |
gyrus | 4.54e-10 | 6 |
brain grey matter | 1.36e-09 | 34 |
gray matter | 1.36e-09 | 34 |
telencephalon | 1.36e-09 | 34 |
neural tube | 3.35e-08 | 56 |
neural rod | 3.35e-08 | 56 |
future spinal cord | 3.35e-08 | 56 |
neural keel | 3.35e-08 | 56 |
middle temporal gyrus | 3.56e-08 | 2 |
middle frontal gyrus | 3.82e-08 | 2 |
regional part of forebrain | 5.58e-08 | 41 |
forebrain | 5.58e-08 | 41 |
anterior neural tube | 5.58e-08 | 41 |
future forebrain | 5.58e-08 | 41 |
major salivary gland | 8.04e-08 | 2 |
midface | 8.04e-08 | 2 |
central nervous system | 2.16e-07 | 81 |