FFCP PHASE1:Hg19::chr22:42148573..42148591,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=150365 | |EntrezGene=150365 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28613 | |HGNC=28613 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000476614_5end | |association_with_transcript=52bp_to_ENST00000476614_5end | ||
|cluster_id=chr22:42148573..42148591,+ | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_5_at_MEI1_5end | |description=CAGE_peak_5_at_MEI1_5end | ||
|id=chr22:42148573..42148591,+ | |id=chr22:42148573..42148591,+ | ||
|ontology_enrichment_celltype=CL:0000236!5.38e-23!14;CL:0000945!1.13e-22!24;CL:0000826!1.13e-22!24;CL:0000838!7.84e-13!52;CL:0000542!1.57e-12!53;CL:0000051!1.57e-12!53 | |ontology_enrichment_celltype=CL:0000236!5.38e-23!14;CL:0000945!1.13e-22!24;CL:0000826!1.13e-22!24;CL:0000838!7.84e-13!52;CL:0000542!1.57e-12!53;CL:0000051!1.57e-12!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.56e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.46e-10,14;CL:0000838,2.29e-07,52;CL:0000542,3.16e-07,53;CL:0000051,3.16e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.41e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-23!115;UBERON:0001829!1.73e-09!2;UBERON:0001044!5.17e-07!6;UBERON:0003293!5.17e-07!6;UBERON:0003294!5.17e-07!6;UBERON:0010047!5.17e-07!6;UBERON:0000167!5.17e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.41e-16;1!UBERON:0000029;1.41e-16;1!UBERON:0001831;1.41e-16;1!UBERON:0001961;1.41e-16;1!UBERON:0001744;1.41e-16;1!UBERON:0001042;1.41e-16;1!UBERON:0001567;1.41e-16;1!UBERON:0001735;1.41e-16;1!UBERON:0001044;3.95e-11;6!UBERON:0003293;3.95e-11;6!UBERON:0003294;3.95e-11;6!UBERON:0010047;3.95e-11;6!UBERON:0003408;3.95e-11;6!UBERON:0000167;3.95e-11;6!UBERON:0000341;5.93e-09;2!UBERON:0006562;5.93e-09;2!UBERON:0001829;5.93e-09;2!UBERON:0004089;5.93e-09;2!UBERON:0000161;7.99e-08;19!UBERON:0000166;7.99e-08;19!UBERON:0002465;4.95e-07;10!UBERON:0004921;8.85e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,7.57e-17,1;UBERON:0001961,7.57e-17,1;UBERON:0001744,7.57e-17,1;UBERON:0001735,7.57e-17,1;UBERON:0000029,1.04e-16,1;UBERON:0001831,3.07e-16,1;UBERON:0001567,3.07e-16,1;UBERON:0008801,3.07e-16,1;UBERON:0001044,5.09e-11,6;UBERON:0003293,5.09e-11,6;UBERON:0003294,5.09e-11,6;UBERON:0010047,5.09e-11,6;UBERON:0000167,5.09e-11,6;UBERON:0000341,4.70e-09,2;UBERON:0001829,8.74e-09,2;UBERON:0004089,8.74e-09,2;UBERON:0002465,4.13e-07,10;UBERON:0003408,5.76e-07,10;UBERON:0000166,8.10e-07,22 | |||
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| ||
|short_description=p5@MEI1 | |short_description=p5@MEI1 | ||
}} | }} |
Latest revision as of 22:27, 24 September 2015
Short description: | p5@MEI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MEI1_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | 52bp_to_ENST00000476614_5end |
EntrezGene: | MEI1 |
HGNC: | 28613 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.46e-10 | 14 |
lymphoid lineage restricted progenitor cell | 2.29e-07 | 52 |
lymphocyte | 3.16e-07 | 53 |
common lymphoid progenitor | 3.16e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
tonsil | 7.57e-17 | 1 |
mucosa-associated lymphoid tissue | 7.57e-17 | 1 |
lymphoid tissue | 7.57e-17 | 1 |
tonsillar ring | 7.57e-17 | 1 |
lymph node | 1.04e-16 | 1 |
parotid gland | 3.07e-16 | 1 |
cheek | 3.07e-16 | 1 |
parotid gland primordium | 3.07e-16 | 1 |
saliva-secreting gland | 5.09e-11 | 6 |
gland of oral region | 5.09e-11 | 6 |
gland of foregut | 5.09e-11 | 6 |
oral gland | 5.09e-11 | 6 |
oral cavity | 5.09e-11 | 6 |
throat | 4.70e-09 | 2 |
major salivary gland | 8.74e-09 | 2 |
midface | 8.74e-09 | 2 |
lymphoid system | 4.13e-07 | 10 |
gland of gut | 5.76e-07 | 10 |
oral opening | 8.10e-07 | 22 |