FFCP PHASE1:Hg19::chr8:102987548..102987571,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:102987548..102987571,-
|short_description=p4@NCALD
|description=CAGE_peak_4_at_NCALD_5end
|association_with_transcript=0bp_to_ENST00000520690_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83988 | |EntrezGene=83988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7655 | |HGNC=7655 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIZ1 | |UniProt=E5RIZ1 | ||
|association_with_transcript=0bp_to_ENST00000520690_5end | |||
|cluster_id=chr8:102987548..102987571,- | |||
|coexpression_cluster_id=C1120 | |||
|description=CAGE_peak_4_at_NCALD_5end | |||
|id=chr8:102987548..102987571,- | |||
|ontology_enrichment_celltype=CL:0000945!8.28e-17!24;CL:0000826!8.28e-17!24;CL:0000838!1.78e-10!52;CL:0000542!3.28e-10!53;CL:0000051!3.28e-10!53;CL:0000785!3.48e-07!2;CL:0000955!3.48e-07!2;CL:0000818!3.48e-07!2;CL:0000954!3.48e-07!2;CL:0000816!3.48e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.17e-20;24!CL:0000542;3.90e-10;53!CL:0000946;1.56e-09;1!CL:0000786;1.56e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.17e-20,24;CL:0000826,1.17e-20,24;CL:0000838,3.11e-17,52;CL:0000542,7.13e-17,53;CL:0000051,7.13e-17,53;CL:0000946,1.43e-09,1;CL:0000786,1.43e-09,1;CL:0000980,1.43e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000051;3.90e-10;53!UBERON:0009143;3.98e-09;1!UBERON:0001045;3.98e-09;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.00e-19!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.79e-29;10!DOID:0060060;9.43e-10;1!DOID:0060061;9.43e-10;1!DOID:8691;9.43e-10;1!DOID:2355;3.98e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.30e-29,10;DOID:0060060,9.44e-10,1;DOID:0060061,9.44e-10,1;DOID:8691,9.44e-10,1;DOID:2355,4.15e-09,1;DOID:2531,4.37e-07,51;DOID:0060083,4.37e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000974!3.37e-10!10;UBERON:0001042!1.48e-07!10;UBERON:0009145!1.48e-07!10;UBERON:0003343!4.64e-07!4;UBERON:0004785!4.64e-07!4;UBERON:0004177!6.58e-07!7;UBERON:0006562!7.79e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.98e-09;1!UBERON:0001154;3.98e-09;1!UBERON:0001153;3.98e-09;1!UBERON:0009854;3.98e-09;1!UBERON:0001961;3.98e-09;1!UBERON:0001744;3.98e-09;1!UBERON:0001042;3.98e-09;1!UBERON:0001735;3.98e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,3.00e-09,1;UBERON:0001153,3.00e-09,1;UBERON:0001045,3.00e-09,1;UBERON:0002372,3.25e-09,1;UBERON:0001961,3.25e-09,1;UBERON:0001744,3.25e-09,1;UBERON:0001735,3.25e-09,1;UBERON:0001042,1.42e-07,10;UBERON:0009145,1.42e-07,10;UBERON:0006562,6.31e-07,11 | |||
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| ||
|short_description=p4@NCALD | |||
}} | }} |
Latest revision as of 21:47, 24 September 2015
Short description: | p4@NCALD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NCALD_5end |
Coexpression cluster: | C1120_adult_hairy_mycosis_B_plasma_CD4_cord |
Association with transcript: | 0bp_to_ENST00000520690_5end |
EntrezGene: | NCALD |
HGNC: | 7655 |
UniProt: | E5RIZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.17e-20 | 24 |
pro-B cell | 1.17e-20 | 24 |
lymphoid lineage restricted progenitor cell | 3.11e-17 | 52 |
lymphocyte | 7.13e-17 | 53 |
common lymphoid progenitor | 7.13e-17 | 53 |
antibody secreting cell | 1.43e-09 | 1 |
plasma cell | 1.43e-09 | 1 |
plasmablast | 1.43e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 3.00e-09 | 1 |
caecum | 3.00e-09 | 1 |
midgut | 3.00e-09 | 1 |
tonsil | 3.25e-09 | 1 |
mucosa-associated lymphoid tissue | 3.25e-09 | 1 |
lymphoid tissue | 3.25e-09 | 1 |
tonsillar ring | 3.25e-09 | 1 |
chordate pharynx | 1.42e-07 | 10 |
pharyngeal region of foregut | 1.42e-07 | 10 |
pharynx | 6.31e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.30e-29 | 10 |
non-Hodgkin lymphoma | 9.44e-10 | 1 |
cutaneous T cell lymphoma | 9.44e-10 | 1 |
mycosis fungoides | 9.44e-10 | 1 |
anemia | 4.15e-09 | 1 |
hematologic cancer | 4.37e-07 | 51 |
immune system cancer | 4.37e-07 | 51 |