FFCP PHASE1:Hg19::chr14:61929948..61929975,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:61929948..61929975,+ to FFCP PHASE1:Hg19::chr14:61929948..61929975,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5583 | |EntrezGene=5583 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |HGNC=9403 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=161bp_to_ENST00000555233_5end | |||
|cluster_id=chr14:61929948..61929975,+ | |||
|description=CAGE_peak_20_at_PRKCH_5end | |||
|id=chr14:61929948..61929975,+ | |||
|ontology_enrichment_celltype=CL:0000680!1.28e-10!57;CL:0000056!1.28e-10!57;CL:0000355!1.28e-10!57;CL:0000188!2.27e-10!9;CL:0000187!2.40e-10!54;CL:0000055!7.14e-10!180;CL:0000183!4.93e-09!59;CL:0000393!8.46e-09!60;CL:0000211!8.46e-09!60;CL:0000708!1.82e-07!3;CL:0000594!6.04e-07!3;CL:0000222!6.21e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002494;1.36e-34;16!CL:0002548;1.64e-33;6!CL:0000746;1.26e-30;3!CL:0000342;2.09e-23;1!CL:0002565;2.09e-23;1!CL:0000737;2.94e-23;4!CL:0002557;4.10e-23;1!CL:0000708;1.30e-08;3!CL:0002590;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.36e-34,16;CL:0002548,1.64e-33,6;CL:0000746,1.26e-30,3;CL:0000513,1.26e-30,3;CL:0000342,2.10e-23,1;CL:0002565,2.10e-23,1;CL:0000737,2.94e-23,4;CL:0002557,4.10e-23,1;CL:0000708,1.21e-08,3;CL:0002590,1.40e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000513;1.26e-30;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.44e-09!61;UBERON:0002036!1.44e-09!61;UBERON:0003082!1.44e-09!61;UBERON:0007625!1.63e-09!11;UBERON:0002200!1.70e-09!11;UBERON:0006876!1.70e-09!11;UBERON:0002385!4.28e-09!63;UBERON:0001015!4.28e-09!63;UBERON:0000383!4.28e-09!63;UBERON:0004290!1.56e-08!70;UBERON:0000019!6.98e-08!19;UBERON:0000047!6.98e-08!19;UBERON:0004088!6.98e-08!19;UBERON:0003072!6.98e-08!19;UBERON:0003071!6.98e-08!19;UBERON:0004128!6.98e-08!19;UBERON:0003210!1.82e-07!3;UBERON:0000970!2.15e-07!20;UBERON:0000914!4.36e-07!83;UBERON:0002329!4.36e-07!83;UBERON:0003077!4.36e-07!83;UBERON:0003059!4.36e-07!83;UBERON:0007282!4.36e-07!83;UBERON:0009618!4.36e-07!83;UBERON:0007285!4.36e-07!83;UBERON:0002104!5.96e-07!21;UBERON:0001456!5.96e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;2.90e-25;22!UBERON:0002506;2.09e-23;1!UBERON:0001769;2.09e-23;1!UBERON:0007100;2.85e-22;25!UBERON:0000078;2.90e-12;2!UBERON:0002012;2.90e-12;2!UBERON:0008886;2.90e-12;2!UBERON:0006876;5.63e-09;11!UBERON:0003210;1.30e-08;3!UBERON:0000488;7.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,5.54e-33,24;UBERON:0005498,5.54e-33,24;UBERON:0004140,5.54e-33,24;UBERON:0009881,5.54e-33,24;UBERON:0004141,5.54e-33,24;UBERON:0003084,5.54e-33,24;UBERON:0007005,5.54e-33,24;UBERON:0004139,5.54e-33,24;UBERON:0004291,5.54e-33,24;UBERON:0007100,2.42e-29,27;UBERON:0002506,2.10e-23,1;UBERON:0001769,2.10e-23,1;UBERON:0004535,9.49e-13,109;UBERON:0001009,2.11e-12,112;UBERON:0000078,2.90e-12,2;UBERON:0007497,2.90e-12,2;UBERON:0003643,2.90e-12,2;UBERON:0003504,2.90e-12,2;UBERON:0003469,2.90e-12,2;UBERON:0003496,2.90e-12,2;UBERON:0002012,2.90e-12,2;UBERON:0008886,2.90e-12,2;UBERON:0007303,2.90e-12,2;UBERON:0002061,2.90e-12,2;UBERON:0005432,2.90e-12,2;UBERON:0004363,2.90e-12,2;UBERON:0003103,1.05e-11,68;UBERON:0004872,1.38e-09,83;UBERON:0006876,5.87e-09,11;UBERON:0003210,1.21e-08,3;UBERON:0004145,1.30e-08,3;UBERON:0010314,5.34e-08,132;UBERON:0000488,7.70e-07,4;UBERON:0003914,8.98e-07,117 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,9.38981203585091,3.70801429346238,0,0,0,0,0,0,0.665188192387692,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,5.29058760179603,1.21239604862719,1.9615428373615,0.302714855289863,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,1.58805056424029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40194934417936,0,0,0,0,0,0,0,0.463721619900307,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,1.74384027533312,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0.65147236858747,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.0915694648183434,0,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0.537101224341368,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,1.58189712359363,0.38126038784765,0,0,0.95460974377781,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.403100834920358,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0.761610424337591,0.406870733204662,0.181848659202559,0,0,0.796191777397232,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0.353378291891762,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,9.38981203585091,3.70801429346238,0,0,0,0,0,0,0.665188192387692,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,5.29058760179603,1.21239604862719,1.9615428373615,0.302714855289863,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,1.58805056424029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40194934417936,0,0,0,0,0,0,0,0.463721619900307,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,1.74384027533312,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0.65147236858747,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.0915694648183434,0,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0.537101224341368,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,1.58189712359363,0.38126038784765,0,0,0.95460974377781,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.403100834920358,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0.761610424337591,0.406870733204662,0.181848659202559,0,0,0.796191777397232,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0.353378291891762,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p20@PRKCH | |||
}} | }} |
Latest revision as of 22:00, 24 September 2015
Short description: | p20@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PRKCH_5end |
Coexpression cluster: | NA |
Association with transcript: | 161bp_to_ENST00000555233_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.36e-34 | 16 |
cardiac fibroblast | 1.64e-33 | 6 |
cardiac muscle cell | 1.26e-30 | 3 |
cardiac muscle myoblast | 1.26e-30 | 3 |
pigment cell (sensu Vertebrata) | 2.10e-23 | 1 |
iris pigment epithelial cell | 2.10e-23 | 1 |
striated muscle cell | 2.94e-23 | 4 |
fibroblast of pulmonary artery | 4.10e-23 | 1 |
leptomeningeal cell | 1.21e-08 | 3 |
smooth muscle cell of the brain vasculature | 1.40e-08 | 3 |